Python Graph-Analysis-From-Scratch Resources

CCasGNN A new framework, collaborative cascade prediction based on graph neural networks (CCasGNN) to jointly utilize the structural characteristics,

Graph Neural Controlled Differential Equations for Traffic Forecasting Setup Python environment for STG-NCDE Install python environment $ conda env cr

Graph WaveNet for brain network analysis This is the implementation of the Graph WaveNet model used in our manuscript: S. Wein , A. Schüller, A. M. To

CRGNN Paper ： Improving the Training of Graph Neural Networks with Consistency Regularization Environments Implementing environment: GeForce RTX™ 3090

README Needs to be improved Prerequisites Need to have graphiz installed on the machine. Refer to https://graphviz.readthedocs.io/en/stable/manual.htm

Re-Scripts IA32-VMX-Helper (IDA-Script) IA32-MSR-Decoder (IDA-Script) IA32 VMX Helper It's an IDA script (Updated IA32 MSR Decoder) which helps you to

Federated learning on graph, especially on graph neural networks (GNNs), knowledge graph, and private GNN.

Papers about explainability of GNNs

subgraph-extractor Extracts data from the database for a graph-node and stores it in parquet files Installation For developing, it's recommended to us

deepface Deepface is a lightweight face recognition and facial attribute analysis (age, gender, emotion and race) framework for python. It is a hybrid

PymUSAS Python Multilingual Ucrel Semantic Analysis System, it currently is a rule based token level semantic tagger which can be added to any spaCy p

PyCellID (building...) Functions to analyze Cell-ID single-cell cytometry data using python language. Dependecies for this project. attrs(=21.1.0) fo

Neuroanalysis Modular and interactive tools for analysis of neurophysiology data, with emphasis on patch-clamp electrophysiology. Functions for runnin

Hierarchical Attention Networks for Document Classification This is an implementation of the paper Hierarchical Attention Networks for Document Classi

Intro Real-time object detection and classification. Paper: version 1, version 2. Read more about YOLO (in darknet) and download weight files here. In

ASCII Graph Plotter Plots the graph of a function with ASCII characters. See the change log here. Developed by InformaticFreak (c) 2021 How to use py

Scratch2py Scratch2py or S2py is a easy to use, versatile tool to communicate with the Scratch API Based of Scratch2py Installation Run this command i

Image-Exif A Python script for extracting exif metadata from images. How to use? Using this script you can extract exif data from image and save in .c

Vision Transformer(ViT) in Tensorflow2 Tensorflow2 implementation of the Vision Transformer(ViT). This repository is for An image is worth 16x16 words

Graph Posterior Network This is the official code repository to the paper Graph Posterior Network: Bayesian Predictive Uncertainty for Node Classifica

Convert ONNX model graph to Keras model format.

CTO (Call Tree Overviewer) CTO (Call Tree Overviewer) is an IDA plugin for creating a simple and efficiant function call tree graph. It can also summa

DeepIntegralCompton Deep Learning applied to Integral data analysis Module installation Move to the root directory of the project and execute : pip in

My Analysis of the VC4 Assembly Code from the RPI4

Scripts for BGC analysis in large MAGs and results of their application to soil metagenomes within Chernevaya Taiga RSF-funded project

CAPGNN Source code and dataset of the paper "Contrastive Adaptive Propagation Graph Neural Networks forEfficient Graph Learning" Paper URL: https://ar

HTSeq DEVS: https://github.com/htseq/htseq DOCS: https://htseq.readthedocs.io A Python library to facilitate programmatic analysis of data from high-t

TC-GNN (Running Sparse GNN on Dense Tensor Core on Ampere GPU) Cite this project and paper. @inproceedings{TC-GNN, title={TC-GNN: Accelerating Spars

Open-CyKG: An Open Cyber Threat Intelligence Knowledge Graph Model Description Open-CyKG is a framework that is constructed using an attenti

sklearn-evaluation Machine learning model evaluation made easy: plots, tables, HTML reports, experiment tracking, and Jupyter notebook analysis. Suppo

Decoupled Spatial-Temporal Graph Neural Networks Code for our paper: Decoupled Dynamic Spatial-Temporal Graph Neural Network for Traffic Forecasting.

