2 Repositories
Python squidpy Libraries
Learning cell communication from spatial graphs of cells
ncem Features Repository for the manuscript Fischer, D. S., Schaar, A. C. and Theis, F. Learning cell communication from spatial graphs of cells. 2021
77 Dec 30, 2022
Squidpy is a tool for the analysis and visualization of spatial molecular data.
Squidpy is a tool for the analysis and visualization of spatial molecular data. It builds on top of scanpy and anndata, from which it inherits modularity and scalability. It provides analysis tools that leverages the spatial coordinates of the data, as well as tissue images if available.
251 Dec 19, 2022