Python Pubmed-mapper Resources

SciFive SciFive provided a Text-Text framework for biomedical language and natural language in NLP. Under the T5's framework and desrbibed in the pape

citation-url Parse URLs for DOIs, PubMed identifiers, PMC identifiers, arXiv identifiers, etc. This module has a single parse() function that takes in

Fetch PubMed Central for open-access papers as well as Sci-Hub

A set of Python codes for the generation of biomedical ontologies from the MeSH keywords of the PubMed scholarly publications

NLP PubMed Medical Research Paper Abstract (Randomized Controlled Trial) A natural language processing model for sequential sentence classification in

SQL MAPPER Basically what it does is: it executes some SQL thru a database connector you fed it, maps it to some model and gives to u. Also it can cre

SQLAlchemy The Python SQL Toolkit and Object Relational Mapper Introduction SQLAlchemy is the Python SQL toolkit and Object Relational Mapper that giv

esengine - The Elasticsearch Object Document Mapper esengine is an ODM (Object Document Mapper) it maps Python classes in to Elasticsearch index/doc_t

Object data mapper and advanced query manager for non relational databases. The data is owned by different, configurable back-end databases and it is

Flywheel Build: Documentation: http://flywheel.readthedocs.org/ Downloads: http://pypi.python.org/pypi/flywheel Source: https://github.com/stevearc/fl

Spider-Cut is a Network Mapper Framework (NMAP Framework) Installation | Usage | Creators | Donate Installation # Kali Linux | WSL

lupin is a Python JSON object mapper lupin is meant to help in serializing python objects to JSON and unserializing JSON data to python objects. Insta

Annotating "hypothetical" proteins with the PDB See config/ for configuration information. This workflow takes as input a set of protein sequences. It

Estoult Estoult is a Python toolkit for data mapping with an integrated query builder for SQL databases. It currently supports MySQL, PostgreSQL, and

pubmex.py is a script to get a fancy paper title based on given DOI or PMID (can be also combined with macOS Finder)

giotto-tda is a high-performance topological machine learning toolbox in Python built on top of scikit-learn and is distributed under the G

article-search-service doi, pubmed, arxiv.org的查询服务API接口，部署于vercel云函数 云函数 vercel，国内可能被qiang了。 DOI接口 POST https://article-search-service.vercel.app/api/

whm also known as wifi-heat-mapper is a Python library for benchmarking Wi-Fi networks and gather useful metrics that can be converted into meaningful easy-to-understand heatmaps.

Beanie - is an Asynchronous Python object-document mapper (ODM) for MongoDB, based on Motor and Pydantic.

Scikit-TDA is a home for Topological Data Analysis Python libraries intended for non-topologists. This project aims to provide a curated library of TD

pubmed-mapper: A Python Library that map PubMed XML to Python object 中文文档 1. Philosophy view UML Programmatically access PubMed article is a common ta

ODMantic Documentation: https://art049.github.io/odmantic/ Asynchronous ODM(Object Document Mapper) for MongoDB based on standard python type hints. I

Downloads Pony Object-Relational Mapper Pony is an advanced object-relational mapper. The most interesting feature of Pony is its ability to write que

MongoEngine Info: MongoEngine is an ORM-like layer on top of PyMongo. Repository: https://github.com/MongoEngine/mongoengine Author: Harry Marr (http:

IMPORTANT NOTE: I don't have time to maintain this library (as some of you might have noticed). The PubMed API is a little chaotic, without a clear do

MongoEngine Info: MongoEngine is an ORM-like layer on top of PyMongo. Repository: https://github.com/MongoEngine/mongoengine Author: Harry Marr (http:

Downloads Pony Object-Relational Mapper Pony is an advanced object-relational mapper. The most interesting feature of Pony is its ability to write que