ocroseg - This is a deep learning model for page layout analysis / segmentation.

Related tags

Computer Vision ocropus3-ocroseg
Overview

ocroseg

This is a deep learning model for page layout analysis / segmentation.

There are many different ways in which you can train and run it, but by default, it will simply return the text lines in a page image.

Segmentation

Segmentation is carried out using the ocroseg.Segmenter class. This needs a model that you can download or train yourself.

%%bash
model=lowskew-000000259-011440.pt
test -f $model || wget --quiet -nd https://storage.googleapis.com/tmb-models/$model
%pylab inline
rc("image", cmap="gray", interpolation="bicubic")
figsize(10, 10)
Populating the interactive namespace from numpy and matplotlib

The Segmenter object handles page segmentation using a DL model.

import ocroseg
seg = ocroseg.Segmenter("lowskew-000000259-011440.pt")
seg.model
Sequential(
  (0): Conv2d(1, 16, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1))
  (1): BatchNorm2d(16, eps=1e-05, momentum=0.1, affine=True)
  (2): ReLU()
  (3): MaxPool2d(kernel_size=(2, 2), stride=(2, 2), dilation=(1, 1), ceil_mode=False)
  (4): Conv2d(16, 32, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1))
  (5): BatchNorm2d(32, eps=1e-05, momentum=0.1, affine=True)
  (6): ReLU()
  (7): MaxPool2d(kernel_size=(2, 2), stride=(2, 2), dilation=(1, 1), ceil_mode=False)
  (8): Conv2d(32, 64, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1))
  (9): BatchNorm2d(64, eps=1e-05, momentum=0.1, affine=True)
  (10): ReLU()
  (11): LSTM2(
    (hlstm): RowwiseLSTM(
      (lstm): LSTM(64, 32, bidirectional=1)
    )
    (vlstm): RowwiseLSTM(
      (lstm): LSTM(64, 32, bidirectional=1)
    )
  )
  (12): Conv2d(64, 32, kernel_size=(1, 1), stride=(1, 1))
  (13): BatchNorm2d(32, eps=1e-05, momentum=0.1, affine=True)
  (14): ReLU()
  (15): LSTM2(
    (hlstm): RowwiseLSTM(
      (lstm): LSTM(32, 32, bidirectional=1)
    )
    (vlstm): RowwiseLSTM(
      (lstm): LSTM(64, 32, bidirectional=1)
    )
  )
  (16): Conv2d(64, 1, kernel_size=(1, 1), stride=(1, 1))
  (17): Sigmoid()
)

Let's segment a page with this.

image = 1.0 - imread("testdata/W1P0.png")[:2000]
print image.shape
imshow(image)
(2000, 2592)





<matplotlib.image.AxesImage at 0x7f6078b09690>

png

The extract_textlines method returns a list of text line images, bounding boxes, etc.

lines = seg.extract_textlines(image)
imshow(lines[0]['image'])
<matplotlib.image.AxesImage at 0x7f60781c05d0>

png

The segmenter accomplishes this by predicting seeds for each text line. With a bit of mathematical morphology, these seeds are then extended into a text line segmentation.

imshow(seg.lines)
<matplotlib.image.AxesImage at 0x7f60781a5510>

png

Training

The text line segmenter is trained using pairs of page images and line images stored in tar files.

%%bash
tar -ztvf testdata/framedlines.tgz | sed 6q
-rw-rw-r-- tmb/tmb      110404 2017-03-19 16:47 A001BIN.framed.png
-rw-rw-r-- tmb/tmb       10985 2017-03-16 16:15 A001BIN.lines.png
-rw-rw-r-- tmb/tmb       74671 2017-03-19 16:47 A002BIN.framed.png
-rw-rw-r-- tmb/tmb        8528 2017-03-16 16:15 A002BIN.lines.png
-rw-rw-r-- tmb/tmb      147716 2017-03-19 16:47 A003BIN.framed.png
-rw-rw-r-- tmb/tmb       12023 2017-03-16 16:15 A003BIN.lines.png


tar: write error

from dlinputs import tarrecords
sample = tarrecords.tariterator(open("testdata/framedlines.tgz")).next()
subplot(121); imshow(sample["framed.png"])
subplot(122); imshow(sample["lines.png"])
<matplotlib.image.AxesImage at 0x7f60e3d9bc10>

png

There are also some tools for data augmentation.

Generally, you can train these kinds of segmenters on any kind of image data, though they work best on properly binarized, rotation and skew-normalized page images. Note that by conventions, pages are white on black. You need to make sure that the model you load matches the kinds of pages you are trying to segment.

The actual models used are pretty complex and require LSTMs to function well, but for demonstration purposes, let's define and use a tiny layout analysis model. Look in bigmodel.py for a realistic model.

