💀mummify: a version control tool for machine learning

Overview

mummify

Dependencies Travis PyPI Downloads

About

mummify is a version control tool for machine learning. It's simple, fast, and designed for model prototyping.

Quickstart

quickstart

Usage

Add mummify.log( ) to the bottom of a machine learning model:

from sklearn.datasets import load_wine
from sklearn.neighbors import KNeighborsClassifier

import mummify

data = load_wine()
X, y = data.data, data.target

model = KNeighborsClassifier(n_neighbors=4)
model.fit(X, y)
accuracy = round(model.score(X, y), 4)

mummify.log(f'Accuracy: {accuracy}')

Run the model at the command line:

python model.py

Edit the model to implement another algorithm:

...
model = LogisticRegression()
model.fit(X, y)
accuracy = round(model.score(X, y), 4)

mummify.log(f'Accuracy: {accuracy}')

Inspect model history at the command line with:

mummify history

And peek at the logged messages at the command line with:

cat mummify.log

Switch to an earlier version of the model:

mummify switch <id>

mummify will persist snapshots and the mummify.log file between switches.

Installation

pip install mummify

Contribute

For feature requests or bug reports, please use Github Issues

Comments
  • Bump urllib3 from 1.25.6 to 1.25.8

    Bump urllib3 from 1.25.6 to 1.25.8

    Bumps urllib3 from 1.25.6 to 1.25.8.

    Release notes

    Sourced from urllib3's releases.

    1.25.8

    Release: 1.25.8

    1.25.7

    No release notes provided.

    Changelog

    Sourced from urllib3's changelog.

    1.25.8 (2020-01-20)

    • Drop support for EOL Python 3.4 (Pull #1774)

    • Optimize _encode_invalid_chars (Pull #1787)

    1.25.7 (2019-11-11)

    • Preserve chunked parameter on retries (Pull #1715, Pull #1734)

    • Allow unset SERVER_SOFTWARE in App Engine (Pull #1704, Issue #1470)

    • Fix issue where URL fragment was sent within the request target. (Pull #1732)

    • Fix issue where an empty query section in a URL would fail to parse. (Pull #1732)

    • Remove TLS 1.3 support in SecureTransport due to Apple removing support (Pull #1703)

    Commits
    • 2a57bc5 Release 1.25.8 (#1788)
    • a2697e7 Optimize _encode_invalid_chars (#1787)
    • d2a5a59 Move IPv6 test skips in server fixtures
    • d44f0e5 Factorize test certificates serialization
    • 84abc7f Generate IPV6 certificates using trustme
    • 6a15b18 Run IPv6 Tornado server from fixture
    • 4903840 Use trustme to generate IP_SAN cert
    • 9971e27 Empty responses should have no lines.
    • 62ef68e Use trustme to generate NO_SAN certs
    • fd2666e Use fixture to configure NO_SAN test certs
    • Additional commits viewable in compare view

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    dependencies 
    opened by dependabot[bot] 1
  • Bump certifi from 2019.9.11 to 2022.12.7

    Bump certifi from 2019.9.11 to 2022.12.7

    Bumps certifi from 2019.9.11 to 2022.12.7.

    Commits

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    dependencies 
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  • Bump mako from 1.1.0 to 1.2.2

    Bump mako from 1.1.0 to 1.2.2

    Bumps mako from 1.1.0 to 1.2.2.

    Release notes

    Sourced from mako's releases.

    1.2.2

    Released: Mon Aug 29 2022

    bug

    • [bug] [lexer] Fixed issue in lexer where the regexp used to match tags would not correctly interpret quoted sections individually. While this parsing issue still produced the same expected tag structure later on, the mis-handling of quoted sections was also subject to a regexp crash if a tag had a large number of quotes within its quoted sections.

      References: #366

    1.2.1

    Released: Thu Jun 30 2022

    bug

    • [bug] [tests] Various fixes to the test suite in the area of exception message rendering to accommodate for variability in Python versions as well as Pygments.

      References: #360

    misc

    • [performance] Optimized some codepaths within the lexer/Python code generation process, improving performance for generation of templates prior to their being cached. Pull request courtesy Takuto Ikuta.

      References: #361

    1.2.0

    Released: Thu Mar 10 2022

    changed

    • [changed] [py3k] Corrected "universal wheel" directive in setup.cfg so that building a wheel does not target Python 2.

      References: #351

    • [changed] [py3k] The bytestring_passthrough template argument is removed, as this flag only applied to Python 2.

