Python Pdb Resources

dssp-wsl Converting PDB (Protein Data Bank) file format to DSSP file format is required for generating datasets of peptides and their secondary struct

A Python script to download PDB files associated with a Portable Executable (PE)

Python_snippets_for_bioinformatics Python code snippets for extracting PDB codes from .fasta files If you have a single .fasta file for all protein se

Are you tired of using visualization software, or full blown suites just to separate protein chains / ligands ? Are you tired of organizing the mess o

Overview docs tests package Remote vanilla PDB (over TCP sockets) done right: no extras, proper handling around connection failures and CI. Based on p

NoPdb: Non-interactive Python Debugger Installation: pip install nopdb Docs: https://nopdb.readthedocs.io/ NoPdb is a programmatic (non-interactive) d

pdb++, a drop-in replacement for pdb What is it? This module is an extension of the pdb module of the standard library. It is meant to be fully compat

PuDB: a console-based visual debugger for Python Its goal is to provide all the niceties of modern GUI-based debuggers in a more lightweight and keybo

pdb++, a drop-in replacement for pdb What is it? This module is an extension of the pdb module of the standard library. It is meant to be fully compat

IPython pdb Use ipdb exports functions to access the IPython debugger, which features tab completion, syntax highlighting, better tracebacks, better i