Python Biomedical-image-processing Resources

SSRL-for-image-classification Semi-supervised Representation Learning for Remote Sensing Image Classification Based on Generative Adversarial Networks

Fast Image Retrieval (FIRe) is an open source image retrieval project release by Center of Image and Signal Processing Lab (CISiP Lab), Universiti Malaya. This project implements most of the major binary hashing methods to date, together with different popular backbone networks and public datasets.

CenterPose Overview This repository is the official implementation of the paper "Single-stage Keypoint-based Category-level Object Pose Estimation fro

SrbAI - Python biblioteka za procesiranje srpskog jezika SrbAI je projekat prikupljanja algoritama i modela za procesiranje srpskog jezika u jedinstve

Pnuemonia Normal detection by using XRay images. Got image datas from kaggle(link is given in sources.txt file) also normal xray images from other site (also link is given) in order to avoid data disbalancing.

Deceive D: Adaptive Pseudo Augmentation for GAN Training with Limited Data (NeurIPS 2021) This repository will provide the official PyTorch implementa

ISC-Track2-Submission The codes and related files to reproduce the results for Image Similarity Challenge Track 2. Required dependencies To begin with

ISC-Track1-Submission The codes and related files to reproduce the results for Image Similarity Challenge Track 1. Required dependencies To begin with

Spectral-spatial contrastive clustering (SSCC) Yaoming Cai, Yan Liu, Zijia Zhang, Zhihua Cai, and Xiaobo Liu, Large-scale Hyperspectral Image Clusteri

RobustBioNLP Improving the robustness and performance of biomedical NLP models through adversarial training In this repository you can find suppliment

PythonImage2PDF A simple Python script to convert multiple images into a single PDF-document. Created basically for only my own needs for converting m

imgAnalyser - Un script pour obtenir la liste des pixels d'une image correspondant à plusieurs couleurs Ce script à pour but, à partir d'une image, de

Image processing using OpenCv Write a program that opens the webcam, and the user selects one of the following on the video: ✅ If the user presses the

Fast Image Retrieval is an open source image retrieval framework release by Center of Image and Signal Processing Lab (CISiP Lab), Universiti Malaya. This framework implements most of the major binary hashing methods, together with both popular backbone networks and public datasets.

NWP Tools for downloading and processing numerical weather predictions At the moment, this code is focused on downloading historical UKV NWPs produced

gtk-image-selector This is an attempt to restore Gtk Image Chooser "lost functionality": displaying an image preview when selecting images... This is

The code in this toolbox implements the "Spectralformer: Rethinking hyperspectral image classification with transformers". More specifically, it is detailed as follow.

ObsPy is an open-source project dedicated to provide a Python framework for processing seismological data. It provides parsers for common file formats

Knock Knock A small library to get a notification when your training is complete or when it crashes during the process with two additional lines of co

PyTorch implementation of UNet++ (Nested U-Net) This repository contains code for a image segmentation model based on UNet++: A Nested U-Net Architect

Medical Image Segmentation with Guided Attention This repository contains the code of our paper: "'Multi-scale self-guided attention for medical image

Implementation for paper LadderNet: Multi-path networks based on U-Net for medical image segmentation This implementation is based on orobix implement

Attention Gated Networks (Image Classification & Segmentation) Pytorch implementation of attention gates used in U-Net and VGG-16 models. The framewor

Full-Resolution Residual Networks (FRRN) This repository contains code to train and qualitatively evaluate Full-Resolution Residual Networks (FRRNs) a

Multipath RefineNet A MATLAB based framework for semantic image segmentation and general dense prediction tasks on images. This is the source code for

Keras-ICNet [paper] Keras implementation of Real-Time Semantic Segmentation on High-Resolution Images. Training in progress! Requisites Python 3.6.3 K

Multi-Scale Context Aggregation by Dilated Convolutions Introduction Properties of dilated convolution are discussed in our ICLR 2016 conference paper

Keras implementation of DilatedNet for semantic segmentation A native Keras implementation of semantic segmentation according to Multi-Scale Context A

