MRI reconstruction (e.g., QSM) using deep learning methods

Related tags

Deep Learning deep-learning compressed-sensing qsm
Overview

deepMRI: Deep learning methods for MRI

Authors: Yang Gao, Hongfu Sun

  • This repo is devloped based on Pytorch (1.8 or later) and matlab (R2019a or later).

  • The codes in this repo were tested on Centos 7.8 with Nvdia Tesla V100 and macos12.0.1/win10/ubuntu19.10 with GTX 1060

     

Projects

xQSM for QSM dipole inversion

DCRnet for QSM and R2* acceleration

iQSM for single-step instant QSM

     

xQSM for QSM dipole inversion

xQSM: quantitative susceptibility mapping with octave convolutional and noise-regularized neural networks

Whole Framework

source code (github)   |   arXiv (pre-print)   |   NMR in Biomed (full paper)

     

DCRNet for QSM and R2* acceleration

Accelerating quantitative susceptibility and R2* mapping using incoherent undersampling and deep neural network reconstruction

source code (github)   |   arXiv (pre-print)   |   NeuroImage (full paper)

Whole Framework

     

iQSM for single-step instant QSM

Instant tissue field and magnetic susceptibility mapping from MRI raw phase using Laplacian enabled deep neural networks

source code (github)   |   arXiv (pre-print)

Whole Framework

⬆ top

You might also like...
LeafSnap replicated using deep neural networks to test accuracy compared to traditional computer vision methods.

Deep-Leafsnap Convolutional Neural Networks have become largely popular in image tasks such as image classification recently largely due to to Krizhev

Sujith Vishwajith 48 Nov 27, 2022
Python package facilitating the use of Bayesian Deep Learning methods with Variational Inference for PyTorch
Python package facilitating the use of Bayesian Deep Learning methods with Variational Inference for PyTorch

PyVarInf PyVarInf provides facilities to easily train your PyTorch neural network models using variational inference. Bayesian Deep Learning with Vari

null 342 Dec 2, 2022
Use deep learning, genetic programming and other methods to predict stock and market movements

StockPredictions Use classic tricks, neural networks, deep learning, genetic programming and other methods to predict stock and market movements. Both

Linda MacPhee-Cobb 386 Jan 3, 2023
Code for "Intra-hour Photovoltaic Generation Forecasting based on Multi-source Data and Deep Learning Methods."

pv_predict_unet-lstm Code for "Intra-hour Photovoltaic Generation Forecasting based on Multi-source Data and Deep Learning Methods." IEEE Transactions

FolkScientistInDL 8 Oct 8, 2022
Deep Implicit Moving Least-Squares Functions for 3D Reconstruction
Deep Implicit Moving Least-Squares Functions for 3D Reconstruction

DeepMLS: Deep Implicit Moving Least-Squares Functions for 3D Reconstruction This repository contains the implementation of the paper: Deep Implicit Mo

null 103 Dec 22, 2022
Deep Unsupervised 3D SfM Face Reconstruction Based on Massive Landmark Bundle Adjustment.
Deep Unsupervised 3D SfM Face Reconstruction Based on Massive Landmark Bundle Adjustment.

(ACMMM 2021 Oral) SfM Face Reconstruction Based on Massive Landmark Bundle Adjustment This repository shows two tasks: Face landmark detection and Fac

BoomStar 51 Dec 13, 2022
Deep Unsupervised 3D SfM Face Reconstruction Based on Massive Landmark Bundle Adjustment.
Deep Unsupervised 3D SfM Face Reconstruction Based on Massive Landmark Bundle Adjustment.

(ACMMM 2021 Oral) SfM Face Reconstruction Based on Massive Landmark Bundle Adjustment This repository shows two tasks: Face landmark detection and Fac

BoomStar 51 Dec 13, 2022
Deep Surface Reconstruction from Point Clouds with Visibility Information
Deep Surface Reconstruction from Point Clouds with Visibility Information

Data, code and pretrained models for the paper Deep Surface Reconstruction from Point Clouds with Visibility Information.

