This is the repository for the paper "Have I done enough planning or should I plan more?"

Overview

Metacognitive Learning Tool box

https://re.is.mpg.de

What Is This?

This repository contains two modules used to analyse metacognitive learning in human. src/computationa_microscope contains the code for the computational microscope src/mcrl_modelling contains the code to fit the metacognitive reinforcement learning models (MCRL) to the data.

How To Use This

Installation

To install as a package in python 3.8+:

git clone https://github.com/RationalityEnhancement/mcl_toolbox.git
pip install -e .
cd mcl_toolbox

Import data

Assuming you are working with the Mouselab-MDP repository and with a postgres database:

  1. Navigate to src/import_data
  2. Put your dataclip (csv file) in the folder src/import_data/data
  3. Run src/import_data/reformat_csv.py to create the required mouselab-mdp.csv and participants.csv for each condition as well as an overall file

Note: you might have to use your own import code depending on your requirements.

Analysis modules

  1. Navigate to mcl_toolbox/
  2. Run python mcl_toolbox/infer_participant_sequences.py to analyse the click sequence of each participant
  3. Run python mcl_toolbox/infer_sequences.py to analyse the click sequence average over conditions
  4. Run python mcl_toolbox/fit_mcrl_models.py to fit the MCRL models

Note: see each folder or each file for detailed instructions.

Testing

There are very simple integration tests in tests/ to run analysis modules quickly to check whether analysis modules will run. To run these, run:

chmod +x test_analysis.sh
./test_analysis.sh

#TODO unit tests

Development

Please fork your own feature branch and merge in the dev branch.

You might also like...
Repository for the COLING 2020 paper "Explainable Automated Fact-Checking: A Survey."

Explainable Fact Checking: A Survey This repository and the accompanying webpage contain resources for the paper "Explainable Fact Checking: A Survey"

Repository relating to the CVPR21 paper TimeLens: Event-based Video Frame Interpolation
Repository relating to the CVPR21 paper TimeLens: Event-based Video Frame Interpolation

TimeLens: Event-based Video Frame Interpolation This repository is about the High Speed Event and RGB (HS-ERGB) dataset, used in the 2021 CVPR paper T

This repository is an open-source implementation of the ICRA 2021 paper: Locus: LiDAR-based Place Recognition using Spatiotemporal Higher-Order Pooling.
This repository is an open-source implementation of the ICRA 2021 paper: Locus: LiDAR-based Place Recognition using Spatiotemporal Higher-Order Pooling.

Locus This repository is an open-source implementation of the ICRA 2021 paper: Locus: LiDAR-based Place Recognition using Spatiotemporal Higher-Order

This repository holds the code for the paper "Deep Conditional Gaussian Mixture Model forConstrained Clustering".

Deep Conditional Gaussian Mixture Model for Constrained Clustering. This repository holds the code for the paper Deep Conditional Gaussian Mixture Mod

CVPR 2021 - Official code repository for the paper: On Self-Contact and Human Pose.
CVPR 2021 - Official code repository for the paper: On Self-Contact and Human Pose.

selfcontact This repo is part of our project: On Self-Contact and Human Pose. [Project Page] [Paper] [MPI Project Page] It includes the main function

CVPR 2021 - Official code repository for the paper: On Self-Contact and Human Pose.
CVPR 2021 - Official code repository for the paper: On Self-Contact and Human Pose.

SMPLify-XMC This repo is part of our project: On Self-Contact and Human Pose. [Project Page] [Paper] [MPI Project Page] License Software Copyright Lic

This repository contains the code for the paper
This repository contains the code for the paper "Hierarchical Motion Understanding via Motion Programs"

Hierarchical Motion Understanding via Motion Programs (CVPR 2021) This repository contains the official implementation of: Hierarchical Motion Underst

Official repository for the paper "Going Beyond Linear Transformers with Recurrent Fast Weight Programmers"

Recurrent Fast Weight Programmers This is the official repository containing the code we used to produce the experimental results reported in the pape

Owner
null
Open source repository for the code accompanying the paper 'Non-Rigid Neural Radiance Fields Reconstruction and Novel View Synthesis of a Deforming Scene from Monocular Video'.

Non-Rigid Neural Radiance Fields This is the official repository for the project "Non-Rigid Neural Radiance Fields: Reconstruction and Novel View Synt

Facebook Research 296 Dec 29, 2022
A code repository associated with the paper A Benchmark for Rough Sketch Cleanup by Chuan Yan, David Vanderhaeghe, and Yotam Gingold from SIGGRAPH Asia 2020.

A Benchmark for Rough Sketch Cleanup This is the code repository associated with the paper A Benchmark for Rough Sketch Cleanup by Chuan Yan, David Va

null 33 Dec 18, 2022
Repository for the paper "PoseAug: A Differentiable Pose Augmentation Framework for 3D Human Pose Estimation", CVPR 2021.

PoseAug: A Differentiable Pose Augmentation Framework for 3D Human Pose Estimation Code repository for the paper: PoseAug: A Differentiable Pose Augme

Pyjcsx 328 Dec 17, 2022
Offcial repository for the IEEE ICRA 2021 paper Auto-Tuned Sim-to-Real Transfer.

Offcial repository for the IEEE ICRA 2021 paper Auto-Tuned Sim-to-Real Transfer.

null 47 Jun 30, 2022
Code repository for paper `Skeleton Merger: an Unsupervised Aligned Keypoint Detector`.

Skeleton Merger Skeleton Merger, an Unsupervised Aligned Keypoint Detector. The paper is available at https://arxiv.org/abs/2103.10814. A map of the r

北海若 48 Nov 14, 2022
Official repository for the ICLR 2021 paper Evaluating the Disentanglement of Deep Generative Models with Manifold Topology

Official repository for the ICLR 2021 paper Evaluating the Disentanglement of Deep Generative Models with Manifold Topology Sharon Zhou, Eric Zelikman

Stanford Machine Learning Group 34 Nov 16, 2022
The repository offers the official implementation of our paper in PyTorch.

Cloth Interactive Transformer (CIT) Cloth Interactive Transformer for Virtual Try-On Bin Ren1, Hao Tang1, Fanyang Meng2, Runwei Ding3, Ling Shao4, Phi

Bingoren 49 Dec 1, 2022
Repository of our paper 'Refer-it-in-RGBD' in CVPR 2021

Refer-it-in-RGBD This is the repository of our paper 'Refer-it-in-RGBD: A Bottom-up Approach for 3D Visual Grounding in RGBD Images' in CVPR 2021 Pape

Haolin Liu 34 Nov 7, 2022
Official code repository of the paper Learning Associative Inference Using Fast Weight Memory by Schlag et al.

Learning Associative Inference Using Fast Weight Memory This repository contains the offical code for the paper Learning Associative Inference Using F

Imanol Schlag 18 Oct 12, 2022
Repository for the "Gotta Go Fast When Generating Data with Score-Based Models" paper

Gotta Go Fast When Generating Data with Score-Based Models This repo contains the official implementation for the paper Gotta Go Fast When Generating

Alexia Jolicoeur-Martineau 89 Nov 9, 2022