FC-DenseNet-Tensorflow This is a re-implementation of the 100 layer tiramisu, technically a fully convolutional DenseNet, in TensorFlow (Tiramisu). Th

MatConvNet implementation of the FCN models for semantic segmentation This package contains an implementation of the FCN models (training and evaluati

Train DeepLab for Semantic Image Segmentation Martin Kersner, [email protected] This repository contains scripts for training DeepLab for Semantic I

DeepLab-ResNet-TensorFlow This is an (re-)implementation of DeepLab-ResNet in TensorFlow for semantic image segmentation on the PASCAL VOC dataset. Up

DeepLab Introduction DeepLab is a state-of-art deep learning system for semantic image segmentation built on top of Caffe. It combines densely-compute

Segnet is deep fully convolutional neural network architecture for semantic pixel-wise segmentation. This is implementation of http://arxiv.org/pdf/15

Python library with Neural Networks for Image Segmentation based on Keras and TensorFlow. The main features of this library are: High level API (just

TernausNet: U-Net with VGG11 Encoder Pre-Trained on ImageNet for Image Segmentation By Vladimir Iglovikov and Alexey Shvets Introduction TernausNet is

Image Segmentation Keras : Implementation of Segnet, FCN, UNet, PSPNet and other models in Keras. Implementation of various Deep Image Segmentation mo

Tensorflow Unet Warning This project is discontinued in favour of a Tensorflow 2 compatible reimplementation of this project found under https://githu

Deep Learning Tutorial for Kaggle Ultrasound Nerve Segmentation competition, using Keras This tutorial shows how to use Keras library to build deep ne

ZF_UNET_224 Pretrained Model Modification of convolutional neural net "UNET" for image segmentation in Keras framework Requirements Python 3.*, Keras

Implementation of deep learning framework -- Unet, using Keras The architecture was inspired by U-Net: Convolutional Networks for Biomedical Image Seg

A combination of autoregressors and autoencoders using XLNet for sentiment analysis Abstract In this paper sentiment analysis has been performed in or

Sparse deconvolution Python v0.3.0 Official Python implementation of the 'Sparse deconvolution', and the CPU (NumPy) and GPU (CuPy) calculation backen

CNN Based Meta-Learning for Noisy Image Classification and Template Matching Introduction This master thesis used a few-shot meta learning approach to

The Curious Layperson: Fine-Grained Image Recognition without Expert Labels Subhabrata Choudhury, Iro Laina, Christian Rupprecht, Andrea Vedaldi Code

Date Time Expression dte is a WIP date-time processing language with focus on broad interpretation. If you don't think it's intuitive, it's most likel

A criticism of a recent paper on buggy image downsampling methods in popular image processing and deep learning libraries.

TTSR Official PyTorch implementation of the paper Learning Texture Transformer Network for Image Super-Resolution accepted in CVPR 2020. Contents Intr

napari-time-slicer A meta plugin for processing timelapse data timepoint by timepoint. It enables a list of napari plugins to process 2D+t or 3D+t dat

screenshot from the web for discord webhooks screenhook is a script that captures an image of a web page and send it to a discord webhook.

HINet Half Instance Normalization Network for Image Restoration, based on https://github.com/megvii-model/HINet. Dependencies NumPy PyTorch, preferabl

Created covid data pipeline using PySpark and MySQL that collected data stream from API and do some processing and store it into MYSQL database.

XUN_Langskip XUN 是一个基于 NoneBot 和 酷Q 的功能型QQ机器人，目前提供了音乐点播、音乐推荐、天气查询、RSSHub订阅、使用帮助、识图、识番、搜番、上车、磁力搜索、地震速报、计算、日语词典、翻译、自我检查，权限等级功能，由于是为了完成自己在群里的承诺，一时兴起才做的，所

Bulk Image Converter 🔥 Helper script to convert a folder's worth of images from one filetype to another, and optionally delete originals Use Setup /

Blind Image Super-resolution with Elaborate Degradation Modeling on Noise and Kernel This repository is the official PyTorch implementation of BSRDM w