    ... (truncated)

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    dependencies 
    opened by dependabot[bot] 0
  • Bump urllib3 from 1.25.6 to 1.26.5

    Bump urllib3 from 1.25.6 to 1.26.5

    Bumps urllib3 from 1.25.6 to 1.26.5.

    Release notes

    Sourced from urllib3's releases.

    1.26.5

    :warning: IMPORTANT: urllib3 v2.0 will drop support for Python 2: Read more in the v2.0 Roadmap

    • Fixed deprecation warnings emitted in Python 3.10.
    • Updated vendored six library to 1.16.0.
    • Improved performance of URL parser when splitting the authority component.

    If you or your organization rely on urllib3 consider supporting us via GitHub Sponsors

    1.26.4

    :warning: IMPORTANT: urllib3 v2.0 will drop support for Python 2: Read more in the v2.0 Roadmap

    • Changed behavior of the default SSLContext when connecting to HTTPS proxy during HTTPS requests. The default SSLContext now sets check_hostname=True.

    If you or your organization rely on urllib3 consider supporting us via GitHub Sponsors

    1.26.3

    :warning: IMPORTANT: urllib3 v2.0 will drop support for Python 2: Read more in the v2.0 Roadmap

    • Fixed bytes and string comparison issue with headers (Pull #2141)

    • Changed ProxySchemeUnknown error message to be more actionable if the user supplies a proxy URL without a scheme (Pull #2107)

    If you or your organization rely on urllib3 consider supporting us via GitHub Sponsors

    1.26.2

    :warning: IMPORTANT: urllib3 v2.0 will drop support for Python 2: Read more in the v2.0 Roadmap

    • Fixed an issue where wrap_socket and CERT_REQUIRED wouldn't be imported properly on Python 2.7.8 and earlier (Pull #2052)

    1.26.1

    :warning: IMPORTANT: urllib3 v2.0 will drop support for Python 2: Read more in the v2.0 Roadmap

    • Fixed an issue where two User-Agent headers would be sent if a User-Agent header key is passed as bytes (Pull #2047)

    1.26.0

    :warning: IMPORTANT: urllib3 v2.0 will drop support for Python 2: Read more in the v2.0 Roadmap

    • Added support for HTTPS proxies contacting HTTPS servers (Pull #1923, Pull #1806)

    • Deprecated negotiating TLSv1 and TLSv1.1 by default. Users that still wish to use TLS earlier than 1.2 without a deprecation warning should opt-in explicitly by setting ssl_version=ssl.PROTOCOL_TLSv1_1 (Pull #2002) Starting in urllib3 v2.0: Connections that receive a DeprecationWarning will fail

    • Deprecated Retry options Retry.DEFAULT_METHOD_WHITELIST, Retry.DEFAULT_REDIRECT_HEADERS_BLACKLIST and Retry(method_whitelist=...) in favor of Retry.DEFAULT_ALLOWED_METHODS, Retry.DEFAULT_REMOVE_HEADERS_ON_REDIRECT, and Retry(allowed_methods=...) (Pull #2000) Starting in urllib3 v2.0: Deprecated options will be removed

    ... (truncated)

    Changelog

    Sourced from urllib3's changelog.

    1.26.5 (2021-05-26)

    • Fixed deprecation warnings emitted in Python 3.10.
    • Updated vendored six library to 1.16.0.
    • Improved performance of URL parser when splitting the authority component.

    1.26.4 (2021-03-15)

    • Changed behavior of the default SSLContext when connecting to HTTPS proxy during HTTPS requests. The default SSLContext now sets check_hostname=True.

    1.26.3 (2021-01-26)

    • Fixed bytes and string comparison issue with headers (Pull #2141)

    • Changed ProxySchemeUnknown error message to be more actionable if the user supplies a proxy URL without a scheme. (Pull #2107)

    1.26.2 (2020-11-12)

    • Fixed an issue where wrap_socket and CERT_REQUIRED wouldn't be imported properly on Python 2.7.8 and earlier (Pull #2052)

    1.26.1 (2020-11-11)

    • Fixed an issue where two User-Agent headers would be sent if a User-Agent header key is passed as bytes (Pull #2047)

    1.26.0 (2020-11-10)

    • NOTE: urllib3 v2.0 will drop support for Python 2. Read more in the v2.0 Roadmap <https://urllib3.readthedocs.io/en/latest/v2-roadmap.html>_.

