NuPIC Studio is an all­-in-­one tool that allows users create a HTM neural network from scratch

Overview

NuPIC Studio Logo NuPIC Studio *nix Build Status

NuPIC Studio is an all­-in-­one tool that allows users create a HTM neural network from scratch, train it, collect statistics, and share it among the members of the community. It is not just a visualization tool but an HTM builder, debugger and laboratory for experiments. It is ideal for newbies with little intimacy with NuPIC code as well as experts that wish a better productivity. Among its features and advantages:

  • Users can open, save, or change their "HTM projects" or of other developers. A typical project contains data to be trained, neural network configuration, statistics, etc, which can be shared to be analysed or integrated with other projects.
  • The HTM engine is the own original NuPIC libray (Python distribution). This means no port, no bindings, no re-implementation, etc. So any changes in the original nupic source can be immediatedly viewed. This helps users that wish test improvements like new encoders or even hierarchy, attention, and motor integration.

Screenshot

For more information, see numenta.org or the NuPIC Studio wiki.

Installation

Currently supported platforms:

  • Windows
  • Linux (32/64bit)
  • Mac OSX

Dependencies:

  • Python (2.7 or later)
  • PIP
  • NuPIC
  • NumPy
  • PyQt5

User instructions

If you want only use it, simply do this:

pip install nupic_studio

Note: Dear *nix users, if you get a "permission denied" error when using pip, you may add the --user flag to install to a location in your home directory, which should resolve any permissions issues. Doing this, you may need to add this location to your PATH and PYTHONPATH. Alternatively, you can run pip with 'sudo'.

Once it is installed, you can execute the app using:

nupic_studio

and then click on Open Project button to open any example to getting started with NuPIC.

Developer instructions

If you want develop, debug, or simply test NuPIC Studio, clone it and follow the instructions:

Using command line

This assumes the NUPIC_STUDIO environment variable is set to the directory where the NuPIC Studio source code exists.

cd $NUPIC_STUDIO
python setup.py build
python setup.py develop

Using an IDE

The following instructions will work in the most Python IDEs:

  • Open your IDE.
  • Open a project specifying the $NUPIC_STUDIO repository folder as location.
  • Click with mouse right button on setup.py file listed on project files and select Run command on pop-up menu. This will call the build process. Check output panel to see the result.
  • If the build was successful, just click on program.py and voilà!

If you don't have a favourite Python IDE, this article can help you to choose one: http://pedrokroger.net/choosing-best-python-ide/

Comments
  • Fatal Python error: PyThreadState_Get: no current thread

    Fatal Python error: PyThreadState_Get: no current thread

    Hello,

    I have installed nustudio successfully on OS X Yosemite, but when I run it I get the following hard crash: nustudio Fatal Python error: PyThreadState_Get: no current thread zsh: abort nustudio

    I had a hard time installing all the dependencies under Yosemite first I tried macports then switched to homebrew. After much problems, homebrew now seems to be working correctly on my system. One of the other posts suggested that the libray links might not match the version of Python running on my system, but that doesn't seem to be an issue with mine.

    python Python 2.7.9 (default, Jan 31 2015, 04:25:24) [GCC 4.2.1 Compatible Apple LLVM 6.0 (clang-600.0.56)] on darwin Type "help", "copyright", "credits" or "license" for more information.

    I also have the dump from the crash:

    Process: Python [35875] Path: /usr/local/Cellar/python/2.7.9/Frameworks/Python.framework/Versions/2.7/Resources/Python.app/Contents/MacOS/Python Identifier: Python Version: 2.7.9 (2.7.9) Code Type: X86-64 (Native) Parent Process: zsh [29366] Responsible: iTerm [1067] User ID: 501

    Date/Time: 2015-02-09 08:11:03.495 -0500 OS Version: Mac OS X 10.10.2 (14C109) Report Version: 11 Anonymous UUID: B16CB0A6-AA57-F152-BD5F-1A012A1D4EFD

    Sleep/Wake UUID: 42BA06E0-4BEB-42D6-8BA9-73096ED11DCD

    Time Awake Since Boot: 300000 seconds Time Since Wake: 1600 seconds

    Crashed Thread: 0 Dispatch queue: com.apple.main-thread

    Exception Type: EXC_CRASH (SIGABRT) Exception Codes: 0x0000000000000000, 0x0000000000000000

    Application Specific Information: abort() called

    Thread 0 Crashed:: Dispatch queue: com.apple.main-thread 0 libsystem_kernel.dylib 0x00007fff9262c286 pthread_kill + 10 1 libsystem_c.dylib 0x00007fff8b0edb53 abort + 129 2 org.python.python 0x000000010f12e901 Py_FatalError + 49 3 org.python.python 0x000000010f12d96c PyThreadState_Get + 44 4 org.python.python 0x000000010f129cbb Py_InitModule4_64 + 75 5 _math.so 0x000000010ebc8e95 init_math + 687 6 org.python.python 0x000000010b2302f7 _PyImport_LoadDynamicModule + 140 7 org.python.python 0x000000010b22ec1a imp_load_module + 243 8 org.python.python 0x000000010b21b80e PyEval_EvalFrameEx + 14392 9 org.python.python 0x000000010b21e656 fast_function + 262 10 org.python.python 0x000000010b21b428 PyEval_EvalFrameEx + 13394 11 org.python.python 0x000000010b217da2 PyEval_EvalCodeEx + 1409 12 org.python.python 0x000000010b21781b PyEval_EvalCode + 54 13 org.python.python 0x000000010b22c85e PyImport_ExecCodeModuleEx + 241 14 org.python.python 0x000000010b22f53e load_source_module + 1091 15 org.python.python 0x000000010b22ffdf import_submodule + 270 16 org.python.python 0x000000010b22fba9 load_next + 280 17 org.python.python 0x000000010b22dde9 PyImport_ImportModuleLevel + 1191 18 org.python.python 0x000000010b213403 builtin___import + 135 19 org.python.python 0x000000010b19e19a PyObject_Call + 99 20 org.python.python 0x000000010b21ddb3 PyEval_CallObjectWithKeywords + 93 21 org.python.python 0x000000010b21a08d PyEval_EvalFrameEx + 8375 22 org.python.python 0x000000010b217da2 PyEval_EvalCodeEx + 1409 23 org.python.python 0x000000010b21781b PyEval_EvalCode + 54 24 org.python.python 0x000000010b22c85e PyImport_ExecCodeModuleEx + 241 25 org.python.python 0x000000010b22f53e load_source_module + 1091 26 org.python.python 0x000000010b22ffdf import_submodule + 270 27 org.python.python 0x000000010b22fba9 load_next + 280 28 org.python.python 0x000000010b22dde9 PyImport_ImportModuleLevel + 1191 29 org.python.python 0x000000010b213403 builtin___import__ + 135 30 org.python.python 0x000000010b19e19a PyObject_Call + 99 31 org.python.python 0x000000010b21ddb3 PyEval_CallObjectWithKeywords + 93 32 org.python.python 0x000000010b21a08d PyEval_EvalFrameEx + 8375 33 org.python.python 0x000000010b217da2 PyEval_EvalCodeEx + 1409 34 org.python.python 0x000000010b21781b PyEval_EvalCode + 54 35 org.python.python 0x000000010b22c85e PyImport_ExecCodeModuleEx + 241 36 org.python.python 0x000000010b22f53e load_source_module + 1091 37 org.python.python 0x000000010b22ffdf import_submodule + 270 38 org.python.python 0x000000010b22fba9 load_next + 280 39 org.python.python 0x000000010b22dde9 PyImport_ImportModuleLevel + 1191 40 org.python.python 0x000000010b213403 builtin___import__ + 135 41 org.python.python 0x000000010b19e19a PyObject_Call + 99 42 org.python.python 0x000000010b21ddb3 PyEval_CallObjectWithKeywords + 93 43 org.python.python 0x000000010b21a08d PyEval_EvalFrameEx + 8375 44 org.python.python 0x000000010b217da2 PyEval_EvalCodeEx + 1409 45 org.python.python 0x000000010b21781b PyEval_EvalCode + 54 46 org.python.python 0x000000010b22c85e PyImport_ExecCodeModuleEx + 241 47 org.python.python 0x000000010b22f53e load_source_module + 1091 48 org.python.python 0x000000010b22ffdf import_submodule + 270 49 org.python.python 0x000000010b22fba9 load_next + 280 50 org.python.python 0x000000010b22dde9 PyImport_ImportModuleLevel + 1191 51 org.python.python 0x000000010b213403 builtin___import__ + 135 52 org.python.python 0x000000010b19e19a PyObject_Call + 99 53 org.python.python 0x000000010b21ddb3 PyEval_CallObjectWithKeywords + 93 54 org.python.python 0x000000010b21a08d PyEval_EvalFrameEx + 8375 55 org.python.python 0x000000010b217da2 PyEval_EvalCodeEx + 1409 56 org.python.python 0x000000010b21781b PyEval_EvalCode + 54 57 org.python.python 0x000000010b22c85e PyImport_ExecCodeModuleEx + 241 58 org.python.python 0x000000010b22f53e load_source_module + 1091 59 org.python.python 0x000000010b22ffdf import_submodule + 270 60 org.python.python 0x000000010b22fba9 load_next + 280 61 org.python.python 0x000000010b22dde9 PyImport_ImportModuleLevel + 1191 62 org.python.python 0x000000010b213403 builtin___import__ + 135 63 org.python.python 0x000000010b21c211 PyEval_EvalFrameEx + 16955 64 org.python.python 0x000000010b217da2 PyEval_EvalCodeEx + 1409 65 org.python.python 0x000000010b21e5c5 fast_function + 117 66 org.python.python 0x000000010b21b428 PyEval_EvalFrameEx + 13394 67 org.python.python 0x000000010b217da2 PyEval_EvalCodeEx + 1409 68 org.python.python 0x000000010b21e5c5 fast_function + 117 69 org.python.python 0x000000010b21b428 PyEval_EvalFrameEx + 13394 70 org.python.python 0x000000010b217da2 PyEval_EvalCodeEx + 1409 71 org.python.python 0x000000010b21e5c5 fast_function + 117 72 org.python.python 0x000000010b21b428 PyEval_EvalFrameEx + 13394 73 org.python.python 0x000000010b217da2 PyEval_EvalCodeEx + 1409 74 org.python.python 0x000000010b21e5c5 fast_function + 117 75 org.python.python 0x000000010b21b428 PyEval_EvalFrameEx + 13394 76 org.python.python 0x000000010b217da2 PyEval_EvalCodeEx + 1409 77 org.python.python 0x000000010b21781b PyEval_EvalCode + 54 78 org.python.python 0x000000010b2378ca run_mod + 53 79 org.python.python 0x000000010b23796d PyRun_FileExFlags + 133 80 org.python.python 0x000000010b23750a PyRun_SimpleFileExFlags + 769 81 org.python.python 0x000000010b248c83 Py_Main + 3051 82 libdyld.dylib 0x00007fff960825c9 start + 1

