A small demonstration of using WebDataset with ImageNet and PyTorch Lightning

Related tags

Deep Learning webdataset-lightning
Overview

A small demonstration of using WebDataset with ImageNet and PyTorch Lightning

This is a small repo illustrating how to use WebDataset on ImageNet. using the PyTorch Lightning framework.

First, create the virtualenv:

$ ./run venv  # make virtualenv

Next, you need to shard the ImageNet data:

$ ln -s /some/imagenet/directory data
$ mkdir shards
$ ./run makeshards  # create shards

Run the training script:

$ ./run train -b 128 --gpus 2 # run the training jobs using PyTorch lightning

Of course, for local data, there is no need to go through this trouble. However, you can now easily train remotely, for example by putting the data on a webserver:

$ rsync -av shards webserver:/var/www/html/shards
$ ./run train --gpus 2 --bucket http://webserver/shards

The AIStore server is a high performance S3-compatible storage server (and web server) that works very with WebDataset.

Comments
  • When using ddp with lighting it stuck while training

    When using ddp with lighting it stuck while training

    I followed the sample this repo provided. set NCCL_IB_DISABLE=1 and NCCL_SOCKET_IFNAME=eth0, it will stuck while start training.

    When I switch normal dataloader, it works on ddp accelerator. It is clearly because of webdataset not support distributed sampling. Would you guys fix it?

    initializing ddp: GLOBAL_RANK: 1, MEMBER: 2/2
initializing ddp: GLOBAL_RANK: 0, MEMBER: 1/2
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44670:44670 [0] NCCL INFO NCCL_IB_DISABLE set by environment to 1.
NCCL version 2.7.8+cuda11.0
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44748:44748 [1] NCCL INFO NCCL_IB_DISABLE set by environment to 1.
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44670:44670 [0] NCCL INFO AllReduce: opCount 0 sendbuff 0x7f4fec200000 recvbuff 0x7f4fec200000 count 1 datatype 1 op 0 root 0 comm 0x7f4fe0000e00 [nranks=2] stream 0x56123d2c4000
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44748:44748 [1] NCCL INFO AllReduce: opCount 0 sendbuff 0x7fecd2200000 recvbuff 0x7fecd2200000 count 1 datatype 1 op 0 root 0 comm 0x7feca4000e00 [nranks=2] stream 0x55f74bed1ee0
----------------------------------------------------------------------------------------------------
distributed_backend=nccl
All DDP processes registered. Starting ddp with 2 processes
----------------------------------------------------------------------------------------------------

