An efficient PyTorch library for Global Wheat Detection using YOLOv5. The project is based on this Kaggle competition Global Wheat Detection (2021).

Overview

Global-Wheat-Detection

An efficient PyTorch library for Global Wheat Detection using YOLOv5. The project is based on this Kaggle competition Global Wheat Detection (May-Aug 2020).

Here's a description of the prediction task:

In this competition, you’ll detect wheat heads from outdoor images of wheat plants, including wheat datasets from around the globe. Using worldwide data, you will focus on a generalized solution to estimate the number and size of wheat heads. To better gauge the performance for unseen genotypes, environments, and observational conditions, the training dataset covers multiple regions. You will use more than 3,000 images from Europe (France, UK, Switzerland) and North America (Canada). The test data includes about 1,000 images from Australia, Japan, and China.

Installation

  1. Create a virtual environment via conda.

    conda create -n wheat_detection python=3.7
    conda activate wheat_detection
  2. Install torch and torchvision.

    conda install pytorch cudatoolkit=10.1 torchvision -c pytorch
  3. Install requirements.

    pip install -r requirements.txt

Dataset

An overview is available here: https://www.kaggle.com/c/global-wheat-detection/data.

Wheat heads were from various sources:
head
A few labeled images are as shown: (Blue bounding boxes):
head head

I used the following command to obtain the data:

kaggle competitions download -c global-wheat-detection

refer to pre_precessing.ipynb to preprocess the dataset:

  • Handled the noisy labels (too big/small boxes etc.)
  • Stratified 5 fold split based on source

Get Started

Please refer to YOLOv5.

Results

Following are the results we got from output files while our model was training.

Here is the PR curve of our model:

Acknowledgement

We thank for the inspiration from YOLOv5 and SENet

If you like our work and use the models for your research, please star our work.

Comments
  • Bump actions/cache from 3.0.7 to 3.2.1

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    • Enhanced the warning message for cache unavailablity in case of GHES.

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    • Fixed #810 - download stuck issue. A new timeout is introduced in the download process to abort the download if it gets stuck and doesn't finish within an hour.

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    • Fix zstd not working for windows on gnu tar in issues #888 and #891.
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    Fixes: Fix date comparison edge case PR/816

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    fixes a bug introduced in #717

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  • Bump actions/cache from 2.1.7 to 3.0.6

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    v3.0.6

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    • Add example for clojure lein project dependencies by @​shivamarora1 in PR actions/cache#835
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    • Fix issue #833 where cache save was not working for caching github workspace directory

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    v3.0.5

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    Fixed avoiding empty cache save when no files are available for caching. (actions/cache#624)

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    3.0.6

    • Fixed #809 - zstd -d: no such file or directory error
    • Fixed #833 - cache doesn't work with github workspace directory
    Commits
    • f427802 Merge pull request #887 from actions/pdotl-version-patch
    • 9916fe1 Update cache version in licences
    • 318935e Update README and RELEASES
    • 85efbb5 Update cache npm module to latest
    • 4387dbc Merge pull request #835 from shivamarora1/clojure-lein-example
    • 71e3ee5 Add phantsure to PR reviewers
    • c316eb7 Add phantsure to issue assignment
    • 0865c47 new release (#855)
    • 354a2ae Consuming 3.0 actions/cache (#834)
    • baed351 Merge pull request #530 from axelson/document-where-to-cache
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  • Bump actions/cache from 2.1.7 to 3.0.5

    Bump actions/cache from 2.1.7 to 3.0.5

    Bumps actions/cache from 2.1.7 to 3.0.5.

    Release notes

    Sourced from actions/cache's releases.

    v3.0.5

    Removed error handling by consuming actions/cache 3.0 toolkit, Now cache server error handling will be done by toolkit.

    v3.0.4

    In this release, we have fixed the tar creation error while trying to create it with path as ~/ home folder on ubuntu-latest.

    v3.0.3

    Fixed avoiding empty cache save when no files are available for caching. (actions/cache#624)

    v3.0.2

    This release adds the support for dynamic cache size cap on GHES.

    v3.0.1

    • Added support for caching from GHES 3.5.
    • Fixed download issue for files > 2GB during restore.

    v3.0.0

    • This change adds a minimum runner version(node12 -> node16), which can break users using an out-of-date/fork of the runner. This would be most commonly affecting users on GHES 3.3 or before, as those runners do not support node16 actions and they can use actions from github.com via github connect or manually copying the repo to their GHES instance.

    • Few dependencies and cache action usage examples have also been updated.

    Changelog

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    3.0.5

    • Removed error handling by consuming actions/cache 3.0 toolkit, Now cache server error handling will be done by toolkit. (PR)
    Commits
    • 0865c47 new release (#855)
    • 354a2ae Consuming 3.0 actions/cache (#834)
    • baed351 Merge pull request #530 from axelson/document-where-to-cache
    • 8829e97 Update README.md
    • eec8cd3 Merge pull request #836 from actions/vsvipul/fix-auto-assign
    • 5cc84c0 Add kotewar and remove phantsure from auto-assignees lists
    • afc669e Merge pull request #819 from mpilgrem/haskell-stack-example
    • a0efc56 Use pull_request_target instead of pull_request
    • d25c51b Adapt existing Haskell Stack example for Windows
    • a080a3b Merge pull request #816 from lobis/main
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  • Bump actions/cache from 3.0.7 to 3.2.2

    Bump actions/cache from 3.0.7 to 3.2.2

    Bumps actions/cache from 3.0.7 to 3.2.2.