    Thread 0 crashed with X86 Thread State (64-bit): rax: 0x0000000000000000 rbx: 0x0000000000000006 rcx: 0x00007fff54a6dc38 rdx: 0x0000000000000000 rdi: 0x0000000000000513 rsi: 0x0000000000000006 rbp: 0x00007fff54a6dc60 rsp: 0x00007fff54a6dc38 r8: 0x00007fff54a6dc50 r9: 0x00007fff7b20a300 r10: 0x0000000008000000 r11: 0x0000000000000206 r12: 0x00000000000003f5 r13: 0x0000000000000000 r14: 0x00007fff7b20a300 r15: 0x000000010eef27f0 rip: 0x00007fff9262c286 rfl: 0x0000000000000206 cr2: 0x00007fff7b00ffd8

    Logical CPU: 0 Error Code: 0x02000148 Trap Number: 133

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0x7fff95b54ff7 libsystem_blocks.dylib (65) <9615D10A-FCA7-3BE4-AA1A-1B195DACE1A1> /usr/lib/system/libsystem_blocks.dylib 0x7fff95b55000 - 0x7fff95b71fff com.apple.GenerationalStorage (2.0 - 209.11) <9FF8DD11-25FB-3047-A5BF-9415339B3EEC> /System/Library/PrivateFrameworks/GenerationalStorage.framework/Versions/A/GenerationalStorage 0x7fff9607f000 - 0x7fff96082ff7 libdyld.dylib (353.2.1) <4E33E416-F1D8-3598-B8CC-6863E2ECD0E6> /usr/lib/system/libdyld.dylib 0x7fff960a1000 - 0x7fff960b2ff7 libz.1.dylib (55) <88C7C7DE-04B8-316F-8B74-ACD9F3DE1AA1> /usr/lib/libz.1.dylib 0x7fff960b3000 - 0x7fff96107fff libc++.1.dylib (120) <1B9530FD-989B-3174-BB1C-BDC159501710> /usr/lib/libc++.1.dylib 0x7fff9612c000 - 0x7fff961c0fff com.apple.ink.framework (10.9 - 213) <8E029630-1530-3734-A446-13353F0E7AC5> /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/Ink.framework/Versions/A/Ink 0x7fff961c1000 - 0x7fff96237fe7 libcorecrypto.dylib (233.1.2) /usr/lib/system/libcorecrypto.dylib 0x7fff9624c000 - 0x7fff963fcff7 com.apple.QuartzCore (1.10 - 361.15) <72A78C43-30DF-3748-9015-4B28119DB27B> /System/Library/Frameworks/QuartzCore.framework/Versions/A/QuartzCore 0x7fff9663f000 - 0x7fff96e96ffb com.apple.CoreGraphics (1.600.0 - 775.16) <864C1845-C41E-314C-A3B4-438DC39E5FBC> /System/Library/Frameworks/CoreGraphics.framework/Versions/A/CoreGraphics 0x7fff96ea2000 - 0x7fff96eb5ff7 com.apple.CoreBluetooth (1.0 - 1) /System/Library/Frameworks/CoreBluetooth.framework/Versions/A/CoreBluetooth 0x7fff96f41000 - 0x7fff96f4cff7 libkxld.dylib (2782.10.72) <68E07A32-28F5-3FBB-9D74-00B4F53C2FD4> /usr/lib/system/libkxld.dylib 0x7fff96fa1000 - 0x7fff96fe1ff7 libGLImage.dylib (11.1.1) <3986BFA3-4F55-380F-B01D-91BA9785D70C> /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLImage.dylib 0x7fff96fe2000 - 0x7fff96fefff7 libbz2.1.0.dylib (36) <2DF83FBC-5C08-39E1-94F5-C28653791B5F> /usr/lib/libbz2.1.0.dylib 0x7fff9735c000 - 0x7fff97379ffb libresolv.9.dylib (57) <26B38E61-298A-3C3A-82C1-3B5E98AD5E29> /usr/lib/libresolv.9.dylib 0x7fff9737a000 - 0x7fff9737bff7 com.apple.print.framework.Print (10.0 - 265) <3BC4FE7F-78A0-3E57-8F4C-520E7EFD36FA> /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/Print.framework/Versions/A/Print 0x7fff9737c000 - 0x7fff97385ff3 com.apple.CommonAuth (4.0 - 2.0) /System/Library/PrivateFrameworks/CommonAuth.framework/Versions/A/CommonAuth 0x7fff97386000 - 0x7fff97397ff7 libsystem_coretls.dylib (35.1.2) /usr/lib/system/libsystem_coretls.dylib 0x7fff9760f000 - 0x7fff9773ffff com.apple.UIFoundation (1.0 - 1) <8E030D93-441C-3997-9CD2-55C8DFAC8B84> /System/Library/PrivateFrameworks/UIFoundation.framework/Versions/A/UIFoundation 0x7fff97740000 - 0x7fff97749fff libGFXShared.dylib (11.1.1) <7AE7D152-597E-3B27-A52C-8DA76760B61C> /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGFXShared.dylib 0x7fff9809f000 - 0x7fff984acff7 libLAPACK.dylib (1128) /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libLAPACK.dylib 0x7fff99465000 - 0x7fff9946dffb com.apple.CoreServices.FSEvents (1210 - 1210) <782A9C69-7A45-31A7-8960-D08A36CBD0A7> /System/Library/Frameworks/CoreServices.framework/Versions/A/Frameworks/FSEvents.framework/Versions/A/FSEvents 0x7fff9946e000 - 0x7fff99561ff7 libJP2.dylib (1232) <10B78725-0B8A-3D87-B2E3-8FEED0C07F21> /System/Library/Frameworks/ImageIO.framework/Versions/A/Resources/libJP2.dylib 0x7fff99562000 - 0x7fff9959dfff com.apple.Symbolication (1.4 - 56045) /System/Library/PrivateFrameworks/Symbolication.framework/Versions/A/Symbolication 0x7fff9968f000 - 0x7fff998f7ff3 com.apple.security (7.0 - 57031.10.10) <79C37E73-271B-3BEF-A96E-CDB83FF12CF0> /System/Library/Frameworks/Security.framework/Versions/A/Security 0x7fff998f8000 - 0x7fff99920fff libsystem_info.dylib (459) /usr/lib/system/libsystem_info.dylib 0x7fff9993f000 - 0x7fff999aefff com.apple.SearchKit (1.4.0 - 1.4.0) /System/Library/Frameworks/CoreServices.framework/Versions/A/Frameworks/SearchKit.framework/Versions/A/SearchKit 0x7fff999fa000 - 0x7fff99a23ffb libxslt.1.dylib (13) /usr/lib/libxslt.1.dylib 0x7fff99a3f000 - 0x7fff99a41ff7 libsystem_sandbox.dylib (358.1.1) <95312E09-DA28-324A-A084-F3E574D0210E> /usr/lib/system/libsystem_sandbox.dylib 0x7fff99aac000 - 0x7fff99ba0fff libFontParser.dylib (134.1) /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ATS.framework/Versions/A/Resources/libFontParser.dylib 0x7fff99ba1000 - 0x7fff99ba2fff liblangid.dylib (117) /usr/lib/liblangid.dylib 0x7fff99bd1000 - 0x7fff99bd8ff7 libcompiler_rt.dylib (35) /usr/lib/system/libcompiler_rt.dylib 0x7fff99ca8000 - 0x7fff99caaff7 com.apple.securityhi (9.0 - 55006) <1F40ECF1-6AEF-3E64-9DAD-ADC646CCEA98> /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/SecurityHI.framework/Versions/A/SecurityHI 0x7fff9a24f000 - 0x7fff9a377ff7 com.apple.coreui (2.1 - 305.6.1) /System/Library/PrivateFrameworks/CoreUI.framework/Versions/A/CoreUI 0x7fff9a3fa000 - 0x7fff9a4bafff com.apple.backup.framework (1.6.2 - 1.6.2) <63E8CA47-B7B8-3A63-B505-D1622CE52527> /System/Library/PrivateFrameworks/Backup.framework/Versions/A/Backup 0x7fff9a4bd000 - 0x7fff9a4e0fff com.apple.Sharing (328.3.2 - 328.3.2) /System/Library/PrivateFrameworks/Sharing.framework/Versions/A/Sharing 0x7fff9a525000 - 0x7fff9a728ff3 com.apple.CFNetwork (720.2.4 - 720.2.4) /System/Library/Frameworks/CFNetwork.framework/Versions/A/CFNetwork 0x7fff9a7c1000 - 0x7fff9a802fff libGLU.dylib (11.1.1) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib 0x7fff9a985000 - 0x7fff9a989ff7 libGIF.dylib (1232) <061D5354-FE4F-3C7E-B563-99DC0198062D> /System/Library/Frameworks/ImageIO.framework/Versions/A/Resources/libGIF.dylib 0x7fff9a98a000 - 0x7fff9a98dfff com.apple.xpc.ServiceManagement (1.0 - 1) <5EFD45BF-B0CD-39F2-8232-6BA33E63E5D4> /System/Library/Frameworks/ServiceManagement.framework/Versions/A/ServiceManagement 0x7fff9a98e000 - 0x7fff9aa2cfff com.apple.Metadata (10.7.0 - 917.1) <46BE997C-B1F4-3BED-9332-FAC87297C87A> /System/Library/Frameworks/CoreServices.framework/Versions/A/Frameworks/Metadata.framework/Versions/A/Metadata