Pandas TA - A Technical Analysis Library in Python 3 Pandas Technical Analysis (Pandas TA) is an easy to use library that leverages the Pandas package

Feature-Engineering The functions we created are included in a script. The necessary parts for pre-processing were taken. Analysis complete. Business

GGanalysisLite计算包 这个版本的计算包追求计算速度，而GGanalysis包有着更多计算功能。 GGanalysisLite包通过卷积计算分布列，通过FFT和快速幂加速卷积计算。 测试玩家得到的排名值rank的数学意义是：与抽了同样数量五星的其他玩家相比，测试玩家花费的抽数大于等于比例

slientruss3d : Python for stable truss analysis tool Desciption slientruss3d is a python package which can solve the resistances, internal forces and

Permutation Invariant Graph Generation via Score-Based Generative Modeling This repo contains the official implementation for the paper Permutation In

Molecular Mechanics-Driven Graph Neural Network with Multiplex Graph for Molecular Structures Code for the Multiplex Molecular Graph Neural Network (M

SCAPT-ABSA Code for EMNLP2021 paper: "Learning Implicit Sentiment in Aspect-based Sentiment Analysis with Supervised Contrastive Pre-Training" Overvie

Efficient Graph Similarity Computation - (EGSC) This repo contains the source code and dataset for our paper: Slow Learning and Fast Inference: Effici

wcc_analysis Lichess page documentation: https://lichess.org/page/world-championships Each WCC has a study, studies are fetched using: https://lichess

Reminder ST-GCN has transferred to MMSkeleton, and keep on developing as an flexible open source toolbox for skeleton-based human understanding. You a

Latent Semantic Analysis Pipeline for training LSA models using Scikit-Learn. Usage Instead of writing custom code for latent semantic analysis, you j

slam-playground Educational 2D SLAM implementation based on ICP and Pose Graph How to use: Use keyboard arrow keys to navigate robot. Press 'r' to vie

To run a generation experiment (either conceptnet or atomic), follow these instructions: First Steps First clone, the repo: git clone https://github.c

K-BERT Sorce code and datasets for "K-BERT: Enabling Language Representation with Knowledge Graph", which is implemented based on the UER framework. R

DOC | Quick Start | 中文 Breaking News !! 🔥 🔥 🔥 OGB-LSC KDD CUP 2021 winners announced!! (2021.06.17) Super excited to announce our PGL team won TWO

This repository is an official PyTorch(Geometric) implementation of G^2GNN in "Imbalanced Graph Classification via Graph-of-Graph Neural Networks". Th

Efficient Graph Similarity Computation - (EGSC) This repo contains the source code and dataset for our paper: Slow Learning and Fast Inference: Effici

Knowledge-enhanced Contrastive Learning (KCL) Molecular Contrastive Learning with Chemical Element Knowledge Graph [ AAAI 2022 ]. We construct a Chemi

Course: Introduction to Applied Algorithms with Python (in French) This is the source code of the website for the Applied Algorithms with Python cours

GSAN Introduction Code for paper GSAN: Graph Self-Attention Network for Learning Spatial-Temporal Interaction Representation in Autonomous Driving, wh

ts2vg: Time series to visibility graphs The Python ts2vg package provides high-performance algorithm implementations to build visibility graphs from t

PLUR (Programming-Language Understanding and Repair) is a collection of source code datasets suitable for graph-based machine learning. We provide scripts for downloading, processing, and loading the datasets. This is done by offering a unified API and data structures for all datasets.

SEAS Student Enrollment Analysis System Steps to start working: create a user name "seas", host name: local, password: seas, mark all checkbox - go C

BERT Attention Analysis This repository contains code for What Does BERT Look At? An Analysis of BERT's Attention. It includes code for getting attent

Norm-based Analysis of Transformer Implementations for 2 papers introducing to analyze Transformers using vector norms: Kobayashi+'20 Attention is Not

#Sentic GCN Introduction This repository was used in our paper: Aspect-Based Sentiment Analysis via Affective Knowledge Enhanced Graph Convolutional N

clustimage The aim of clustimage is to detect natural groups or clusters of images. Image recognition is a computer vision task for identifying and ve

multilingual-mrc-isdg Code for the AAAI 2022 paper "Zero-Shot Cross-Lingual Machine Reading Comprehension via Inter-Sentence Dependency Graph". This r

Group and Section Group 36 Section 001 name and UNI Name UNI Ningyu Jia nj2459 Mengyin Ma mm5937 code explanation Parking.py (1) Calculate the rate of

Self-Supervised Graph Representation Learning via Topology Transformations This repository is the official PyTorch implementation of the following pap

Threagile is an open-source toolkit for agile threat modeling:

decentralized-gnn A package for implementing and simulating decentralized Graph Neural Network algorithms for classification of peer-to-peer nodes. De

HAABSAStar Code for "Adversarial Training for a Hybrid Approach to Aspect-Based Sentiment Analysis". This project builds on the code from https://gith

Decoding the Protein-ligand Interactions Using Parallel Graph Neural Networks Requirements python 0.10+ rdkit 2020.03.3.0 biopython 1.78 openbabel 2.4

Adversarial Attacks on Graph Classification via Bayesian Optimisation @ NeurIPS 2021 This repository contains the official implementation of GRABNEL,

