This repo stores the codes for topic modeling on palliative care journals.

Last update: Dec 20, 2022

Overview

This repo stores the codes for topic modeling on palliative care journals.

Data Preparation

You first need to download the journal papers.

bash 1_download_pdfs.sh # To download papers from the journal `jpm`
bash 1_download_pdfs_jwh.sh # To download papers from the journal `jwh`

Environment Setup

Install all the necessary python packages.

bash 2_pdf2json_prep_env.sh

How to Run the Topic Model

Run the topic modeling on the default journal jpm:

python 3_pdf2json2topics.py

Or you can also run the topic modeling on the other journal jwh:

python 3_pdf2json2topics.py -journal_name jwh

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Owner

PhD in NLP & Causality. Affiliated with Max Planck Institute, Germany & ETH & UMich. Supervised by Bernhard Schoelkopf, Rada Mihalcea, and Mrinmaya Sachan.

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