%%writefile tinymodel.py
def make_model():
    r = 3
    model = nn.Sequential(
        nn.Conv2d(1, 8, r, padding=r//2),
        nn.ReLU(),
        nn.MaxPool2d(2, 2),
        nn.Conv2d(8, 1, r, padding=r//2),
        nn.Sigmoid()
    )
    return model
Writing tinymodel.py

%%bash
./ocroseg-train -d testdata/framedlines.tgz --maxtrain 10 -M tinymodel.py --display 0
raw sample:
__key__ 'A001BIN'
__source__ 'testdata/framedlines.tgz'
lines.png float32 (3300, 2592)
png float32 (3300, 2592)

preprocessed sample:
__key__ <type 'list'> ['A002BIN']
__source__ <type 'list'> ['testdata/framedlines.tgz']
input float32 (1, 3300, 2592, 1)
mask float32 (1, 3300, 2592, 1)
output float32 (1, 3300, 2592, 1)

ntrain 0
model:
Sequential(
  (0): Conv2d(1, 8, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1))
  (1): ReLU()
  (2): MaxPool2d(kernel_size=(2, 2), stride=(2, 2), dilation=(1, 1), ceil_mode=False)
  (3): Conv2d(8, 1, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1))
  (4): Sigmoid()
)

0 0 ['A006BIN'] 0.24655306 ['A006BIN'] 0.31490618 0.55315816 lr 0.03
1 1 ['A007BIN'] 0.24404158 ['A007BIN'] 0.30752876 0.54983306 lr 0.03
2 2 ['A004BIN'] 0.24024434 ['A004BIN'] 0.31007746 0.54046077 lr 0.03
3 3 ['A008BIN'] 0.23756175 ['A008BIN'] 0.30573484 0.5392694 lr 0.03
4 4 ['A00LBIN'] 0.22300518 ['A00LBIN'] 0.28594157 0.52989864 lr 0.03
5 5 ['A00MBIN'] 0.22032338 ['A00MBIN'] 0.28086954 0.52204597 lr 0.03
6 6 ['A00DBIN'] 0.22794804 ['A00DBIN'] 0.27466372 0.512208 lr 0.03
7 7 ['A009BIN'] 0.22404794 ['A009BIN'] 0.27621177 0.51116604 lr 0.03
8 8 ['A001BIN'] 0.22008553 ['A001BIN'] 0.27836022 0.5008192 lr 0.03
9 9 ['A00IBIN'] 0.21842314 ['A00IBIN'] 0.26755702 0.4992323 lr 0.03
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Comments
  • cannot find module named dlmodels?

    cannot find module named dlmodels?

    seg = ocroseg.Segmenter("lowskew-000000259-011440.pt") Traceback (most recent call last): File "", line 1, in File "ocroseg/segmentation.py", line 300, in init self.model = torch.load(mname) File "/home/sunday/dingyk/tf2/local/lib/python2.7/site-packages/torch/serialization.py", line 358, in load return _load(f, map_location, pickle_module) File "/home/sunday/dingyk/tf2/local/lib/python2.7/site-packages/torch/serialization.py", line 542, in _load result = unpickler.load() File "/home/sunday/dingyk/tf2/local/lib/python2.7/site-packages/dltrainers/init.py", line 4, in from trainers import * File "/home/sunday/dingyk/tf2/local/lib/python2.7/site-packages/dltrainers/trainers.py", line 16, in import dlmodels as dlm ImportError: No module named dlmodels

    opened by happog 3
  • ocroseg-train [ unrecognized arguments: -M bigmodel.py ]

    ocroseg-train [ unrecognized arguments: -M bigmodel.py ]

    @tmbdev thank you for your hard work.

    When trying to train a new model:

    home@home-lnx:~/ocroseg$ ocroseg-train -d testdata/framedlines.tgz --maxtrain 10 -M bigmodel.py --display 0
usage: train a page segmenter [-h] [-l LR] [-b BATCHSIZE] [-o OUTPUT]
.
.
.
train a page segmenter: error: unrecognized arguments: -M bigmodel.py

    Some help would be appreciated @felarof99 @dbmdz @kba @leeoniya

    opened by ghost 1
  • CPU version of ocroseg [Cannot initialize CUDA without ATen_cuda library]

    CPU version of ocroseg [Cannot initialize CUDA without ATen_cuda library]

    @tmbdev when running ocroseg-train -d framedlines.tgz an error message appears, maybe because I don't have an nvidia graphics card, any help is appreciated:

    (python27) home@home-lnx:~/ocroseg/testdata$ ocroseg-train -d framedlines.tgz
raw sample:
__key__ 'A001BIN'
__source__ 'framedlines.tgz'
lines.png float32 (3300, 2592)
png float32 (3300, 2592)

preprocessed sample:
__key__ <type 'list'> ['A006BIN']
__source__ <type 'list'> ['framedlines.tgz']
input float32 (1, 3300, 2592, 1)
mask float32 (1, 3300, 2592, 1)
output float32 (1, 3300, 2592, 1)