Discovering Dynamic Salient Regions with Spatio-Temporal Graph Neural Networks This is the official code for DyReg model inroduced in Discovering Dyna

BEAR Overview This repository contains code associated with the preprint A generative nonparametric Bayesian model for whole genomes (2021), which pro

Graph Neural Topic Model (GNTM) This is the pytorch implementation of the paper "Topic Modeling Revisited: A Document Graph-based Neural Network Persp

PyTCI A toolbox that estimates the integration window of a sensory response using the "Temporal Context Invariance" paradigm (TCI). The TCI method Int

Graph Augmentation Graph augmentation/self-supervision/etc. Algorithms gcn gcn+virtual node gin gin+virtual node PNA GraphTrans Augmentation methods N

Deep Markov Factor Analysis (DMFA) Codes and experiments for deep Markov factor analysis (DMFA) model accepted for publication at NeurIPS2021: A. Farn

ReFine: Multi-Grained Explainability for GNNs We are trying hard to update the code, but it may take a while to complete due to our tight schedule rec

EIGNN: Efficient Infinite-Depth Graph Neural Networks The official implementation of EIGNN: Efficient Infinite-Depth Graph Neural Networks (NeurIPS 20

Directed Graph Contrastive Learning Paper | Poster | Supplementary The PyTorch implementation of Directed Graph Contrastive Learning (DiGCL). In this

Code for "Solving Graph-based Public Good Games with Tree Search and Imitation Learning" This is the code for the paper Solving Graph-based Public Goo

Hyperbolic Procrustes Analysis Using Riemannian Geometry The code in this repository creates the figures presented in this article: Please notice that

PyDGN Wiki Description This is a Python library to easily experiment with Deep Graph Networks (DGNs). It provides automatic management of data splitti

MatrixProfile MatrixProfile is a Python 3 library, brought to you by the Matrix Profile Foundation, for mining time series data. The Matrix Profile is

CRISP: Critical Path Analysis of Microservice Traces This repo contains code to compute and present critical path summary from Jaeger microservice tra

VaccineEfficiency 💉 An analysis of the efficiency of the COVID-19 vaccine 3 Methods 1️⃣ Compare country's vaccination data to number of day- to-day c

COIN Dataset COIN is the currently largest dataset for comprehensive instruction video analysis. It contains 11,827 videos of 180 different tasks (i.e

ESP32-IoT-button-graph-test ESP32 recording button presses, and serving webpage via webSockets in order to graph the responses. The objective was to t

LAMA: LAnguage Model Analysis LAMA is a probe for analyzing the factual and commonsense knowledge contained in pretrained language models. The dataset

GraphRNN: Generating Realistic Graphs with Deep Auto-regressive Model This repository is the official PyTorch implementation of GraphRNN, a graph gene

Welcome to the CSIRO Face Analysis SDK. Documentation for the SDK can be found in doc/documentation.html. All code in this SDK is provided according t

PENecro This project is based on "Enabling dynamic analysis of Legacy Embedded Systems in full emulated environment", published on hardwear.io USA 202

Ping Pong Project The objective of this project was to determine the moment of impact of the ball with the ground. To do this, we used different model

KDD CUP 2020: AutoGraph Team: aister Members: Jianqiang Huang, Xingyuan Tang, Mingjian Chen, Jin Xu, Bohang Zheng, Yi Qi, Ke Hu, Jun Lei Team Introduc

Repository for the paper "Graph Auto-Encoders for Financial Clustering" Requirements Python 3.6 torch torch_geometric Instructions This is a simple c

Enhancing Aspect-Based Sentiment Analysis with Supervised Contrastive Learning. This repo contains the PyTorch code and implementation for the paper E

🔍 E-Commerce recommender demo 🔍 This is a simple stream setup that uses Memgraph to ingest real-time data from a simulated online store. Data is str

Enhancing Aspect-Based Sentiment Analysis with Supervised Contrastive Learning. Enhancing Aspect-Based Sentiment Analysis with Supervised Contrastive

Douglas-Quaid Project Open source software for image correlation, distance and analysis. Strongly related to : Carl-Hauser Problem statement (@CIRCL)

Steps to run = Download the cora dataset from this link : https://linqs.soe.ucsc.edu/data unzip the files in the folder input/cora cd code python eda

Python asymptotic Partial Directed Coherence and Directed Coherence estimation package for brain connectivity analysis. Free software: MIT license Doc

MMDA - multimodal document analysis

awesome-causality-algorithms An index of algorithms for learning causality with data. Please cite our survey paper if this index is helpful. @article{

PyConverse Let me try first Installation pip install pyconverse Usage Please try this notebook that demos the core functionalities: basic usage noteb

OANet implementation Pytorch implementation of OANet for ICCV'19 paper "Learning Two-View Correspondences and Geometry Using Order-Aware Network", by