Python Hybrid-imaging Resources

ngEHTexplorer An interactive tool with which to explore the possible imaging performance of candidate ngEHT architectures. Welcome! ngEHTexplorer is a

MultiMix This repository contains the implementation of MultiMix. Our publications for this project are listed below: "MultiMix: Sparingly Supervised,

GenHybridMLLmodel Generalized hybrid model for mode-locked laser diodes with an extended passive cavity This hybrid simulation strategy combines a tra

OSS-Net: Memory Efficient High Resolution Semantic Segmentation of 3D Medical Data Christoph Reich, Tim Prangemeier, Özdemir Cetin & Heinz Koeppl | Pr

OSS-Net: Memory Efficient High Resolution Semantic Segmentation of 3D Medical Data Christoph Reich, Tim Prangemeier, Özdemir Cetin & Heinz Koeppl | Pr

Documentation for the NASA IDS change analysis Poley 10/21/2021 Required python packages: whitebox numpy rasterio rasterio.mask os glob math itertools

torchquantum A PyTorch-centric hybrid classical-quantum dynamic neural networks framework. News Add a simple example script using quantum gates to do

collie Collie is a library for preparing, training, and evaluating implicit deep learning hybrid recommender systems, named after the Border Collie do

Life is Fantasy Epic (LIFE) A fantasy life simulator and role-playing game hybrid distributed as CLI, written in Python 3. This repository will be pro

starfish: scalable pipelines for image-based transcriptomics starfish is a Python library for processing images of image-based spatial transcriptomics

HF2-VAD Offcial implementation of "A Hybrid Video Anomaly Detection Framework via Memory-Augmented Flow Reconstruction and Flow-Guided Frame Predictio

img2texture Command line utility for converting images to seamless tiles. The resulting tiles can be used as textures in games, compositing and 3D mod

An adaptive hierarchical energy management strategy This project contains the source code of an adaptive hierarchical EMS combining heuristic equivale

MONAI Deploy App SDK offers a framework and associated tools to design, develop and verify AI-driven applications in the healthcare imaging domain.

For academic use only. Stereo Hybrid Event-Frame (SHEF) Cameras for 3D Perception Ziwei Wang, Liyuan Pan, Yonhon Ng, Zheyu Zhuang and Robert Mahony Th

Rescoring Sequence-to-Sequence Models for Text Line Recognition with CTC-Prefixes Setup virtualenv -p python3 venv source venv/bin/activate pip instal

Useful materials and tutorials for 110-1 NTU DBME5028 (Application of Deep Learning in Medical Imaging)

QSYM: A Practical Concolic Execution Engine Tailored for Hybrid Fuzzing Environment Tested on Ubuntu 14.04 64bit and 16.04 64bit Installation # disabl

HyDiff: Hybrid Differential Software Analysis This repository provides the tool and the evaluation subjects for the paper HyDiff: Hybrid Differential

A 3D multi-modal medical image segmentation library in PyTorch We strongly believe in open and reproducible deep learning research. Our goal is to imp

Small Lesion Segmentation in Brain MRIs with Subpixel Embedding PyTorch implementation of Small Lesion Segmentation in Brain MRIs with Subpixel Embedd

AlignShift NEW: Code for our new MICCAI'21 paper "Asymmetric 3D Context Fusion for Universal Lesion Detection" will also be pushed to this repository

Scientific Computational Imaging COde (SCICO) SCICO is a Python package for solving the inverse problems that arise in scientific imaging applications

Dense Deep Unfolding Network with 3D-CNN Prior for Snapshot Compressive Imaging, ICCV2021 [PyTorch Code]

Pillow Python Imaging Library (Fork) Pillow is the friendly PIL fork by Alex Clark and Contributors. PIL is the Python Imaging Library by Fredrik Lund

bartpy Python bindings for BART. Overview This repo contains code to generate an updated Python wrapper for the Berkeley Advance Reconstruction Toolbo

Mask-RCNN on Mycobacterium tuberculosis This is an example of object detection on Mycobacterium Tuberculosis using Mask RCNN. Implement of Mask R-CNN

Mask-RCNN on Mycobacterium tuberculosis This is an example of object detection on Mycobacterium Tuberculosis using Mask RCNN. Implement of Mask R-CNN

WobblyStitcher Introduction A scalable implementation of WobblyStitcher Dependencies $ python -m pip install numpy scikit-image Visualization ImageJ