Traceback (most recent call last):
  File "/home/home/anaconda2/envs/python27/bin/ocroseg-train", line 184, in <module>
    model.cuda()
  File "/home/home/anaconda2/envs/python27/lib/python2.7/site-packages/torch/nn/modules/module.py", line 258, in cuda
    return self._apply(lambda t: t.cuda(device))
  File "/home/home/anaconda2/envs/python27/lib/python2.7/site-packages/torch/nn/modules/module.py", line 185, in _apply
    module._apply(fn)
  File "/home/home/anaconda2/envs/python27/lib/python2.7/site-packages/torch/nn/modules/module.py", line 191, in _apply
    param.data = fn(param.data)
  File "/home/home/anaconda2/envs/python27/lib/python2.7/site-packages/torch/nn/modules/module.py", line 258, in <lambda>
    return self._apply(lambda t: t.cuda(device))
RuntimeError: Cannot initialize CUDA without ATen_cuda library. PyTorch splits its backend into two shared libraries: a CPU library and a CUDA library; this error has occurred because you are trying to use some CUDA functionality, but the CUDA library has not been loaded by the dynamic linker for some reason.  The CUDA library MUST be loaded, EVEN IF you don't directly use any symbols from the CUDA library! One common culprit is a lack of -Wl,--no-as-needed in your link arguments; many dynamic linkers will delete dynamic library dependencies if you don't depend on any of their symbols.  You can check if this has occurred by using ldd on your binary to see if there is a dependency on *_cuda.so library.
    opened by ghost 0
  • ocroseg-train stops

    ocroseg-train stops

    My machine specification is: 8 CPU / Quadro M4000 / 30 GB RAM / 100 GB When running ocroseg-train it gets stopped after a couple of minutes, whats wrong?

    (python2) paperspace@ps7w0ic92:~/ocropus3/ocroseg$ ocroseg-train -d ./testdata/framedlines.tgz --maxtrain 10 --display 0
raw sample:
__key__ 'A001BIN'
__source__ './testdata/framedlines.tgz'
lines.png float32 (3300, 2592)
png float32 (3300, 2592)

preprocessed sample:
__key__ <type 'list'> ['A003BIN']
__source__ <type 'list'> ['./testdata/framedlines.tgz']
input float32 (1, 3300, 2592, 1)
mask float32 (1, 3300, 2592, 1)
output float32 (1, 3300, 2592, 1)

ntrain 0
model:
Sequential(
  (0): Conv2d(1, 10, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1))
  (1): BatchNorm2d(10, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
  (2): ReLU()
  (3): MaxPool2d(kernel_size=2, stride=2, padding=0, dilation=1, ceil_mode=False)
  (4): Conv2d(10, 20, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1))
  (5): BatchNorm2d(20, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
  (6): ReLU()
  (7): MaxPool2d(kernel_size=2, stride=2, padding=0, dilation=1, ceil_mode=False)
  (8): Conv2d(20, 40, kernel_size=(3, 3), stride=(1, 1), padding=(1, 1))
  (9): BatchNorm2d(40, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
  (10): ReLU()
  (11): LSTM2(
    (hlstm): RowwiseLSTM(
      (lstm): LSTM(40, 20, bidirectional=1)
    )
    (vlstm): RowwiseLSTM(
      (lstm): LSTM(40, 20, bidirectional=1)
    )
  )
  (12): Conv2d(40, 20, kernel_size=(1, 1), stride=(1, 1))
  (13): BatchNorm2d(20, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
  (14): ReLU()
  (15): LSTM2(
    (hlstm): RowwiseLSTM(
      (lstm): LSTM(20, 20, bidirectional=1)
    )
    (vlstm): RowwiseLSTM(
      (lstm): LSTM(40, 20, bidirectional=1)
    )
  )
  (16): Conv2d(40, 1, kernel_size=(1, 1), stride=(1, 1))
  (17): Sigmoid()
)

/home/paperspace/anaconda3/envs/python2/lib/python2.7/site-packages/dltrainers/layers.py:421: UserWarning: volatile was removed (Variable.volatile is always False)
  volatile = not isinstance(img, Variable) or img.volatile
__key__ <type 'list'> ['A002BIN']
__source__ <type 'list'> ['./testdata/framedlines.tgz']
input float32 (1, 3300, 2592, 1)
mask float32 (1, 3300, 2592, 1)
output float32 (1, 3300, 2592, 1)

__key__ <type 'list'> ['A00FBIN']
__source__ <type 'list'> ['./testdata/framedlines.tgz']
input float32 (1, 3300, 2592, 1)
mask float32 (1, 3300, 2592, 1)
output float32 (1, 3300, 2592, 1)
.
.
.
.
__key__ <type 'list'> ['A00MBIN']
__source__ <type 'list'> ['./testdata/framedlines.tgz']
input float32 (1, 3300, 2592, 1)
mask float32 (1, 3300, 2592, 1)
output float32 (1, 3300, 2592, 1)

__key__ <type 'list'> ['A004BIN']
__source__ <type 'list'> ['./testdata/framedlines.tgz']
input float32 (1, 3300, 2592, 1)
mask float32 (1, 3300, 2592, 1)
output float32 (1, 3300, 2592, 1)

Killed
(python2) paperspace@ps7w0ic92:~/ocropus3/ocroseg$
    opened by ghost 1
Owner
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