    Release notes

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    v3.2.2

    What's Changed

    New Contributors

    Full Changelog: https://github.com/actions/cache/compare/v3.2.1...v3.2.2

    v3.2.1

    What's Changed

    Full Changelog: https://github.com/actions/cache/compare/v3.2.0...v3.2.1

    v3.2.0

    What's Changed

    New Contributors

    ... (truncated)

    Changelog

    Sourced from actions/cache's changelog.

    3.0.7

    • Fixed #810 - download stuck issue. A new timeout is introduced in the download process to abort the download if it gets stuck and doesn't finish within an hour.

    3.0.8

    • Fix zstd not working for windows on gnu tar in issues #888 and #891.
    • Allowing users to provide a custom timeout as input for aborting download of a cache segment using an environment variable SEGMENT_DOWNLOAD_TIMEOUT_MINS. Default is 60 minutes.

    3.0.9

    • Enhanced the warning message for cache unavailablity in case of GHES.

    3.0.10

    • Fix a bug with sorting inputs.
    • Update definition for restore-keys in README.md

    3.0.11

    • Update toolkit version to 3.0.5 to include @actions/core@^1.10.0
    • Update @actions/cache to use updated saveState and setOutput functions from @actions/core@^1.10.0

    3.1.0-beta.1

    • Update @actions/cache on windows to use gnu tar and zstd by default and fallback to bsdtar and zstd if gnu tar is not available. (issue)

    3.1.0-beta.2

    • Added support for fallback to gzip to restore old caches on windows.

    3.1.0-beta.3

    • Bug fixes for bsdtar fallback if gnutar not available and gzip fallback if cache saved using old cache action on windows.

    3.2.0-beta.1

    • Added two new actions - restore and save for granular control on cache.

    3.2.0

    • Released the two new actions - restore and save for granular control on cache

    3.2.1

    • Update @actions/cache on windows to use gnu tar and zstd by default and fallback to bsdtar and zstd if gnu tar is not available. (issue)
    • Added support for fallback to gzip to restore old caches on windows.
    • Added logs for cache version in case of a cache miss.

    3.2.2

    • Reverted the changes made in 3.2.1 to use gnu tar and zstd by default on windows.
    Commits
    • 4723a57 Revert compression changes related to windows but keep version logging (#1049)
    • d1507cc Merge pull request #1042 from me-and/correct-readme-re-windows
    • 3337563 Merge branch 'main' into correct-readme-re-windows
    • 60c7666 save/README.md: Fix typo in example (#1040)
    • b053f2b Fix formatting error in restore/README.md (#1044)
    • 501277c README.md: remove outdated Windows cache tip link
    • c1a5de8 Upgrade codeql to v2 (#1023)
    • 9b0be58 Release compression related changes for windows (#1039)
    • c17f4bf GA for granular cache (#1035)
    • ac25611 docs: fix an invalid link in workarounds.md (#929)
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    opened by dependabot[bot] 2
  • Bump actions/stale from 5.1.0 to 7.0.0

    Bump actions/stale from 5.1.0 to 7.0.0

    Bumps actions/stale from 5.1.0 to 7.0.0.

    Release notes

    Sourced from actions/stale's releases.

    v7.0.0

    ⚠️ This version contains breaking changes ⚠️

    What's Changed

    Breaking Changes

    • In this release we prevent this action from managing the stale label on items included in exempt-issue-labels and exempt-pr-labels
    • We decided that this is outside of the scope of this action, and to be left up to the maintainer

    New Contributors

    Full Changelog: https://github.com/actions/stale/compare/v6...v7.0.0

    v6.0.1

    Update @​actions/core to 1.10.0 #839

    Full Changelog: https://github.com/actions/stale/compare/v6.0.0...v6.0.1

    v6.0.0

    :warning: Breaking change :warning:

    Issues/PRs default close-issue-reason is now not_planned(#789)

    V5.2.0

    Features: New option include-only-assigned enables users to process only issues/PRs that are already assigned. If there is no assignees and this option is set, issue will not be processed per: issue/596

    Fixes: Fix date comparison edge case PR/816

    Dependency Updates: PR/812

    Fix issue when days-before-close is more than days-before-stale

    fixes a bug introduced in #717

    fixed in #775

    Changelog

    Sourced from actions/stale's changelog.

    [7.0.0]

    :warning: Breaking change :warning:

    [6.0.1]

    Update @​actions/core to v1.10.0 (#839)

    [6.0.0]

    :warning: Breaking change :warning:

    Issues/PRs default close-issue-reason is now not_planned(#789)

    Commits
    • 6f05e42 draft release for v7.0.0 (#888)
    • eed91cb Update how stale handles exempt items (#874)
    • 10dc265 Merge pull request #880 from akv-platform/update-stale-repo
    • 9c1eb3f Update .md files and allign build-test.yml with the current test.yml
    • bc357bd Update .github/workflows/release-new-action-version.yml
    • 690ede5 Update .github/ISSUE_TEMPLATE/bug_report.md
    • afbcabf Merge branch 'main' into update-stale-repo
    • e364411 Update name of codeql.yml file
    • 627cef3 fix print outputs step (#859)
    • 975308f Merge pull request #876 from jongwooo/chore/use-cache-in-check-dist
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  • Bump cirrus-actions/rebase from 1.7 to 1.8

    Bump cirrus-actions/rebase from 1.7 to 1.8

    Bumps cirrus-actions/rebase from 1.7 to 1.8.

    Release notes

    Sourced from cirrus-actions/rebase's releases.

    1.8

    What's Changed

    New Contributors

    Full Changelog: https://github.com/cirrus-actions/rebase/compare/1.7...1.8

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    opened by dependabot[bot] 2
Owner
Chuxin Wang
Chuxin Wang
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