    External Modification Summary: Calls made by other processes targeting this process: task_for_pid: 0 thread_create: 0 thread_set_state: 0 Calls made by this process: task_for_pid: 0 thread_create: 0 thread_set_state: 0 Calls made by all processes on this machine: task_for_pid: 108396 thread_create: 0 thread_set_state: 0

    VM Region Summary: ReadOnly portion of Libraries: Total=222.5M resident=115.4M(52%) swapped_out_or_unallocated=107.1M(48%) Writable regions: Total=40.8M written=11.9M(29%) resident=18.5M(45%) swapped_out=0K(0%) unallocated=22.3M(55%)

    REGION TYPE VIRTUAL =========== ======= Kernel Alloc Once 4K MALLOC 30.4M MALLOC (admin) 32K STACK GUARD 56.0M Stack 8192K VM_ALLOCATE 16K __DATA 17.9M __IMAGE 528K __LINKEDIT 81.8M __TEXT 140.7M __UNICODE 544K shared memory 4K =========== ======= TOTAL 335.9M

    Model: iMac8,1, BootROM IM81.00C1.B00, 2 processors, Intel Core 2 Duo, 2.4 GHz, 2 GB, SMC 1.29f1 Graphics: ATI Radeon HD 2400 XT, ATI Radeon HD 2400, PCIe, 128 MB Memory Module: BANK 0/DIMM0, 1 GB, DDR2 SDRAM, 800 MHz, 0xAD00000000000000, 0x48594D503131325336344352362D53362020 Memory Module: BANK 1/DIMM1, 1 GB, DDR2 SDRAM, 800 MHz, 0x7F7F7F7F7F510000, 0x36345431323830323145444C322E35423220 AirPort: spairport_wireless_card_type_airport_extreme (0x14E4, 0x8C), Broadcom BCM43xx 1.0 (5.10.131.36.16) Bluetooth: Version 4.3.2f6 15235, 3 services, 27 devices, 1 incoming serial ports Network Service: AirPort, AirPort, en1 Serial ATA Device: Hitachi HDP725025GLA380, 250.06 GB Parallel ATA Device: MATSHITADVD-R UJ-875 USB Device: Built-in iSight USB Device: Keyboard Hub USB Device: USB Receiver USB Device: Apple Keyboard USB Device: BRCM2046 Hub USB Device: Bluetooth USB Host Controller USB Device: IR Receiver Thunderbolt Bus:

    opened by kkittel 16
  • Error running examples

    Error running examples

    Hello Everibody, after the installation of Nupic_sudio on Ubuntu 12.04, I tried to run the given examples. For each one I can initialize the nework with no problem, but if I try to do 1 step prediction (but for n-steps is the same) nothing changes in the net.

    Looking at the console, when I click the prediction button I see this message:

    Traceback (most recent call last): File "/usr/local/lib/python2.7/dist-packages/nupic_studio-1.1.2-py2.7.egg/nupic_studio/ui/main_form.py", line 509, in __buttonStepHTM_Click Global.project.network.nextStep() File "/usr/local/lib/python2.7/dist-packages/nupic_studio-1.1.2-py2.7.egg/nupic_studio/htm/network.py", line 68, in nextStep node.nextStep() File "/usr/local/lib/python2.7/dist-packages/nupic_studio-1.1.2-py2.7.egg/nupic_studio/htm/node_region.py", line 277, in nextStep self.updateTemporalElements() File "/usr/local/lib/python2.7/dist-packages/nupic_studio-1.1.2-py2.7.egg/nupic_studio/htm/node_region.py", line 472, in updateTemporalElements (_, sourceCellAbsIdx, permanence) = self.temporalPooler.connections.dataForSynapse(synIdx) TypeError: 'SynapseData' object is not iterable

    Any idea?

    bug in progress 
    opened by Millux 12
  • Startup error on OS X: cannot import name QtGui

    Startup error on OS X: cannot import name QtGui

    › pip install nustudio
    Downloading/unpacking nustudio
      Using download cache from /Users/mtaylor/Library/Caches/pip-downloads/https%3A%2F%2Fpypi.python.org%2Fpackages%2Fsource%2Fn%2Fnustudio%2Fnustudio-1.0.0.tar.gz
      Running setup.py (path:/private/var/folders/c1/fc9tt93s2p5b9d3wp185qxwc0000gn/T/pip_build_mtaylor/nustudio/setup.py) egg_info for package nustudio
    
    Requirement already satisfied (use --upgrade to upgrade): PyOpenGL in /usr/local/lib/python2.7/site-packages (from nustudio)
    Requirement already satisfied (use --upgrade to upgrade): PyOpenGL-accelerate in /usr/local/lib/python2.7/site-packages (from nustudio)
    Downloading/unpacking PyQtGraph (from nustudio)
      Using download cache from /Users/mtaylor/Library/Caches/pip-downloads/https%3A%2F%2Fpypi.python.org%2Fpackages%2Fsource%2Fp%2Fpyqtgraph%2Fpyqtgraph-0.9.8.tar.gz
      Running setup.py (path:/private/var/folders/c1/fc9tt93s2p5b9d3wp185qxwc0000gn/T/pip_build_mtaylor/PyQtGraph/setup.py) egg_info for package PyQtGraph
    
    Requirement already satisfied (use --upgrade to upgrade): numpy in /usr/local/lib/python2.7/site-packages (from PyQtGraph->nustudio)
    Requirement already satisfied (use --upgrade to upgrade): scipy in /usr/local/lib/python2.7/site-packages (from PyQtGraph->nustudio)
    Installing collected packages: nustudio, PyQtGraph
      Running setup.py install for nustudio
    
        Installing nustudio script to /usr/local/bin
      Running setup.py install for PyQtGraph
    
    Successfully installed nustudio PyQtGraph
    Cleaning up...
    
    › nustudio
    Traceback (most recent call last):
      File "/usr/local/bin/nustudio", line 9, in <module>
        load_entry_point('nustudio==1.0.0', 'gui_scripts', 'nustudio')()
      File "build/bdist.macosx-10.9-x86_64/egg/pkg_resources.py", line 356, in load_entry_point
        return get_distribution(dist).load_entry_point(group, name)
      File "build/bdist.macosx-10.9-x86_64/egg/pkg_resources.py", line 2476, in load_entry_point
        try:
      File "build/bdist.macosx-10.9-x86_64/egg/pkg_resources.py", line 2190, in load
        except AttributeError:
      File "/usr/local/lib/python2.7/site-packages/nustudio/program.py", line 4, in <module>
        from PyQt4 import QtGui, QtCore
    ImportError: cannot import name QtGui
    

    Do I still need to manually install PyQt4?

    opened by rhyolight 9
  • Installation error on Mac OS X

    Installation error on Mac OS X

    After pip install nustudio successfully completes, if I run the command nustudio, I see the following error message:

    Traceback (most recent call last):
      File "/usr/local/bin/nustudio", line 5, in <module>
        from pkg_resources import load_entry_point
      File "/System/Library/Frameworks/Python.framework/Versions/2.7/Extras/lib/python/pkg_resources.py", line 2603, in <module>
        working_set.require(__requires__)
      File "/System/Library/Frameworks/Python.framework/Versions/2.7/Extras/lib/python/pkg_resources.py", line 666, in require
        needed = self.resolve(parse_requirements(requirements))
      File "/System/Library/Frameworks/Python.framework/Versions/2.7/Extras/lib/python/pkg_resources.py", line 565, in resolve
        raise DistributionNotFound(req)  # XXX put more info here
    pkg_resources.DistributionNotFound: scipy
    

    It could be an issue with my environment though...

