7 Repositories
Python genomes Libraries
A sage package for working with circular genomes represented by signed or unsigned permutations
Circular genome tools (cgt) A sage package for working with circular genomes represented by signed or unsigned permutations. It includes tools for con
1 Mar 10, 2022
Data Analytics on Genomes and Genetics
Data Analytics performed on On genomes and Genetics dataset to predict genetic disorder and disorder subclass. DONE by TEAM SIGMA!
1 Jan 12, 2022
CHERRY is a python library for predicting the interactions between viral and prokaryotic genomes
CHERRY is a python library for predicting the interactions between viral and prokaryotic genomes. CHERRY is based on a deep learning model, which consists of a graph convolutional encoder and a link prediction decoder.
12 Dec 15, 2022
Data and analysis code for an MS on SK VOC genomes phenotyping/neutralisation assays
Description Summary of phylogenomic methods and analyses used in "Immunogenicity of convalescent and vaccinated sera against clinical isolates of ance
1 Jan 6, 2022
This repository is for the preprint "A generative nonparametric Bayesian model for whole genomes"
BEAR Overview This repository contains code associated with the preprint A generative nonparametric Bayesian model for whole genomes (2021), which pro
10 Sep 18, 2022
Generate "Jupiter" plots for circular genomes
jupiter Generate "Jupiter" plots for circular genomes Description Python scripts to generate plots from ViennaRNA output. Written in "pidgin" python w
2 Nov 29, 2021
Selene is a Python library and command line interface for training deep neural networks from biological sequence data such as genomes.
Selene is a Python library and command line interface for training deep neural networks from biological sequence data such as genomes.
323 Jan 1, 2023