Medical image preprocessing and augmentation toolkit for deep learning. Part of the PyTorch Ecosystem.

ml4h is a toolkit for machine learning on clinical data of all kinds including genetics, labs, imaging, clinical notes, and more

Deep Optics for Single-shot High-dynamic-range Imaging Code associated with the paper "Deep Optics for Single-shot High-dynamic-range Imaging" CVPR, 2

HPNet This repository contains the PyTorch implementation of paper: HPNet: Deep Primitive Segmentation Using Hybrid Representations. Installation The

NCRF Prerequisites Data Whole slide images Annotations Patch images Model Training Testing Tissue mask Probability map Tumor localization FROC evaluat

Deep Neural Networks Improve Radiologists' Performance in Breast Cancer Screening Introduction This is an implementation of the model used for breast

UNet for segmenting salt deposits from seismic images with PyTorch. General We, tugstugi and xuyuan, have participated in the Kaggle competition TGS S

The Medical Detection Toolkit contains 2D + 3D implementations of prevalent object detectors such as Mask R-CNN, Retina Net, Retina U-Net, as well as a training and inference framework focused on dealing with medical images.

What is nnDetection? Simultaneous localisation and categorization of objects in medical images, also referred to as medical object detection, is of hi

DeepCDR Cancer Drug Response Prediction via a Hybrid Graph Convolutional Network This work has been accepted to ECCB2020 and was also published in the

Automatic Weapon Detection Deployment of a hybrid model for automatic weapon detection/ anomaly detection for surveillance applications. Loved the pro

Hybrid solving process for combinatorial optimization problems Combinatorial optimization has found applications in numerous fields, from aerospace to

R²SQL The PyTorch implementation of paper Dynamic Hybrid Relation Network for Cross-Domain Context-Dependent Semantic Parsing. (AAAI 2021) Requirement

The PyTorch-Kaldi Speech Recognition Toolkit PyTorch-Kaldi is an open-source repository for developing state-of-the-art DNN/HMM speech recognition sys

collie_recs Collie is a library for preparing, training, and evaluating implicit deep learning hybrid recommender systems, named after the Border Coll

Graph Optimizer This repo contains the official implementation of our CVPR 2021 paper - Hybrid Rotation Averaging: A Fast and Robust Rotation Averagin

Welcome to MedicalTorch MedicalTorch is an open-source framework for PyTorch, implementing an extensive set of loaders, pre-processors and datasets fo

Implementation for Iso-Points (CVPR 2021) Official code for paper Iso-Points: Optimizing Neural Implicit Surfaces with Hybrid Representations paper |

CheXbert: Combining Automatic Labelers and Expert Annotations for Accurate Radiology Report Labeling Using BERT CheXbert is an accurate, automated dee

Domain Generalization for Medical Imaging Classification with Linear Dependency Regularization The code release of paper 'Domain Generalization for Me

FuSta: Hybrid Neural Fusion for Full-frame Video Stabilization Project Page | Video | Paper | Google Colab Setup Setup environment for [Yu and Ramamoo

BossNAS This repository contains PyTorch evaluation code, retraining code and pretrained models of our paper: BossNAS: Exploring Hybrid CNN-transforme

InVesalius InVesalius generates 3D medical imaging reconstructions based on a sequence of 2D DICOM files acquired with CT or MRI equipments. InVesaliu

Medical-Transformer Pytorch Code for the paper "Medical Transformer: Gated Axial-Attention for Medical Image Segmentation" About this repo: This repo

Meshroom is a free, open-source 3D Reconstruction Software based on the AliceVision Photogrammetric Computer Vision framework. Learn more details abou

R²SQL The PyTorch implementation of paper Dynamic Hybrid Relation Network for Cross-Domain Context-Dependent Semantic Parsing. (AAAI 2021) Requirement

LightFM Build status Linux OSX (OpenMP disabled) Windows (OpenMP disabled) LightFM is a Python implementation of a number of popular recommendation al

Documentation: https://raamana.github.io/neuropredict/ News As of v0.6, neuropredict now supports regression applications i.e. predicting continuous t

nilearn Nilearn enables approachable and versatile analyses of brain volumes. It provides statistical and machine-learning tools, with instructive doc

Pillow Python Imaging Library (Fork) Pillow is the friendly PIL fork by Alex Clark and Contributors. PIL is the Python Imaging Library by Fredrik Lund