    P2 
    opened by chetan51 6
  • the error about installing nupic_studio

    the error about installing nupic_studio

    hi everyone I’m trying to install nupic_studio following as https://github.com/nupic-community/nupic.studio , when i run the command “pip install nupic_studio” ,i get the error :

    Running setup.py egg_info for package nupic-studio

    Traceback (most recent call last):
    
      File "<string>", line 16, in <module>
    
      File "/tmp/pip-build-root/nupic-studio/setup.py", line 37, in <module>
    
        execfile(os.path.join(REPO_DIR, "nupic_studio", "__init__.py"), {}, properties)
    
      File "/tmp/pip-build-root/nupic-studio/nupic_studio/__init__.py", line 30, in <module>
    
        versionFound = nupic.__version__
    
    AttributeError: 'module' object has no attribute '__version__'
    
    Complete output from command python setup.py egg_info:
    
    Traceback (most recent call last):
    

    File "", line 16, in

    File "/tmp/pip-build-root/nupic-studio/setup.py", line 37, in

    execfile(os.path.join(REPO_DIR, "nupic_studio", "__init__.py"), {}, properties)
    

    File "/tmp/pip-build-root/nupic-studio/nupic_studio/init.py", line 30, in

    versionFound = nupic.__version__
    

    AttributeError: 'module' object has no attribute ‘version'

    I install it on CentOS6.5, and install nupic using pip install https://s3-us-west-2.amazonaws.com/artifacts.numenta.org/numenta/nupic.core/releases/nupic.bindings/nupic.bindings-0.1.5-cp27-none-linux_x86_64.whl pip install nupic

    I look at the nupic.version on python shell ,the result is :

    [root@dev-whz ~]# python Python 2.7.6 (default, Sep 8 2015, 10:11:11) [GCC 4.8.2] on linux2 Type "help", "copyright", "credits" or "license" for more information.

    import nupic nupic.version Traceback (most recent call last): File "", line 1, in AttributeError: 'module' object has no attribute 'version'

    Can somebody offer any suggestions to fix the error ? and it looks like depending on an older version of NuPIC

    opened by wanghouzhi 5
  • Installing python-scipy for nustudio failure

    Installing python-scipy for nustudio failure

    Help needed...

    Situation: Nupic is run in Virtualbox, using preset VM image (https://github.com/numenta/nupic/wiki/Running-Nupic-in-a-Virtual-Machine#preset-vm-image). The base machine is 64-bit Windows 7 computer (Intel chipset). Problem: nustudio does not install (pip install nustudio), obviously failing to install scipy: --- < snip > --- Source in /tmp/pip_build_nupic/scipy has version 0.14.0, which satisfies requirement scipy (from PyQtGraph->nustudio) Installing collected packages: scipy Running setup.py install for scipy Running command /usr/bin/python -c "import setuptools, tokenize;file='/tmp/pip_build_nupic/scipy/setup.py';exec(compile(getattr(tokenize, 'open', open)(file).read().replace('\r\n', '\n'), file, 'exec'))" install --record /tmp/pip-JHhTqO-record/install-record.txt --single-version-externally-managed --compile blas_opt_info: blas_mkl_info: libraries mkl,vml,guide not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu'] NOT AVAILABLE
    atlas_blas_threads_info: Setting PTATLAS=ATLAS libraries ptf77blas,ptcblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu'] NOT AVAILABLE

    --- < snip > ---

    Installation of python-scipy separately is failing too:

    $ sudo apt-get install python-scipy Reading package lists... Done Building dependency tree
    Reading state information... Done The following NEW packages will be installed: python-scipy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 2 not fully installed or removed. Need to get 8,184 kB of archives. After this operation, 27.0 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! python-scipy Install these packages without verification [y/N]? y Err http://archive.ubuntu.com/ubuntu/ raring/universe python-scipy amd64 0.11.0+dfsg1-1ubuntu2 404 Not Found [IP: 91.189.88.153 80] Failed to fetch http://archive.ubuntu.com/ubuntu/pool/universe/p/python-scipy/python-scipy_0.11.0+dfsg1-1ubuntu2_amd64.deb 404 Not Found [IP: 91.189.88.153 80] E: Unable to fetch some archives, maybe run apt-get update or try with --fix-missing?

    opened by kalletammemae 5
  • Create wiki tutorial

    Create wiki tutorial

    After Matt (@rhyolight) and Daniel suggested a tutorial, I felt that that NuStudio is not so intuitive like I thought. Yeah, playing an existing example is very easy, but creating a HTM from scratch involves knowing how the inputs are organized in the input files. Furthermore, create an encoder is other subject that doesn't involve only intuition, but know how NuStudio integrate sensors to HTMs.

    So I have a draft summary for this:

    Introduction
    1. Overview
    2. Open a existing project (this could be moved to "Overview")
    3. Your first project
    4. Working with encoders
    ...
    

    What do you think? What would you like see in this tutorial?

    P3 
    opened by david-ragazzi 4
  • add me to owners of nupic-community

    add me to owners of nupic-community

    @rhyolight @david-ragazzi I'd like to try a fork of nupic in nupic-community/nupic.bio which should be an experimental repo for:

    • simplified, cleaned-up
    • more Whitepaper/biologically accurate
    • python only, not focusing on speed in first place
    • simple reference implementation for learning HTM/CLA

    but I can't create/fork nupic in nupic-community as I'm not an owner. Please add me there

    invalid 
    opened by breznak 3
  • Can't save a project in nupic studio

    Can't save a project in nupic studio

    After I add a sensor to the top region, I do File > Save Project, but the window that opens seems to be a window to open a project. There is nowhere to type in the project name and there is no "save" button. screen shot 2014-10-07 at 12 31 17 am

    opened by mikaschiller 3
  • installation error

    installation error

    See trace below.

    $ pip install --user nustudio
    Downloading/unpacking nustudio
      Downloading nustudio-1.0.0.tar.gz (980kB): 980kB downloaded
      Running setup.py (path:/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/nustudio/setup.py) egg_info for package nustudio
    
    Downloading/unpacking PyOpenGL (from nustudio)
      Downloading PyOpenGL-3.1.0.tar.gz (1.2MB): 1.2MB downloaded
      Running setup.py (path:/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyOpenGL/setup.py) egg_info for package PyOpenGL
    
        warning: no previously-included files matching '*.odt' found anywhere in distribution
        warning: no previously-included files matching '*.odp' found anywhere in distribution
        warning: no previously-included files matching '.cvsignore' found anywhere in distribution
        warning: no previously-included files matching '*.diff' found anywhere in distribution
        warning: no previously-included files found matching 'src/*.h'
        warning: no previously-included files found matching 'src/*.xml'
        warning: no previously-included files found matching 'src/*.zip'
        warning: no previously-included files found matching 'src/*.pdf'
        warning: no previously-included files found matching 'src/*.zip'
        warning: no previously-included files found matching 'src/*.txt'
        warning: no files found matching 'src/win32deps.py'
        warning: no files found matching 'src/toglinstall/get_togl.py'
        warning: no files found matching 'metadata.py'
        warning: no files found matching 'ChangeLog.txt'
        warning: no previously-included files found matching 'OpenGL_accelerate'
    Downloading/unpacking PyOpenGL-accelerate (from nustudio)
      Downloading PyOpenGL-accelerate-3.1.0.tar.gz (323kB): 323kB downloaded
      Running setup.py (path:/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyOpenGL-accelerate/setup.py) egg_info for package PyOpenGL-accelerate
    
    Downloading/unpacking PyQtGraph (from nustudio)
      Downloading pyqtgraph-0.9.8.tar.gz (958kB): 958kB downloaded
      Running setup.py (path:/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyQtGraph/setup.py) egg_info for package PyQtGraph
    
    Requirement already satisfied (use --upgrade to upgrade): numpy in ./Library/Python/2.7/lib/python/site-packages (from PyQtGraph->nustudio)
    Requirement already satisfied (use --upgrade to upgrade): scipy in /System/Library/Frameworks/Python.framework/Versions/2.7/Extras/lib/python (from PyQtGraph->nustudio)
    Installing collected packages: nustudio, PyOpenGL, PyOpenGL-accelerate, PyQtGraph
      Running setup.py install for nustudio
    
        Installing nustudio script to /Users/spurdy/Library/Python/2.7/bin
      Running setup.py install for PyOpenGL
    