    • Added support for HTTPS proxies contacting HTTPS servers (Pull #1923, Pull #1806)

    • Deprecated negotiating TLSv1 and TLSv1.1 by default. Users that still wish to use TLS earlier than 1.2 without a deprecation warning

    ... (truncated)

    Commits
    • d161647 Release 1.26.5
    • 2d4a3fe Improve performance of sub-authority splitting in URL
    • 2698537 Update vendored six to 1.16.0
    • 07bed79 Fix deprecation warnings for Python 3.10 ssl module
    • d725a9b Add Python 3.10 to GitHub Actions
    • 339ad34 Use pytest==6.2.4 on Python 3.10+
    • f271c9c Apply latest Black formatting
    • 1884878 [1.26] Properly proxy EOF on the SSLTransport test suite
    • a891304 Release 1.26.4
    • 8d65ea1 Merge pull request from GHSA-5phf-pp7p-vc2r
    • Additional commits viewable in compare view

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    dependencies 
    opened by dependabot[bot] 0
  • Bump pygments from 2.4.2 to 2.7.4

    Bump pygments from 2.4.2 to 2.7.4

    Bumps pygments from 2.4.2 to 2.7.4.

    Release notes

    Sourced from pygments's releases.

    2.7.4

    • Updated lexers:

      • Apache configurations: Improve handling of malformed tags (#1656)

      • CSS: Add support for variables (#1633, #1666)

      • Crystal (#1650, #1670)

      • Coq (#1648)

      • Fortran: Add missing keywords (#1635, #1665)

      • Ini (#1624)

      • JavaScript and variants (#1647 -- missing regex flags, #1651)

      • Markdown (#1623, #1617)

      • Shell

        • Lex trailing whitespace as part of the prompt (#1645)
        • Add missing in keyword (#1652)
      • SQL - Fix keywords (#1668)

      • Typescript: Fix incorrect punctuation handling (#1510, #1511)

    • Fix infinite loop in SML lexer (#1625)

    • Fix backtracking string regexes in JavaScript/TypeScript, Modula2 and many other lexers (#1637)

    • Limit recursion with nesting Ruby heredocs (#1638)

    • Fix a few inefficient regexes for guessing lexers

    • Fix the raw token lexer handling of Unicode (#1616)

    • Revert a private API change in the HTML formatter (#1655) -- please note that private APIs remain subject to change!

    • Fix several exponential/cubic-complexity regexes found by Ben Caller/Doyensec (#1675)

    • Fix incorrect MATLAB example (#1582)

    Thanks to Google's OSS-Fuzz project for finding many of these bugs.

    2.7.3

    ... (truncated)

    Changelog

    Sourced from pygments's changelog.

    Version 2.7.4

    (released January 12, 2021)

    • Updated lexers:

      • Apache configurations: Improve handling of malformed tags (#1656)

      • CSS: Add support for variables (#1633, #1666)

      • Crystal (#1650, #1670)

      • Coq (#1648)

      • Fortran: Add missing keywords (#1635, #1665)

      • Ini (#1624)

      • JavaScript and variants (#1647 -- missing regex flags, #1651)

      • Markdown (#1623, #1617)

      • Shell

        • Lex trailing whitespace as part of the prompt (#1645)
        • Add missing in keyword (#1652)
      • SQL - Fix keywords (#1668)

      • Typescript: Fix incorrect punctuation handling (#1510, #1511)

    • Fix infinite loop in SML lexer (#1625)

    • Fix backtracking string regexes in JavaScript/TypeScript, Modula2 and many other lexers (#1637)

    • Limit recursion with nesting Ruby heredocs (#1638)

    • Fix a few inefficient regexes for guessing lexers

    • Fix the raw token lexer handling of Unicode (#1616)

    • Revert a private API change in the HTML formatter (#1655) -- please note that private APIs remain subject to change!

    • Fix several exponential/cubic-complexity regexes found by Ben Caller/Doyensec (#1675)

    • Fix incorrect MATLAB example (#1582)

    Thanks to Google's OSS-Fuzz project for finding many of these bugs.

    Version 2.7.3

    (released December 6, 2020)

    ... (truncated)

    Commits
    • 4d555d0 Bump version to 2.7.4.
    • fc3b05d Update CHANGES.
    • ad21935 Revert "Added dracula theme style (#1636)"
    • e411506 Prepare for 2.7.4 release.
    • 275e34d doc: remove Perl 6 ref
    • 2e7e8c4 Fix several exponential/cubic complexity regexes found by Ben Caller/Doyensec
    • eb39c43 xquery: fix pop from empty stack
    • 2738778 fix coding style in test_analyzer_lexer
    • 02e0f09 Added 'ERROR STOP' to fortran.py keywords. (#1665)
    • c83fe48 support added for css variables (#1633)
    • Additional commits viewable in compare view

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    dependencies 
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  • Bump pyyaml from 5.1.2 to 5.4

    Bump pyyaml from 5.1.2 to 5.4

    Bumps pyyaml from 5.1.2 to 5.4.