6d4c7ddf-e133-482e-ac7d-237da037cd0f:44748:44748 [1] NCCL INFO AllReduce: opCount 1 sendbuff 0x7fecd2200000 recvbuff 0x7fecd2200000 count 1 datatype 1 op 0 root 0 comm 0x7feca4000e00 [nranks=2] stream 0x55f74bed1ee0
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44670:44670 [0] NCCL INFO AllReduce: opCount 1 sendbuff 0x7f4fec200000 recvbuff 0x7f4fec200000 count 1 datatype 1 op 0 root 0 comm 0x7f4fe0000e00 [nranks=2] stream 0x56123d2c4000
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44748:44748 [1] NCCL INFO AllReduce: opCount 2 sendbuff 0x7fecd2200000 recvbuff 0x7fecd2200000 count 1 datatype 1 op 0 root 0 comm 0x7feca4000e00 [nranks=2] stream 0x55f74bed1ee0
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44670:44670 [0] NCCL INFO AllReduce: opCount 2 sendbuff 0x7f4fec200000 recvbuff 0x7f4fec200000 count 1 datatype 1 op 0 root 0 comm 0x7f4fe0000e00 [nranks=2] stream 0x56123d2c4000
LOCAL_RANK: 0 - CUDA_VISIBLE_DEVICES: [0,1,2,3,4,5,6,7]
LOCAL_RANK: 1 - CUDA_VISIBLE_DEVICES: [0,1,2,3,4,5,6,7]
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44748:44748 [1] NCCL INFO AllReduce: opCount 3 sendbuff 0x7fecd2200000 recvbuff 0x7fecd2200000 count 1 datatype 1 op 0 root 0 comm 0x7feca4000e00 [nranks=2] stream 0x55f74bed1ee0
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44670:44670 [0] NCCL INFO AllReduce: opCount 3 sendbuff 0x7f4fec200000 recvbuff 0x7f4fec200000 count 1 datatype 1 op 0 root 0 comm 0x7f4fe0000e00 [nranks=2] stream 0x56123d2c4000
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44748:44748 [4] NCCL INFO AllGather: opCount 0 sendbuff 0x7fec33600000 recvbuff 0x7fec33600600 count 8 datatype 0 op 0 root 0 comm 0x7fec2c000e00 [nranks=2] stream 0x55f7c95060a0
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44670:44670 [3] NCCL INFO AllGather: opCount 0 sendbuff 0x7f4f73600000 recvbuff 0x7f4f73600600 count 8 datatype 0 op 0 root 0 comm 0x7f4f64000e00 [nranks=2] stream 0x56129cdd4b80
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44748:44748 [4] NCCL INFO Broadcast: opCount 1 sendbuff 0x7fec33600000 recvbuff 0x7fec33600000 count 8 datatype 0 op 0 root 0 comm 0x7fec2c000e00 [nranks=2] stream 0x55f7c95060a0
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44670:44670 [3] NCCL INFO Broadcast: opCount 1 sendbuff 0x7f4f73600000 recvbuff 0x7f4f73600000 count 8 datatype 0 op 0 root 0 comm 0x7f4f64000e00 [nranks=2] stream 0x56129cdd4b80
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44670:44670 [3] NCCL INFO Broadcast: opCount 2 sendbuff 0x7f4f73600200 recvbuff 0x7f4f73600200 count 31 datatype 0 op 0 root 0 comm 0x7f4f64000e00 [nranks=2] stream 0x56129cdd4b80
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44748:44748 [4] NCCL INFO Broadcast: opCount 2 sendbuff 0x7fec33600200 recvbuff 0x7fec33600200 count 31 datatype 0 op 0 root 0 comm 0x7fec2c000e00 [nranks=2] stream 0x55f7c95060a0
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44670:44670 [3] NCCL INFO Broadcast: opCount 3 sendbuff 0x7f4f3a000000 recvbuff 0x7f4f3a000000 count 39082372 datatype 0 op 0 root 0 comm 0x7f4f64000e00 [nranks=2] stream 0x56129cdd4b80
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44748:44748 [4] NCCL INFO Broadcast: opCount 3 sendbuff 0x7fec00000000 recvbuff 0x7fec00000000 count 39082372 datatype 0 op 0 root 0 comm 0x7fec2c000e00 [nranks=2] stream 0x55f7c95060a0
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44670:44670 [3] NCCL INFO Broadcast: opCount 4 sendbuff 0x7f4f73746000 recvbuff 0x7f4f73746000 count 2416 datatype 0 op 0 root 0 comm 0x7f4f64000e00 [nranks=2] stream 0x56129cdd4b80
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44748:44748 [4] NCCL INFO Broadcast: opCount 4 sendbuff 0x7fec33746000 recvbuff 0x7fec33746000 count 2416 datatype 0 op 0 root 0 comm 0x7fec2c000e00 [nranks=2] stream 0x55f7c95060a0
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44748:44748 [4] NCCL INFO Broadcast: opCount 5 sendbuff 0x7fec33746200 recvbuff 0x7fec33746200 count 8 datatype 0 op 0 root 0 comm 0x7fec2c000e00 [nranks=2] stream 0x55f7c95060a0
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44670:44670 [3] NCCL INFO Broadcast: opCount 5 sendbuff 0x7f4f73746200 recvbuff 0x7f4f73746200 count 8 datatype 0 op 0 root 0 comm 0x7f4f64000e00 [nranks=2] stream 0x56129cdd4b80
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44670:44670 [3] NCCL INFO Broadcast: opCount 6 sendbuff 0x7f4f73746400 recvbuff 0x7f4f73746400 count 68 datatype 0 op 0 root 0 comm 0x7f4f64000e00 [nranks=2] stream 0x56129cdd4b80
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44748:44748 [4] NCCL INFO Broadcast: opCount 6 sendbuff 0x7fec33746400 recvbuff 0x7fec33746400 count 68 datatype 0 op 0 root 0 comm 0x7fec2c000e00 [nranks=2] stream 0x55f7c95060a0
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44670:44670 [0] NCCL INFO AllReduce: opCount 0 sendbuff 0x7f4fec200000 recvbuff 0x7f4fec200000 count 1 datatype 1 op 0 root 0 comm 0x7f4f34000e00 [nranks=4] stream 0x56129c6a94c0
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44670:44670 [3] NCCL INFO AllReduce: opCount 0 sendbuff 0x7f4f73746200 recvbuff 0x7f4f73746200 count 1 datatype 1 op 0 root 0 comm 0x7f4f2c000e00 [nranks=4] stream 0x5612b830be50
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44748:44748 [1] NCCL INFO AllReduce: opCount 0 sendbuff 0x7fecd2200000 recvbuff 0x7fecd2200000 count 1 datatype 1 op 0 root 0 comm 0x7fec2c12a000 [nranks=4] stream 0x55f7ac1717f0
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44748:44748 [4] NCCL INFO AllReduce: opCount 0 sendbuff 0x7fec33746200 recvbuff 0x7fec33746200 count 1 datatype 1 op 0 root 0 comm 0x7febf8000e00 [nranks=4] stream 0x55f7c9489e90
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44670:44670 [0] NCCL INFO AllReduce: opCount 1 sendbuff 0x7f4ea9600000 recvbuff 0x7f4ea9600000 count 1 datatype 1 op 0 root 0 comm 0x7f4f34000e00 [nranks=4] stream 0x56129c6a94c0
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44670:44670 [3] NCCL INFO AllReduce: opCount 1 sendbuff 0x7f4f73746200 recvbuff 0x7f4f73746200 count 1 datatype 1 op 0 root 0 comm 0x7f4f2c000e00 [nranks=4] stream 0x5612b830be50
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44748:44748 [1] NCCL INFO AllReduce: opCount 1 sendbuff 0x7feb75000000 recvbuff 0x7feb75000000 count 1 datatype 1 op 0 root 0 comm 0x7fec2c12a000 [nranks=4] stream 0x55f7ac1717f0
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44748:44748 [4] NCCL INFO AllReduce: opCount 1 sendbuff 0x7fec33746200 recvbuff 0x7fec33746200 count 1 datatype 1 op 0 root 0 comm 0x7febf8000e00 [nranks=4] stream 0x55f7c9489e90
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44670:44670 [3] NCCL INFO Broadcast: opCount 7 sendbuff 0x7f4f73746200 recvbuff 0x7f4f73746200 count 8 datatype 0 op 0 root 0 comm 0x7f4f64000e00 [nranks=2] stream 0x56129cdd4b80
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44670:44670 [3] NCCL INFO Broadcast: opCount 8 sendbuff 0x7f4f73746400 recvbuff 0x7f4f73746400 count 80 datatype 0 op 0 root 0 comm 0x7f4f64000e00 [nranks=2] stream 0x56129cdd4b80
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44748:44748 [4] NCCL INFO Broadcast: opCount 7 sendbuff 0x7fec33746200 recvbuff 0x7fec33746200 count 8 datatype 0 op 0 root 0 comm 0x7fec2c000e00 [nranks=2] stream 0x55f7c95060a0
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44748:44748 [4] NCCL INFO Broadcast: opCount 8 sendbuff 0x7fec33746400 recvbuff 0x7fec33746400 count 80 datatype 0 op 0 root 0 comm 0x7fec2c000e00 [nranks=2] stream 0x55f7c95060a0
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44748:44748 [1] NCCL INFO AllReduce: opCount 2 sendbuff 0x7feb75000000 recvbuff 0x7feb75000000 count 1 datatype 1 op 0 root 0 comm 0x7fec2c12a000 [nranks=4] stream 0x55f7ac1717f0
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44748:44748 [4] NCCL INFO AllReduce: opCount 2 sendbuff 0x7fec33746200 recvbuff 0x7fec33746200 count 1 datatype 1 op 0 root 0 comm 0x7febf8000e00 [nranks=4] stream 0x55f7c9489e90