        warning: no previously-included files matching '*.odt' found anywhere in distribution
        warning: no previously-included files matching '*.odp' found anywhere in distribution
        warning: no previously-included files matching '.cvsignore' found anywhere in distribution
        warning: no previously-included files matching '*.diff' found anywhere in distribution
        warning: no previously-included files found matching 'src/*.h'
        warning: no previously-included files found matching 'src/*.xml'
        warning: no previously-included files found matching 'src/*.zip'
        warning: no previously-included files found matching 'src/*.pdf'
        warning: no previously-included files found matching 'src/*.zip'
        warning: no previously-included files found matching 'src/*.txt'
        warning: no files found matching 'src/win32deps.py'
        warning: no files found matching 'src/toglinstall/get_togl.py'
        warning: no files found matching 'metadata.py'
        warning: no files found matching 'ChangeLog.txt'
        warning: no previously-included files found matching 'OpenGL_accelerate'
      Running setup.py install for PyOpenGL-accelerate
        skipping 'src/wrapper.c' Cython extension (up-to-date)
        building 'OpenGL_accelerate.wrapper' extension
        cc -DNDEBUG -g -fwrapv -Os -Wall -Wstrict-prototypes -Qunused-arguments -Qunused-arguments -pipe -arch x86_64 -I/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyOpenGL-accelerate/.. -I/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyOpenGL-accelerate/src -I/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyOpenGL-accelerate -I/System/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c src/wrapper.c -o build/temp.macosx-10.9-intel-2.7/src/wrapper.o
        src/wrapper.c:12710:28: warning: unused function '__Pyx_PyObject_AsString' [-Wunused-function]
        static CYTHON_INLINE char* __Pyx_PyObject_AsString(PyObject* o) {
                                   ^
        src/wrapper.c:12707:32: warning: unused function '__Pyx_PyUnicode_FromString' [-Wunused-function]
        static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(char* c_str) {
                                       ^
        src/wrapper.c:404:29: warning: unused function '__Pyx_Py_UNICODE_strlen' [-Wunused-function]
        static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u)
                                    ^
        src/wrapper.c:12829:33: warning: unused function '__Pyx_PyIndex_AsSsize_t' [-Wunused-function]
        static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
                                        ^
        src/wrapper.c:12858:33: warning: unused function '__Pyx_PyInt_FromSize_t' [-Wunused-function]
        static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
                                        ^
        src/wrapper.c:11576:27: warning: unused function '__Pyx_ErrFetch' [-Wunused-function]
        static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb) {
                                  ^
        src/wrapper.c:11625:32: warning: unused function '__Pyx_GetItemInt_Fast' [-Wunused-function]
        static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Fast(PyObject *o, Py_ssize_t i,
                                       ^
        7 warnings generated.
        cc -bundle -undefined dynamic_lookup -Wl,-F. -Qunused-arguments -Qunused-arguments -arch x86_64 build/temp.macosx-10.9-intel-2.7/src/wrapper.o -o build/lib.macosx-10.9-intel-2.7/OpenGL_accelerate/wrapper.so
        skipping 'src/formathandler.c' Cython extension (up-to-date)
        building 'OpenGL_accelerate.formathandler' extension
        cc -DNDEBUG -g -fwrapv -Os -Wall -Wstrict-prototypes -Qunused-arguments -Qunused-arguments -pipe -arch x86_64 -I/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyOpenGL-accelerate/.. -I/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyOpenGL-accelerate/src -I/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyOpenGL-accelerate -I/System/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c src/formathandler.c -o build/temp.macosx-10.9-intel-2.7/src/formathandler.o
        src/formathandler.c:4011:28: warning: unused function '__Pyx_PyObject_AsString' [-Wunused-function]
        static CYTHON_INLINE char* __Pyx_PyObject_AsString(PyObject* o) {
                                   ^
        src/formathandler.c:4008:32: warning: unused function '__Pyx_PyUnicode_FromString' [-Wunused-function]
        static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(char* c_str) {
                                       ^
        src/formathandler.c:404:29: warning: unused function '__Pyx_Py_UNICODE_strlen' [-Wunused-function]
        static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u)
                                    ^
        src/formathandler.c:4075:26: warning: unused function '__Pyx_PyObject_IsTrue' [-Wunused-function]
        static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) {
                                 ^
        src/formathandler.c:4130:33: warning: unused function '__Pyx_PyIndex_AsSsize_t' [-Wunused-function]
        static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
                                        ^
        src/formathandler.c:4159:33: warning: unused function '__Pyx_PyInt_FromSize_t' [-Wunused-function]
        static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
                                        ^
        src/formathandler.c:3251:27: warning: unused function '__Pyx_ErrFetch' [-Wunused-function]
        static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb) {
                                  ^
        src/formathandler.c:3671:32: warning: unused function '__Pyx_PyInt_From_long' [-Wunused-function]
        static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) {
                                       ^
        src/formathandler.c:3702:27: warning: function '__Pyx_PyInt_As_long' is not needed and will not be emitted [-Wunneeded-internal-declaration]
        static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) {
                                  ^
        9 warnings generated.
        cc -bundle -undefined dynamic_lookup -Wl,-F. -Qunused-arguments -Qunused-arguments -arch x86_64 build/temp.macosx-10.9-intel-2.7/src/formathandler.o -o build/lib.macosx-10.9-intel-2.7/OpenGL_accelerate/formathandler.so
        skipping 'src/arraydatatype.c' Cython extension (up-to-date)
        building 'OpenGL_accelerate.arraydatatype' extension
        cc -DNDEBUG -g -fwrapv -Os -Wall -Wstrict-prototypes -Qunused-arguments -Qunused-arguments -pipe -arch x86_64 -I/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyOpenGL-accelerate/.. -I/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyOpenGL-accelerate/src -I/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyOpenGL-accelerate -I/System/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c src/arraydatatype.c -o build/temp.macosx-10.9-intel-2.7/src/arraydatatype.o
        src/arraydatatype.c:12599:28: warning: unused function '__Pyx_PyObject_AsString' [-Wunused-function]
        static CYTHON_INLINE char* __Pyx_PyObject_AsString(PyObject* o) {
                                   ^
        src/arraydatatype.c:12596:32: warning: unused function '__Pyx_PyUnicode_FromString' [-Wunused-function]
        static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(char* c_str) {
                                       ^
        src/arraydatatype.c:404:29: warning: unused function '__Pyx_Py_UNICODE_strlen' [-Wunused-function]
        static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u)
                                    ^
        src/arraydatatype.c:12718:33: warning: unused function '__Pyx_PyIndex_AsSsize_t' [-Wunused-function]
        static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
                                        ^
        src/arraydatatype.c:12747:33: warning: unused function '__Pyx_PyInt_FromSize_t' [-Wunused-function]
        static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
                                        ^
        src/arraydatatype.c:11546:27: warning: unused function '__Pyx_ErrFetch' [-Wunused-function]
        static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb) {
                                  ^
        src/arraydatatype.c:11787:32: warning: unused function '__Pyx_GetItemInt_List_Fast' [-Wunused-function]
        static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_t i,
                                       ^
        src/arraydatatype.c:12205:27: warning: function '__Pyx_PyInt_As_long' is not needed and will not be emitted [-Wunneeded-internal-declaration]
        static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) {
                                  ^
        8 warnings generated.
        cc -bundle -undefined dynamic_lookup -Wl,-F. -Qunused-arguments -Qunused-arguments -arch x86_64 build/temp.macosx-10.9-intel-2.7/src/arraydatatype.o -o build/lib.macosx-10.9-intel-2.7/OpenGL_accelerate/arraydatatype.so
        skipping 'src/errorchecker.c' Cython extension (up-to-date)
        building 'OpenGL_accelerate.errorchecker' extension
        cc -DNDEBUG -g -fwrapv -Os -Wall -Wstrict-prototypes -Qunused-arguments -Qunused-arguments -pipe -arch x86_64 -I/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyOpenGL-accelerate/.. -I/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyOpenGL-accelerate/src -I/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyOpenGL-accelerate -I/System/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c src/errorchecker.c -o build/temp.macosx-10.9-intel-2.7/src/errorchecker.o
        src/errorchecker.c:3379:28: warning: unused function '__Pyx_PyObject_AsString' [-Wunused-function]
        static CYTHON_INLINE char* __Pyx_PyObject_AsString(PyObject* o) {
                                   ^
        src/errorchecker.c:3376:32: warning: unused function '__Pyx_PyUnicode_FromString' [-Wunused-function]
        static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(char* c_str) {
                                       ^
        src/errorchecker.c:404:29: warning: unused function '__Pyx_Py_UNICODE_strlen' [-Wunused-function]
        static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u)
                                    ^
        src/errorchecker.c:3498:33: warning: unused function '__Pyx_PyIndex_AsSsize_t' [-Wunused-function]
        static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
                                        ^
        src/errorchecker.c:3527:33: warning: unused function '__Pyx_PyInt_FromSize_t' [-Wunused-function]
        static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
                                        ^
        src/errorchecker.c:2636:27: warning: unused function '__Pyx_ErrFetch' [-Wunused-function]
        static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb) {
                                  ^
        src/errorchecker.c:3039:32: warning: unused function '__Pyx_PyInt_From_long' [-Wunused-function]
        static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) {
                                       ^
        src/errorchecker.c:3070:27: warning: function '__Pyx_PyInt_As_long' is not needed and will not be emitted [-Wunneeded-internal-declaration]
        static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) {
                                  ^
        8 warnings generated.
        cc -bundle -undefined dynamic_lookup -Wl,-F. -Qunused-arguments -Qunused-arguments -arch x86_64 build/temp.macosx-10.9-intel-2.7/src/errorchecker.o -o build/lib.macosx-10.9-intel-2.7/OpenGL_accelerate/errorchecker.so
        skipping 'src/vbo.c' Cython extension (up-to-date)
        building 'OpenGL_accelerate.vbo' extension
        cc -DNDEBUG -g -fwrapv -Os -Wall -Wstrict-prototypes -Qunused-arguments -Qunused-arguments -pipe -arch x86_64 -I/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyOpenGL-accelerate/.. -I/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyOpenGL-accelerate/src -I/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyOpenGL-accelerate -I/System/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c src/vbo.c -o build/temp.macosx-10.9-intel-2.7/src/vbo.o
        src/vbo.c:10740:28: warning: unused function '__Pyx_PyObject_AsString' [-Wunused-function]
        static CYTHON_INLINE char* __Pyx_PyObject_AsString(PyObject* o) {
                                   ^
        src/vbo.c:10737:32: warning: unused function '__Pyx_PyUnicode_FromString' [-Wunused-function]
        static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(char* c_str) {
                                       ^
        src/vbo.c:404:29: warning: unused function '__Pyx_Py_UNICODE_strlen' [-Wunused-function]
        static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u)
                                    ^
        src/vbo.c:10859:33: warning: unused function '__Pyx_PyIndex_AsSsize_t' [-Wunused-function]
        static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
                                        ^
        src/vbo.c:10888:33: warning: unused function '__Pyx_PyInt_FromSize_t' [-Wunused-function]
        static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
                                        ^
        src/vbo.c:9448:32: warning: unused function '__Pyx_GetItemInt_List_Fast' [-Wunused-function]
        static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_t i,
                                       ^
        src/vbo.c:9462:32: warning: unused function '__Pyx_GetItemInt_Tuple_Fast' [-Wunused-function]
        static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Tuple_Fast(PyObject *o, Py_ssize_t i,
                                       ^
        src/vbo.c:9556:26: warning: unused function '__Pyx_PyUnicode_Equals' [-Wunused-function]
        static CYTHON_INLINE int __Pyx_PyUnicode_Equals(PyObject* s1, PyObject* s2, int equals) {
                                 ^
        src/vbo.c:10346:27: warning: function '__Pyx_PyInt_As_long' is not needed and will not be emitted [-Wunneeded-internal-declaration]
        static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) {
                                  ^
        9 warnings generated.
        cc -bundle -undefined dynamic_lookup -Wl,-F. -Qunused-arguments -Qunused-arguments -arch x86_64 build/temp.macosx-10.9-intel-2.7/src/vbo.o -o build/lib.macosx-10.9-intel-2.7/OpenGL_accelerate/vbo.so
        skipping 'src/nones_formathandler.c' Cython extension (up-to-date)
        building 'OpenGL_accelerate.nones_formathandler' extension
        cc -DNDEBUG -g -fwrapv -Os -Wall -Wstrict-prototypes -Qunused-arguments -Qunused-arguments -pipe -arch x86_64 -I/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyOpenGL-accelerate/.. -I/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyOpenGL-accelerate/src -I/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyOpenGL-accelerate -I/System/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c src/nones_formathandler.c -o build/temp.macosx-10.9-intel-2.7/src/nones_formathandler.o
        src/nones_formathandler.c:1891:28: warning: unused function '__Pyx_PyObject_AsString' [-Wunused-function]
        static CYTHON_INLINE char* __Pyx_PyObject_AsString(PyObject* o) {
                                   ^
        src/nones_formathandler.c:1888:32: warning: unused function '__Pyx_PyUnicode_FromString' [-Wunused-function]
        static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(char* c_str) {
                                       ^
        src/nones_formathandler.c:404:29: warning: unused function '__Pyx_Py_UNICODE_strlen' [-Wunused-function]
        static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u)
                                    ^
        src/nones_formathandler.c:1955:26: warning: unused function '__Pyx_PyObject_IsTrue' [-Wunused-function]
        static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) {
                                 ^
        src/nones_formathandler.c:2010:33: warning: unused function '__Pyx_PyIndex_AsSsize_t' [-Wunused-function]
        static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
                                        ^
        src/nones_formathandler.c:2039:33: warning: unused function '__Pyx_PyInt_FromSize_t' [-Wunused-function]
        static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
                                        ^
        src/nones_formathandler.c:1324:32: warning: unused function '__Pyx_PyInt_From_int' [-Wunused-function]
        static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value) {
                                       ^