    Changelog

    Sourced from pyyaml's changelog.

    5.4 (2021-01-19)

    5.3.1 (2020-03-18)

    • yaml/pyyaml#386 -- Prevents arbitrary code execution during python/object/new constructor

    5.3 (2020-01-06)

    5.2 (2019-12-02)

    • Repair incompatibilities introduced with 5.1. The default Loader was changed, but several methods like add_constructor still used the old default yaml/pyyaml#279 -- A more flexible fix for custom tag constructors yaml/pyyaml#287 -- Change default loader for yaml.add_constructor yaml/pyyaml#305 -- Change default loader for add_implicit_resolver, add_path_resolver
    • Make FullLoader safer by removing python/object/apply from the default FullLoader yaml/pyyaml#347 -- Move constructor for object/apply to UnsafeConstructor
    • Fix bug introduced in 5.1 where quoting went wrong on systems with sys.maxunicode <= 0xffff yaml/pyyaml#276 -- Fix logic for quoting special characters
    • Other PRs: yaml/pyyaml#280 -- Update CHANGES for 5.1
    Commits
    • 58d0cb7 5.4 release
    • a60f7a1 Fix compatibility with Jython
    • ee98abd Run CI on PR base branch changes
    • ddf2033 constructor.timezone: _copy & deepcopy
    • fc914d5 Avoid repeatedly appending to yaml_implicit_resolvers
    • a001f27 Fix for CVE-2020-14343
    • fe15062 Add 3.9 to appveyor file for completeness sake
    • 1e1c7fb Add a newline character to end of pyproject.toml
    • 0b6b7d6 Start sentences and phrases for capital letters
    • c976915 Shell code improvements
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    dependencies 
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  • Bump jinja2 from 2.10.1 to 2.11.3

    Bump jinja2 from 2.10.1 to 2.11.3

    Bumps jinja2 from 2.10.1 to 2.11.3.

    Release notes

    Sourced from jinja2's releases.

    2.11.3

    This contains a fix for a speed issue with the urlize filter. urlize is likely to be called on untrusted user input. For certain inputs some of the regular expressions used to parse the text could take a very long time due to backtracking. As part of the fix, the email matching became slightly stricter. The various speedups apply to urlize in general, not just the specific input cases.

    2.11.2

    2.11.1

    This fixes an issue in async environment when indexing the result of an attribute lookup, like {{ data.items[1:] }}.

    2.11.0

    This is the last version to support Python 2.7 and 3.5. The next version will be Jinja 3.0 and will support Python 3.6 and newer.

    2.10.3

    2.10.2

    Changelog

    Sourced from jinja2's changelog.

    Version 2.11.3

    Released 2021-01-31

    • Improve the speed of the urlize filter by reducing regex backtracking. Email matching requires a word character at the start of the domain part, and only word characters in the TLD. :pr:1343

    Version 2.11.2

    Released 2020-04-13

    • Fix a bug that caused callable objects with __getattr__, like :class:~unittest.mock.Mock to be treated as a :func:contextfunction. :issue:1145
    • Update wordcount filter to trigger :class:Undefined methods by wrapping the input in :func:soft_str. :pr:1160
    • Fix a hang when displaying tracebacks on Python 32-bit. :issue:1162
    • Showing an undefined error for an object that raises AttributeError on access doesn't cause a recursion error. :issue:1177
    • Revert changes to :class:~loaders.PackageLoader from 2.10 which removed the dependency on setuptools and pkg_resources, and added limited support for namespace packages. The changes caused issues when using Pytest. Due to the difficulty in supporting Python 2 and :pep:451 simultaneously, the changes are reverted until 3.0. :pr:1182
    • Fix line numbers in error messages when newlines are stripped. :pr:1178
    • The special namespace() assignment object in templates works in async environments. :issue:1180
    • Fix whitespace being removed before tags in the middle of lines when lstrip_blocks is enabled. :issue:1138
    • :class:~nativetypes.NativeEnvironment doesn't evaluate intermediate strings during rendering. This prevents early evaluation which could change the value of an expression. :issue:1186

    Version 2.11.1

    Released 2020-01-30

    • Fix a bug that prevented looking up a key after an attribute ({{ data.items[1:] }}) in an async template. :issue:1141

    ... (truncated)

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