   | Name                         | Type       | Params
-------------------------------------------------------------
0  | atom_encoder                 | Linear     | 22.0 K
1  | edge_encoder                 | Linear     | 64    
2  | spatial_pos_encoder          | Embedding  | 16.4 K
3  | degree_encoder               | Embedding  | 262 K 
4  | input_dropout                | Dropout    | 0     
5  | layers                       | ModuleList | 9.5 M 
6  | final_ln                     | LayerNorm  | 1.0 K 
7  | out_proj                     | Linear     | 513   
8  | graph_token                  | Embedding  | 512   
9  | graph_token_virtual_distance | Embedding  | 32    
10 | loss_fn                      | MSELoss    | 0     
-------------------------------------------------------------
9.8 M     Trainable params
0         Non-trainable params
9.8 M     Total params
39.082    Total estimated model params size (MB)
Validation sanity check: 0it [00:00, ?it/s]6d4c7ddf-e133-482e-ac7d-237da037cd0f:44670:44670 [0] NCCL INFO AllReduce: opCount 2 sendbuff 0x7f4ea9600000 recvbuff 0x7f4ea9600000 count 1 datatype 1 op 0 root 0 comm 0x7f4f34000e00 [nranks=4] stream 0x56129c6a94c0
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44670:44670 [3] NCCL INFO AllReduce: opCount 2 sendbuff 0x7f4f73746200 recvbuff 0x7f4f73746200 count 1 datatype 1 op 0 root 0 comm 0x7f4f2c000e00 [nranks=4] stream 0x5612b830be50
Validation sanity check:  50%|████████████████████████████████████████████████████████████████████████████████████████████████████████▌                                                                                                        | 1/2 [00:03<00:03,  3.06s/it]At validation_step, global_step= 0
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44670:44670 [0] NCCL INFO AllReduce: opCount 3 sendbuff 0x7f4ea9600000 recvbuff 0x7f4ea9600000 count 1 datatype 1 op 0 root 0 comm 0x7f4f34000e00 [nranks=4] stream 0x56129c6a94c0
6d4c7ddf-e133-482e-ac7d-237da037cd0f:44670:44670 [3] NCCL INFO AllReduce: opCount 3 sendbuff 0x7f4f73746c00 recvbuff 0x7f4f73746c00 count 1 datatype 1 op 0 root 0 comm 0x7f4f2c000e00 [nranks=4] stream 0x5612b830be50
    opened by lkfo415579 1
  • [Snyk] Security upgrade wheel from 0.30.0 to 0.38.0