Raphael Sulzer 23 Jan 4, 2023
Deep learning (neural network) based remote photoplethysmography: how to extract pulse signal from video using deep learning tools

Deep-rPPG: Camera-based pulse estimation using deep learning tools Deep learning (neural network) based remote photoplethysmography: how to extract pu

Terbe Dániel 138 Dec 17, 2022
Owner
Hongfu Sun
MRI and Deep Learning researcher
Hongfu Sun
GitHub
A Planar RGB-D SLAM which utilizes Manhattan World structure to provide optimal camera pose trajectory while also providing a sparse reconstruction containing points, lines and planes, and a dense surfel-based reconstruction.

ManhattanSLAM Authors: Raza Yunus, Yanyan Li and Federico Tombari ManhattanSLAM is a real-time SLAM library for RGB-D cameras that computes the camera

null 117 Dec 28, 2022
"MST++: Multi-stage Spectral-wise Transformer for Efficient Spectral Reconstruction" (CVPRW 2022) & (Winner of NTIRE 2022 Challenge on Spectral Reconstruction from RGB)

MST++: Multi-stage Spectral-wise Transformer for Efficient Spectral Reconstruction (CVPRW 2022) Yuanhao Cai, Jing Lin, Zudi Lin, Haoqian Wang, Yulun Z

Yuanhao Cai 274 Jan 5, 2023
Deep Learning: Architectures & Methods Project: Deep Learning for Audio Super-Resolution

Deep Learning: Architectures & Methods Project: Deep Learning for Audio Super-Resolution Figure: Example visualization of the method and baseline as a

Oliver Hahn 16 Dec 23, 2022
This is the official repository for evaluation on the NoW Benchmark Dataset. The goal of the NoW benchmark is to introduce a standard evaluation metric to measure the accuracy and robustness of 3D face reconstruction methods from a single image under variations in viewing angle, lighting, and common occlusions.

NoW Evaluation This is the official repository for evaluation on the NoW Benchmark Dataset. The goal of the NoW benchmark is to introduce a standard e

Soubhik Sanyal 71 Dec 30, 2022
aka "Bayesian Methods for Hackers": An introduction to Bayesian methods + probabilistic programming with a computation/understanding-first, mathematics-second point of view. All in pure Python ;)

Bayesian Methods for Hackers Using Python and PyMC The Bayesian method is the natural approach to inference, yet it is hidden from readers behind chap

Cameron Davidson-Pilon 25.1k Jan 2, 2023
A PyTorch-based open-source framework that provides methods for improving the weakly annotated data and allows researchers to efficiently develop and compare their own methods.

Knodle (Knowledge-supervised Deep Learning Framework) - a new framework for weak supervision with neural networks. It provides a modularization for se

null 93 Nov 6, 2022
Implementation of temporal pooling methods studied in [ICIP'20] A Comparative Evaluation Of Temporal Pooling Methods For Blind Video Quality Assessment

Implementation of temporal pooling methods studied in [ICIP'20] A Comparative Evaluation Of Temporal Pooling Methods For Blind Video Quality Assessment

Zhengzhong Tu 5 Sep 16, 2022
Road Crack Detection Using Deep Learning Methods

Road-Crack-Detection-Using-Deep-Learning-Methods This is my Diploma Thesis ¨Road Crack Detection Using Deep Learning Methods¨ under the supervision of

Aggelos Katsaliros 3 May 3, 2022
Awesome Deep Graph Clustering is a collection of SOTA, novel deep graph clustering methods

ADGC: Awesome Deep Graph Clustering ADGC is a collection of state-of-the-art (SOTA), novel deep graph clustering methods (papers, codes and datasets).

yueliu1999 297 Dec 27, 2022
Bayesian Image Reconstruction using Deep Generative Models

Bayesian Image Reconstruction using Deep Generative Models R. Marinescu, D. Moyer, P. Golland For technical inquiries, please create a Github issue. F

Razvan Valentin Marinescu 51 Nov 23, 2022