        src/nones_formathandler.c:1371:26: warning: function '__Pyx_PyInt_As_int' is not needed and will not be emitted [-Wunneeded-internal-declaration]
        static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) {
                                 ^
        src/nones_formathandler.c:1466:32: warning: unused function '__Pyx_PyInt_From_long' [-Wunused-function]
        static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) {
                                       ^
        src/nones_formathandler.c:1497:27: warning: function '__Pyx_PyInt_As_long' is not needed and will not be emitted [-Wunneeded-internal-declaration]
        static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) {
                                  ^
        10 warnings generated.
        cc -bundle -undefined dynamic_lookup -Wl,-F. -Qunused-arguments -Qunused-arguments -arch x86_64 build/temp.macosx-10.9-intel-2.7/src/nones_formathandler.o -o build/lib.macosx-10.9-intel-2.7/OpenGL_accelerate/nones_formathandler.so
        skipping 'src/latebind.c' Cython extension (up-to-date)
        building 'OpenGL_accelerate.latebind' extension
        cc -DNDEBUG -g -fwrapv -Os -Wall -Wstrict-prototypes -Qunused-arguments -Qunused-arguments -pipe -arch x86_64 -I/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyOpenGL-accelerate/.. -I/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyOpenGL-accelerate/src -I/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyOpenGL-accelerate -I/System/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c src/latebind.c -o build/temp.macosx-10.9-intel-2.7/src/latebind.o
        src/latebind.c:2327:28: warning: unused function '__Pyx_PyObject_AsString' [-Wunused-function]
        static CYTHON_INLINE char* __Pyx_PyObject_AsString(PyObject* o) {
                                   ^
        src/latebind.c:2324:32: warning: unused function '__Pyx_PyUnicode_FromString' [-Wunused-function]
        static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(char* c_str) {
                                       ^
        src/latebind.c:404:29: warning: unused function '__Pyx_Py_UNICODE_strlen' [-Wunused-function]
        static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u)
                                    ^
        src/latebind.c:2446:33: warning: unused function '__Pyx_PyIndex_AsSsize_t' [-Wunused-function]
        static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
                                        ^
        src/latebind.c:2475:33: warning: unused function '__Pyx_PyInt_FromSize_t' [-Wunused-function]
        static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
                                        ^
        src/latebind.c:1871:32: warning: unused function '__Pyx_PyInt_From_long' [-Wunused-function]
        static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) {
                                       ^
        src/latebind.c:1918:27: warning: function '__Pyx_PyInt_As_long' is not needed and will not be emitted [-Wunneeded-internal-declaration]
        static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) {
                                  ^
        src/latebind.c:2018:26: warning: function '__Pyx_PyInt_As_int' is not needed and will not be emitted [-Wunneeded-internal-declaration]
        static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) {
                                 ^
        8 warnings generated.
        cc -bundle -undefined dynamic_lookup -Wl,-F. -Qunused-arguments -Qunused-arguments -arch x86_64 build/temp.macosx-10.9-intel-2.7/src/latebind.o -o build/lib.macosx-10.9-intel-2.7/OpenGL_accelerate/latebind.so
        skipping 'src/buffers_formathandler.c' Cython extension (up-to-date)
        building 'OpenGL_accelerate.buffers_formathandler' extension
        cc -DNDEBUG -g -fwrapv -Os -Wall -Wstrict-prototypes -Qunused-arguments -Qunused-arguments -pipe -arch x86_64 -I/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyOpenGL-accelerate/.. -I/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyOpenGL-accelerate/src -I/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyOpenGL-accelerate -I/System/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c src/buffers_formathandler.c -o build/temp.macosx-10.9-intel-2.7/src/buffers_formathandler.o
        src/buffers_formathandler.c:4026:28: warning: unused function '__Pyx_PyObject_AsString' [-Wunused-function]
        static CYTHON_INLINE char* __Pyx_PyObject_AsString(PyObject* o) {
                                   ^
        src/buffers_formathandler.c:4023:32: warning: unused function '__Pyx_PyUnicode_FromString' [-Wunused-function]
        static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(char* c_str) {
                                       ^
        src/buffers_formathandler.c:404:29: warning: unused function '__Pyx_Py_UNICODE_strlen' [-Wunused-function]
        static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u)
                                    ^
        src/buffers_formathandler.c:4090:26: warning: unused function '__Pyx_PyObject_IsTrue' [-Wunused-function]
        static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) {
                                 ^
        src/buffers_formathandler.c:3073:27: warning: unused function '__Pyx_ErrFetch' [-Wunused-function]
        static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb) {
                                  ^
        src/buffers_formathandler.c:3601:32: warning: unused function '__Pyx_PyInt_From_long' [-Wunused-function]
        static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) {
                                       ^
        src/buffers_formathandler.c:3632:27: warning: function '__Pyx_PyInt_As_long' is not needed and will not be emitted [-Wunneeded-internal-declaration]
        static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) {
                                  ^
        7 warnings generated.
        cc -bundle -undefined dynamic_lookup -Wl,-F. -Qunused-arguments -Qunused-arguments -arch x86_64 build/temp.macosx-10.9-intel-2.7/src/buffers_formathandler.o -o build/lib.macosx-10.9-intel-2.7/OpenGL_accelerate/buffers_formathandler.so
        skipping 'src/numpy_formathandler.c' Cython extension (up-to-date)
        building 'OpenGL_accelerate.numpy_formathandler' extension
        cc -DNDEBUG -g -fwrapv -Os -Wall -Wstrict-prototypes -Qunused-arguments -Qunused-arguments -pipe -arch x86_64 -I/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyOpenGL-accelerate/.. -I/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyOpenGL-accelerate/src -I/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyOpenGL-accelerate -I/Users/spurdy/Library/Python/2.7/lib/python/site-packages/numpy/core/include -I/System/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c src/numpy_formathandler.c -o build/temp.macosx-10.9-intel-2.7/src/numpy_formathandler.o
        In file included from src/numpy_formathandler.c:346:
        In file included from /Users/spurdy/Library/Python/2.7/lib/python/site-packages/numpy/core/include/numpy/arrayobject.h:15:
        In file included from /Users/spurdy/Library/Python/2.7/lib/python/site-packages/numpy/core/include/numpy/ndarrayobject.h:17:
        In file included from /Users/spurdy/Library/Python/2.7/lib/python/site-packages/numpy/core/include/numpy/ndarraytypes.h:1728:
        /Users/spurdy/Library/Python/2.7/lib/python/site-packages/numpy/core/include/numpy/npy_deprecated_api.h:11:2: warning: "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings]
        #warning "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION"
         ^
        In file included from src/numpy_formathandler.c:347:
        In file included from /Users/spurdy/Library/Python/2.7/lib/python/site-packages/numpy/core/include/numpy/ufuncobject.h:311:
        /Users/spurdy/Library/Python/2.7/lib/python/site-packages/numpy/core/include/numpy/__ufunc_api.h:236:1: warning: unused function '_import_umath' [-Wunused-function]
        _import_umath(void)
        ^
        src/numpy_formathandler.c:7543:28: warning: unused function '__Pyx_PyObject_AsString' [-Wunused-function]
        static CYTHON_INLINE char* __Pyx_PyObject_AsString(PyObject* o) {
                                   ^
        src/numpy_formathandler.c:7540:32: warning: unused function '__Pyx_PyUnicode_FromString' [-Wunused-function]
        static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(char* c_str) {
                                       ^
        src/numpy_formathandler.c:409:29: warning: unused function '__Pyx_Py_UNICODE_strlen' [-Wunused-function]
        static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u)
                                    ^
        src/numpy_formathandler.c:7662:33: warning: unused function '__Pyx_PyIndex_AsSsize_t' [-Wunused-function]
        static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
                                        ^
        src/numpy_formathandler.c:6242:27: warning: unused function '__Pyx_ErrFetch' [-Wunused-function]
        static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb) {
                                  ^
        src/numpy_formathandler.c:6889:48: warning: unused function '__pyx_t_float_complex_from_parts' [-Wunused-function]
            static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) {
                                                       ^
        src/numpy_formathandler.c:6899:30: warning: unused function '__Pyx_c_eqf' [-Wunused-function]
            static CYTHON_INLINE int __Pyx_c_eqf(__pyx_t_float_complex a, __pyx_t_float_complex b) {
                                     ^
        src/numpy_formathandler.c:6902:48: warning: unused function '__Pyx_c_sumf' [-Wunused-function]
            static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sumf(__pyx_t_float_complex a, __pyx_t_float_complex b) {
                                                       ^
        src/numpy_formathandler.c:6908:48: warning: unused function '__Pyx_c_difff' [-Wunused-function]
            static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_difff(__pyx_t_float_complex a, __pyx_t_float_complex b) {
                                                       ^
        src/numpy_formathandler.c:6920:48: warning: unused function '__Pyx_c_quotf' [-Wunused-function]
            static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quotf(__pyx_t_float_complex a, __pyx_t_float_complex b) {
                                                       ^
        src/numpy_formathandler.c:6927:48: warning: unused function '__Pyx_c_negf' [-Wunused-function]
            static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_negf(__pyx_t_float_complex a) {
                                                       ^
        src/numpy_formathandler.c:6933:30: warning: unused function '__Pyx_c_is_zerof' [-Wunused-function]
            static CYTHON_INLINE int __Pyx_c_is_zerof(__pyx_t_float_complex a) {
                                     ^
        src/numpy_formathandler.c:6936:48: warning: unused function '__Pyx_c_conjf' [-Wunused-function]
            static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conjf(__pyx_t_float_complex a) {
                                                       ^
        src/numpy_formathandler.c:6950:52: warning: unused function '__Pyx_c_powf' [-Wunused-function]
                static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_powf(__pyx_t_float_complex a, __pyx_t_float_complex b) {
                                                           ^
        src/numpy_formathandler.c:7009:49: warning: unused function '__pyx_t_double_complex_from_parts' [-Wunused-function]
            static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) {
                                                        ^
        src/numpy_formathandler.c:7019:30: warning: unused function '__Pyx_c_eq' [-Wunused-function]
            static CYTHON_INLINE int __Pyx_c_eq(__pyx_t_double_complex a, __pyx_t_double_complex b) {
                                     ^
        src/numpy_formathandler.c:7022:49: warning: unused function '__Pyx_c_sum' [-Wunused-function]
            static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum(__pyx_t_double_complex a, __pyx_t_double_complex b) {
                                                        ^
        src/numpy_formathandler.c:7028:49: warning: unused function '__Pyx_c_diff' [-Wunused-function]
            static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff(__pyx_t_double_complex a, __pyx_t_double_complex b) {
                                                        ^
        src/numpy_formathandler.c:7040:49: warning: unused function '__Pyx_c_quot' [-Wunused-function]
            static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot(__pyx_t_double_complex a, __pyx_t_double_complex b) {
                                                        ^
        src/numpy_formathandler.c:7047:49: warning: unused function '__Pyx_c_neg' [-Wunused-function]
            static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg(__pyx_t_double_complex a) {
                                                        ^
        src/numpy_formathandler.c:7053:30: warning: unused function '__Pyx_c_is_zero' [-Wunused-function]
            static CYTHON_INLINE int __Pyx_c_is_zero(__pyx_t_double_complex a) {
                                     ^
        src/numpy_formathandler.c:7056:49: warning: unused function '__Pyx_c_conj' [-Wunused-function]
            static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj(__pyx_t_double_complex a) {
                                                        ^
        src/numpy_formathandler.c:7070:53: warning: unused function '__Pyx_c_pow' [-Wunused-function]
                static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow(__pyx_t_double_complex a, __pyx_t_double_complex b) {
                                                            ^
        src/numpy_formathandler.c:7118:32: warning: unused function '__Pyx_PyInt_From_long' [-Wunused-function]
        static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) {
                                       ^
        src/numpy_formathandler.c:7149:27: warning: function '__Pyx_PyInt_As_long' is not needed and will not be emitted [-Wunneeded-internal-declaration]
        static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) {
                                  ^
        src/numpy_formathandler.c:4319:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew1' [-Wunused-function]
        static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew1(PyObject *__pyx_v_a) {
                                       ^
        src/numpy_formathandler.c:4369:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew2' [-Wunused-function]
        static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew2(PyObject *__pyx_v_a, PyObject *__pyx_v_b) {
                                       ^
        src/numpy_formathandler.c:4419:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew3' [-Wunused-function]
        static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew3(PyObject *__pyx_v_a, PyObject *__pyx_v_b, PyObject *__pyx_v_c) {
                                       ^
        src/numpy_formathandler.c:4469:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew4' [-Wunused-function]
        static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew4(PyObject *__pyx_v_a, PyObject *__pyx_v_b, PyObject *__pyx_v_c, PyObject *__pyx_v_d) {
                                       ^
        src/numpy_formathandler.c:4519:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew5' [-Wunused-function]
        static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew5(PyObject *__pyx_v_a, PyObject *__pyx_v_b, PyObject *__pyx_v_c, PyObject *__pyx_v_d, PyObject *__pyx_v_e) {
                                       ^
        src/numpy_formathandler.c:5273:27: warning: unused function '__pyx_f_5numpy_set_array_base' [-Wunused-function]
        static CYTHON_INLINE void __pyx_f_5numpy_set_array_base(PyArrayObject *__pyx_v_arr, PyObject *__pyx_v_base) {
                                  ^
        src/numpy_formathandler.c:5361:32: warning: unused function '__pyx_f_5numpy_get_array_base' [-Wunused-function]
        static CYTHON_INLINE PyObject *__pyx_f_5numpy_get_array_base(PyArrayObject *__pyx_v_arr) {
                                       ^
        34 warnings generated.
        cc -bundle -undefined dynamic_lookup -Wl,-F. -Qunused-arguments -Qunused-arguments -arch x86_64 build/temp.macosx-10.9-intel-2.7/src/numpy_formathandler.o -o build/lib.macosx-10.9-intel-2.7/OpenGL_accelerate/numpy_formathandler.so
    