    [Snyk] Security upgrade wheel from 0.30.0 to 0.38.0

    This PR was automatically created by Snyk using the credentials of a real user.


    Snyk has created this PR to fix one or more vulnerable packages in the `pip` dependencies of this project.

    Changes included in this PR

    • Changes to the following files to upgrade the vulnerable dependencies to a fixed version:
      • requirements.txt
    ⚠️ Warning 
    tensorboard 2.1.0 requires protobuf, which is not installed.
ray 0.8.0 requires faulthandler, which is not installed.
ray 0.8.0 requires jsonschema, which is not installed.
ray 0.8.0 requires protobuf, which is not installed.

    Vulnerabilities that will be fixed

    By pinning:

    Severity | Priority Score (*) | Issue | Upgrade | Breaking Change | Exploit Maturity :-------------------------:|-------------------------|:-------------------------|:-------------------------|:-------------------------|:------------------------- medium severity | 551/1000
    Why? Recently disclosed, Has a fix available, CVSS 5.3 | Regular Expression Denial of Service (ReDoS)
    SNYK-PYTHON-WHEEL-3180413 | wheel:
    0.30.0 -> 0.38.0
    | No | No Known Exploit

    (*) Note that the real score may have changed since the PR was raised.

    Some vulnerabilities couldn't be fully fixed and so Snyk will still find them when the project is tested again. This may be because the vulnerability existed within more than one direct dependency, but not all of the affected dependencies could be upgraded.

    Check the changes in this PR to ensure they won't cause issues with your project.

    Note: You are seeing this because you or someone else with access to this repository has authorized Snyk to open fix PRs.

    For more information: 🧐 View latest project report

    🛠 Adjust project settings

    📚 Read more about Snyk's upgrade and patch logic

    Learn how to fix vulnerabilities with free interactive lessons:

    🦉 Regular Expression Denial of Service (ReDoS)

    opened by tmbdev 0
  • [Snyk] Security upgrade setuptools from 39.0.1 to 65.5.1

    [Snyk] Security upgrade setuptools from 39.0.1 to 65.5.1

    This PR was automatically created by Snyk using the credentials of a real user.


    Snyk has created this PR to fix one or more vulnerable packages in the `pip` dependencies of this project.

    Changes included in this PR

    • Changes to the following files to upgrade the vulnerable dependencies to a fixed version:
      • requirements.txt
    ⚠️ Warning 
    tensorboard 2.1.0 requires protobuf, which is not installed.
tensorboard 2.1.0 requires grpcio, which is not installed.
tensorboard 2.1.0 has requirement setuptools>=41.0.0, but you have setuptools 39.0.1.
google-auth 1.35.0 has requirement setuptools>=40.3.0, but you have setuptools 39.0.1.

