9 Repositories
Python pubmed Libraries
SciFive: a text-text transformer model for biomedical literature
SciFive SciFive provided a Text-Text framework for biomedical language and natural language in NLP. Under the T5's framework and desrbibed in the pape
54 Dec 24, 2022
Parse URLs for DOIs, PubMed identifiers, PMC identifiers, arXiv identifiers, etc.
citation-url Parse URLs for DOIs, PubMed identifiers, PMC identifiers, arXiv identifiers, etc. This module has a single parse() function that takes in
2 Feb 12, 2022
Fetch papers and metadata.
Fetch PubMed Central for open-access papers as well as Sci-Hub
4 Oct 31, 2022
MeSH2Matrix - A set of Python codes for the generation of biomedical ontologies from the MeSH keywords of the PubMed scholarly publications
A set of Python codes for the generation of biomedical ontologies from the MeSH keywords of the PubMed scholarly publications
6 Nov 30, 2022
A natural language processing model for sequential sentence classification in medical abstracts.
NLP PubMed Medical Research Paper Abstract (Randomized Controlled Trial) A natural language processing model for sequential sentence classification in
1 Jan 17, 2022
pubmex.py - a script to get a fancy paper title based on given DOI or PMID
pubmex.py is a script to get a fancy paper title based on given DOI or PMID (can be also combined with macOS Finder)
13 Nov 20, 2022
doi, pubmed, arxiv.org的查询服务API接口，部署于vercel云函数
article-search-service doi, pubmed, arxiv.org的查询服务API接口，部署于vercel云函数 云函数 vercel，国内可能被qiang了。 DOI接口 POST https://article-search-service.vercel.app/api/
2 Oct 10, 2021
PubMed Mapper: A Python library that map PubMed XML to Python object
pubmed-mapper: A Python Library that map PubMed XML to Python object 中文文档 1. Philosophy view UML Programmatically access PubMed article is a common ta
33 Dec 8, 2022
PyMed is a Python library that provides access to PubMed.
IMPORTANT NOTE: I don't have time to maintain this library (as some of you might have noticed). The PubMed API is a little chaotic, without a clear do
143 Dec 21, 2022