      Running setup.py install for PyQtGraph
        Traceback (most recent call last):
          File "<string>", line 1, in <module>
          File "/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyQtGraph/setup.py", line 53, in <module>
            'scipy',
          File "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/core.py", line 152, in setup
            dist.run_commands()
          File "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/dist.py", line 953, in run_commands
            self.run_command(cmd)
          File "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/dist.py", line 972, in run_command
            cmd_obj.run()
          File "/Library/Python/2.7/site-packages/setuptools/command/install.py", line 54, in run
            return _install.run(self)
          File "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/command/install.py", line 573, in run
            self.run_command('build')
          File "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/cmd.py", line 326, in run_command
            self.distribution.run_command(command)
          File "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/dist.py", line 972, in run_command
            cmd_obj.run()
          File "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/command/build.py", line 127, in run
            self.run_command(cmd_name)
          File "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/cmd.py", line 326, in run_command
            self.distribution.run_command(command)
          File "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/dist.py", line 972, in run_command
            cmd_obj.run()
          File "/Library/Python/2.7/site-packages/setuptools/command/build_py.py", line 42, in run
            self.build_packages()
          File "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/command/build_py.py", line 372, in build_packages
            self.build_module(module, module_file, package)
          File "/Library/Python/2.7/site-packages/setuptools/command/build_py.py", line 60, in build_module
            outfile, copied = _build_py.build_module(self, module, module_file, package)
          File "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/command/build_py.py", line 333, in build_module
            "'package' must be a string (dot-separated), list, or tuple")
        TypeError: 'package' must be a string (dot-separated), list, or tuple
        Complete output from command /usr/bin/python -c "import setuptools, tokenize;__file__=u'/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyQtGraph/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" install --record /var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip-fXqV0Z-record/install-record.txt --single-version-externally-managed --compile --user:
        running install
    