    Vulnerabilities that will be fixed

    By pinning:

    Severity | Priority Score (*) | Issue | Upgrade | Breaking Change | Exploit Maturity :-------------------------:|-------------------------|:-------------------------|:-------------------------|:-------------------------|:------------------------- low severity | 441/1000
    Why? Recently disclosed, Has a fix available, CVSS 3.1 | Regular Expression Denial of Service (ReDoS)
    SNYK-PYTHON-SETUPTOOLS-3113904 | setuptools:
    39.0.1 -> 65.5.1
    | No | No Known Exploit

    (*) Note that the real score may have changed since the PR was raised.

    Some vulnerabilities couldn't be fully fixed and so Snyk will still find them when the project is tested again. This may be because the vulnerability existed within more than one direct dependency, but not all of the affected dependencies could be upgraded.

    Check the changes in this PR to ensure they won't cause issues with your project.

    Note: You are seeing this because you or someone else with access to this repository has authorized Snyk to open fix PRs.

    For more information: 🧐 View latest project report

    🛠 Adjust project settings

    📚 Read more about Snyk's upgrade and patch logic

    Learn how to fix vulnerabilities with free interactive lessons:

    🦉 Regular Expression Denial of Service (ReDoS)

    opened by tmbdev 0
  • [Snyk] Security upgrade wheel from 0.30.0 to 0.38.0

    [Snyk] Security upgrade wheel from 0.30.0 to 0.38.0

    This PR was automatically created by Snyk using the credentials of a real user.


    Snyk has created this PR to fix one or more vulnerable packages in the `pip` dependencies of this project.

    Changes included in this PR

    • Changes to the following files to upgrade the vulnerable dependencies to a fixed version:
      • requirements.txt
    ⚠️ Warning 
    tensorboard 2.1.0 requires protobuf, which is not installed.
tensorboard 2.1.0 requires grpcio, which is not installed.
ray 0.8.0 requires protobuf, which is not installed.
ray 0.8.0 requires jsonschema, which is not installed.

    Vulnerabilities that will be fixed

    By pinning:

    Severity | Priority Score (*) | Issue | Upgrade | Breaking Change | Exploit Maturity :-------------------------:|-------------------------|:-------------------------|:-------------------------|:-------------------------|:------------------------- medium severity | 551/1000
    Why? Recently disclosed, Has a fix available, CVSS 5.3 | Regular Expression Denial of Service (ReDoS)
    SNYK-PYTHON-WHEEL-3092128 | wheel:
    0.30.0 -> 0.38.0
    | No | No Known Exploit

    (*) Note that the real score may have changed since the PR was raised.

    Some vulnerabilities couldn't be fully fixed and so Snyk will still find them when the project is tested again. This may be because the vulnerability existed within more than one direct dependency, but not all of the affected dependencies could be upgraded.

    Check the changes in this PR to ensure they won't cause issues with your project.

    Note: You are seeing this because you or someone else with access to this repository has authorized Snyk to open fix PRs.

    For more information: 🧐 View latest project report

    🛠 Adjust project settings

    📚 Read more about Snyk's upgrade and patch logic

    Learn how to fix vulnerabilities with free interactive lessons:

    🦉 Regular Expression Denial of Service (ReDoS)

    opened by tmbdev 0
  • [Snyk] Security upgrade wheel from 0.30.0 to 0.38.0

    [Snyk] Security upgrade wheel from 0.30.0 to 0.38.0

    This PR was automatically created by Snyk using the credentials of a real user.


    Snyk has created this PR to fix one or more vulnerable packages in the `pip` dependencies of this project.

    Changes included in this PR

    • Changes to the following files to upgrade the vulnerable dependencies to a fixed version:
      • requirements.txt
    ⚠️ Warning 
    tensorboard 2.1.0 requires protobuf, which is not installed.
tensorboard 2.1.0 requires grpcio, which is not installed.
ray 0.8.0 requires protobuf, which is not installed.
ray 0.8.0 requires jsonschema, which is not installed.

    Vulnerabilities that will be fixed

    By pinning:

    Severity | Priority Score (*) | Issue | Upgrade | Breaking Change | Exploit Maturity :-------------------------:|-------------------------|:-------------------------|:-------------------------|:-------------------------|:------------------------- medium severity | 551/1000
    Why? Recently disclosed, Has a fix available, CVSS 5.3 | Regular Expression Denial of Service (ReDoS)
    SNYK-PYTHON-WHEEL-3092128 | wheel:
    0.30.0 -> 0.38.0
    | No | No Known Exploit

    (*) Note that the real score may have changed since the PR was raised.