    running build
    
    running build_py
    
    Traceback (most recent call last):
    
      File "<string>", line 1, in <module>
    
      File "/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyQtGraph/setup.py", line 53, in <module>
    
        'scipy',
    
      File "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/core.py", line 152, in setup
    
        dist.run_commands()
    
      File "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/dist.py", line 953, in run_commands
    
        self.run_command(cmd)
    
      File "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/dist.py", line 972, in run_command
    
        cmd_obj.run()
    
      File "/Library/Python/2.7/site-packages/setuptools/command/install.py", line 54, in run
    
        return _install.run(self)
    
      File "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/command/install.py", line 573, in run
    
        self.run_command('build')
    
      File "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/cmd.py", line 326, in run_command
    
        self.distribution.run_command(command)
    
      File "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/dist.py", line 972, in run_command
    
        cmd_obj.run()
    
      File "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/command/build.py", line 127, in run
    
        self.run_command(cmd_name)
    
      File "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/cmd.py", line 326, in run_command
    
        self.distribution.run_command(command)
    
      File "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/dist.py", line 972, in run_command
    
        cmd_obj.run()
    
      File "/Library/Python/2.7/site-packages/setuptools/command/build_py.py", line 42, in run
    
        self.build_packages()
    
      File "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/command/build_py.py", line 372, in build_packages
    
        self.build_module(module, module_file, package)
    
      File "/Library/Python/2.7/site-packages/setuptools/command/build_py.py", line 60, in build_module
    
        outfile, copied = _build_py.build_module(self, module, module_file, package)
    
      File "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/command/build_py.py", line 333, in build_module
    
        "'package' must be a string (dot-separated), list, or tuple")
    
    TypeError: 'package' must be a string (dot-separated), list, or tuple
    
    ----------------------------------------
    Cleaning up...
    Command /usr/bin/python -c "import setuptools, tokenize;__file__=u'/private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyQtGraph/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" install --record /var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip-fXqV0Z-record/install-record.txt --single-version-externally-managed --compile --user failed with error code 1 in /private/var/folders/wh/wvw3wp_946j4rk609p3qdmxh0000gn/T/pip_build_spurdy/PyQtGraph
    Storing debug log for failure in /Users/spurdy/Library/Logs/pip.log
    
    opened by scottpurdy 3
  • Cannot delete node in hierarchy

    Cannot delete node in hierarchy

    Here is a video of the bug.

    Here is the stack trace.

    › nustudio
    2014-09-09 17:09:04.813 Python[93147:d07] modalSession has been exited prematurely - check for a reentrant call to endModalSession:
    2014-09-09 17:09:13.119 Python[93147:d07] modalSession has been exited prematurely - check for a reentrant call to endModalSession:
    Traceback (most recent call last):
      File "/usr/local/lib/python2.7/site-packages/nustudio/ui/node_selector_form.py", line 336, in __menuNodeDelete_Click
        self.underMouseNode.delete()
      File "/usr/local/lib/python2.7/site-packages/nustudio/htm/node.py", line 106, in delete
        self.parentNode.children.remove(self)
    AttributeError: 'builtin_function_or_method' object has no attribute 'remove'
    
    opened by rhyolight 3
  • Get objects status from Network class rather Spatial or Temporal classes

    Get objects status from Network class rather Spatial or Temporal classes

    Some compatibility issues are rising because nupic.studio handles a older version of nupic and newer nupic versions change/remove sometimes their fields which raises errors. Future plans include handle directly nupic.network class by get neural objects and their status. This would decreasing the compatibility issues at every new nupic version. In the meantime I recommend use nupic version 0.5.4 until this fix be implemented. Any help is welcome!

    opened by david-ragazzi 14
  • Errors on initializing

    Errors on initializing

    Hi, I am new to NuPIC. I feel nupic_studio is a faster way to use and understand the concepts. I install nupic_studio following the instructions in the wiki and was following the simulation section in wiki, wanted to try and example project but when clicking on the Initialize button after opening a project I get following errors: Traceback (most recent call last): File "/home/gihan/nupic.studio-master/nupic_studio/ui/main_form.py", line 465, in __buttonInitHTM_Click initialized = Global.project.network.initialize() File "/home/gihan/nupic.studio-master/nupic_studio/htm/network.py", line 54, in initialize initialized = node.initialize() File "/home/gihan/nupic.studio-master/nupic_studio/htm/node_region.py", line 229, in initialize spVerbosity = False) TypeError: init() got an unexpected keyword argument 'maxBoost'

    I used virtualenv with python2.7 I install nupic using the command pip install nupic and PyQt4 by using apt-get install python-qt4 python-qt4-gl

    I really appreciate if someone can provide me with a solution, thank you verymuch

    opened by gihanmendis 1
  • error when installing nupic studio

    error when installing nupic studio

    Collecting nupic-studio /usr/local/lib/python2.7/dist-packages/pip/vendor/requests/packages/urllib3/util/ssl.py:315: SNIMissingWarning: An HTTPS request has been made, but the SNI (Subject Name Indication) extension to TLS is not available on this platform. This may cause the server to present an incorrect TLS certificate, which can cause validation failures. For more information, see https://urllib3.readthedocs.org/en/latest/security.html#snimissingwarning. SNIMissingWarning /usr/local/lib/python2.7/dist-packages/pip/vendor/requests/packages/urllib3/util/ssl.py:120: InsecurePlatformWarning: A true SSLContext object is not available. This prevents urllib3 from configuring SSL appropriately and may cause certain SSL connections to fail. For more information, see https://urllib3.readthedocs.org/en/latest/security.html#insecureplatformwarning. InsecurePlatformWarning Using cached nupic_studio-1.1.3.tar.gz Could not import setuptools which is required to install from a source distribution. Traceback (most recent call last): File "/usr/local/lib/python2.7/dist-packages/pip/req/req_install.py", line 377, in setup_py import setuptools # noqa File "/usr/local/lib/python2.7/dist-packages/setuptools/init.py", line 11, in from setuptools.extern.six.moves import filterfalse, map File "/usr/local/lib/python2.7/dist-packages/setuptools/extern/init.py", line 1, in from pkg_resources.extern import VendorImporter ImportError: No module named extern

    opened by Rob1123 0
  • cannot run the simulation

    cannot run the simulation

    I have installed nupic_studio under ubuntu successfully.

    but when I open a project and click on the 'forward one time step' button, python throws out an error which says "TypeError: 'SynapseData' object is not iterable", and nothing works.

    as I am totally a newbie to programming, I am so so thankful if any suggestions could be given to solve this problem.

    opened by cc5985 1
  • could not install nupic-studio with pip

    could not install nupic-studio with pip

    Nupic-studio installation is only installing PyOpenGl again every time, not nupic-studio. I had no time yet verifying this on my desktop machine, but I want it installed on my laptop either way.

    (dependencies, python-qt4 and python-qt4-gl got installed with apt already)

    this is the output:

    bz@bz-away ~ $ pip install nupic-studio --user
    Requirement already satisfied (use --upgrade to upgrade): nupic-studio in ./.local/lib/python2.7/site-packages
    Downloading/unpacking PyOpenGL==3.1.0 (from nupic-studio)
      Downloading PyOpenGL-3.1.0.tar.gz (1.2MB): 1.2MB downloaded
      Running setup.py (path:/tmp/pip_build_bz/PyOpenGL/setup.py) egg_info for package PyOpenGL
    
        warning: no previously-included files matching '*.odt' found anywhere in distribution
        warning: no previously-included files matching '*.odp' found anywhere in distribution
        warning: no previously-included files matching '.cvsignore' found anywhere in distribution
        warning: no previously-included files matching '*.diff' found anywhere in distribution
        warning: no previously-included files found matching 'src/*.h'
        warning: no previously-included files found matching 'src/*.xml'
        warning: no previously-included files found matching 'src/*.zip'
        warning: no previously-included files found matching 'src/*.pdf'
        warning: no previously-included files found matching 'src/*.zip'
        warning: no previously-included files found matching 'src/*.txt'
        warning: no files found matching 'src/win32deps.py'
        warning: no files found matching 'src/toglinstall/get_togl.py'
        warning: no files found matching 'metadata.py'
        warning: no files found matching 'ChangeLog.txt'
        warning: no previously-included files found matching 'OpenGL_accelerate'
    Requirement already satisfied (use --upgrade to upgrade): pyqtgraph==0.9.10 in ./.local/lib/python2.7/site-packages (from nupic-studio)
    Requirement already satisfied (use --upgrade to upgrade): numpy in /usr/lib/python2.7/dist-packages (from pyqtgraph==0.9.10->nupic-studio)
    Installing collected packages: PyOpenGL
      Running setup.py install for PyOpenGL
    
        warning: no previously-included files matching '*.odt' found anywhere in distribution
        warning: no previously-included files matching '*.odp' found anywhere in distribution
        warning: no previously-included files matching '.cvsignore' found anywhere in distribution
        warning: no previously-included files matching '*.diff' found anywhere in distribution
        warning: no previously-included files found matching 'src/*.h'
        warning: no previously-included files found matching 'src/*.xml'
        warning: no previously-included files found matching 'src/*.zip'
        warning: no previously-included files found matching 'src/*.pdf'
        warning: no previously-included files found matching 'src/*.zip'
        warning: no previously-included files found matching 'src/*.txt'
        warning: no files found matching 'src/win32deps.py'
        warning: no files found matching 'src/toglinstall/get_togl.py'
        warning: no files found matching 'metadata.py'
        warning: no files found matching 'ChangeLog.txt'
        warning: no previously-included files found matching 'OpenGL_accelerate'
    Successfully installed PyOpenGL
    Cleaning up...
    bz@bz-away ~ $ nupic-studio
    nupic-studio: command not found
    bz@bz-away ~ $ 
    
    opened by fkarg 2
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