    Some vulnerabilities couldn't be fully fixed and so Snyk will still find them when the project is tested again. This may be because the vulnerability existed within more than one direct dependency, but not all of the affected dependencies could be upgraded.

    Check the changes in this PR to ensure they won't cause issues with your project.

    Note: You are seeing this because you or someone else with access to this repository has authorized Snyk to open fix PRs.

    For more information: 🧐 View latest project report

    🛠 Adjust project settings

    📚 Read more about Snyk's upgrade and patch logic

    Learn how to fix vulnerabilities with free interactive lessons:

    🦉 Regular Expression Denial of Service (ReDoS)

    opened by tmbdev 0
  • [Snyk] Security upgrade wheel from 0.30.0 to 0.38.0

    [Snyk] Security upgrade wheel from 0.30.0 to 0.38.0

    This PR was automatically created by Snyk using the credentials of a real user.


    Snyk has created this PR to fix one or more vulnerable packages in the `pip` dependencies of this project.

    Changes included in this PR

    • Changes to the following files to upgrade the vulnerable dependencies to a fixed version:
      • requirements.txt
    ⚠️ Warning 
    tensorboard 2.1.0 requires protobuf, which is not installed.
tensorboard 2.1.0 requires grpcio, which is not installed.
ray 0.8.0 requires protobuf, which is not installed.
ray 0.8.0 requires jsonschema, which is not installed.

    Vulnerabilities that will be fixed

    By pinning:

    Severity | Priority Score (*) | Issue | Upgrade | Breaking Change | Exploit Maturity :-------------------------:|-------------------------|:-------------------------|:-------------------------|:-------------------------|:------------------------- medium severity | 551/1000
    Why? Recently disclosed, Has a fix available, CVSS 5.3 | Regular Expression Denial of Service (ReDoS)
    SNYK-PYTHON-WHEEL-3092128 | wheel:
    0.30.0 -> 0.38.0
    | No | No Known Exploit

    (*) Note that the real score may have changed since the PR was raised.

    Some vulnerabilities couldn't be fully fixed and so Snyk will still find them when the project is tested again. This may be because the vulnerability existed within more than one direct dependency, but not all of the affected dependencies could be upgraded.

    Check the changes in this PR to ensure they won't cause issues with your project.

    Note: You are seeing this because you or someone else with access to this repository has authorized Snyk to open fix PRs.

    For more information: 🧐 View latest project report

    🛠 Adjust project settings

    📚 Read more about Snyk's upgrade and patch logic

    Learn how to fix vulnerabilities with free interactive lessons:

    🦉 Regular Expression Denial of Service (ReDoS)

    opened by tmbdev 0
  • [Snyk] Security upgrade ray from 1.0.1.post1 to 1.8.0

    [Snyk] Security upgrade ray from 1.0.1.post1 to 1.8.0

    This PR was automatically created by Snyk using the credentials of a real user.


    Snyk has created this PR to fix one or more vulnerable packages in the `pip` dependencies of this project.

    Changes included in this PR

    • Changes to the following files to upgrade the vulnerable dependencies to a fixed version:
      • requirements.txt
    ⚠️ Warning 
    tensorboard 2.1.0 requires protobuf, which is not installed.
ray 0.8.0 requires protobuf, which is not installed.
ray 0.8.0 requires jsonschema, which is not installed.

    Vulnerabilities that will be fixed

    By pinning:

    Severity | Priority Score (*) | Issue | Upgrade | Breaking Change | Exploit Maturity :-------------------------:|-------------------------|:-------------------------|:-------------------------|:-------------------------|:------------------------- medium severity | 616/1000
    Why? Proof of Concept exploit, Has a fix available, CVSS 5.9 | Race Condition
    SNYK-PYTHON-RAY-2308017 | ray:
    1.0.1.post1 -> 1.8.0
    | No | Proof of Concept

    (*) Note that the real score may have changed since the PR was raised.

    Some vulnerabilities couldn't be fully fixed and so Snyk will still find them when the project is tested again. This may be because the vulnerability existed within more than one direct dependency, but not all of the affected dependencies could be upgraded.

    Check the changes in this PR to ensure they won't cause issues with your project.

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    opened by tmbdev 0
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