PyTorch 图像分类 依赖库的下载与安装 在终端中执行 pip install -r -requirements.txt 完成项目依赖库的安装 使用方式 数据集的准备 STL10 数据集 下载：STL-10 Dataset 存储位置：将下载后的数据集中 train_X.bin,train_y.b

Voice Based Personal Assistant We have built a Voice based Personal Assistant for people to access files hands free in their device using natural lang

pystego Hide secret data within a digital image using good ol' terminal Installation The recommended way for installing this package is using, python

SCCKTIM Weakly Supervised 3D Object Detection from Point Cloud with Only Image-Level Annotation Our code will be available soon. The class knowledge t

strava-offline Overview strava-offline is a tool to keep a local mirror of Strava activities for further analysis/processing: synchronizes metadata ab

ChirpText is a collection of text processing tools for Python 3. It is not meant to be a powerful tank like the popular NTLK but a small package which

ProsePainter Create images by painting with words. ProsePainter combines direct digital painting with real-time guided machine-learning based image op

Aydin is a user-friendly, feature-rich, and fast image denoising tool that provides a number of self-supervised, auto-tuned, and unsupervised image denoising algorithms.

Object Detection Project Using OpenCV This project uses Template Matching technique for object detecting by detection the template image over base ima

Attention-Guided-Contextual-Feature-Fusion-Network-for-Salient-Object-Detection This repo. is an implementation of ACFFNet, which is accepted for in I

Digital Image Processing Python MATLAB codes of the book "Digital Image Processing Fourth Edition" converted to Python TO-DO: Refactor scripts, curren

Flexible-CLmser: Regularized Feedback Connections for Biomedical Image Segmentation The skip connections in U-Net pass features from the levels of enc

Facial Image Inpainting with Semantic Control In this repo, we provide a model for the controllable facial image inpainting task. This model enables u

Pixel Brush Processing Unit The Pixel Brush Processing Unit (PBPU for short) is a simple 4-Bit CPU I designed in Logisim while I was still in school a

Real-time stock predictions with deep learning and news scraping This repository contains a partial implementation of my bachelor's thesis "Real-time

HyperBlend version 0.1.0 This is the HyperBlend leaf spectra simulator developed in Spectral Laboratory of University of Jyväskylä. You can use and mo

BayeesNetworks-Image-Classification Alphabetical Letter Recognition In these demo we are using "Bayees Networks" Our database is composed by Learning

DecisionTrees-Image-Classification Alphabetical Letter Recognition In these demo we are using "Decision Trees" Our database is composed by Learning Im

Edge Tracing using Gaussian Process Regression Repository storing python module which implements a framework to trace individual edges in an image usi

Brain-Image-Segmentation Segmentation of brain tissues in MRI image has a number of applications in diagnosis, surgical planning, and treatment of bra

Seamless Satellite-image Synthesis by Jialin Zhu and Tom Kelly. Project site. The code of our models borrows heavily from the BicycleGAN repository an

Machine-in-the-Loop Rewriting for Creative Image Captioning Data Annotated sources of data used in the paper: Data Source URL Mohammed et al. Link Gor

Image Inpainting What is Image Inpainting Image inpainting is a restorative process that allows for the fixing or removal of unwanted parts within ima

Geometry Processing with Neural Fields Pytorch implementation for the NeurIPS 2021 paper: Geometry Processing with Neural Fields Guandao Yang, Serge B

AdaConv Unofficial PyTorch implementation of the Adaptive Convolution architecture for image style transfer from "Adaptive Convolutions for Structure-

An open-source online reverse dictionary.

Panel Competition Image Generator This project was build by a member of the NFH community and is open for everyone who wants to try it. Relevant links

TensorFlow 2 implementation of the Yahoo Open-NSFW model

About A terminal utility to sort image files based on their characteristics. Motivation This program was developed after I've realized that I had too

LANet Our work proposes an adaptive learning attention network (LANet) to solve the problem of color casts and low illumination in underwater images.

A person does not exist image bot

A not exist person image generator python module

POS-Tagger This repository details the creation of a Part-of-Speech tagger using Trigram Hidden Markov Models to predict word tags in a word sequence.

Obsei is a low code AI powered automation tool. It can be used in various business flows like social listening, AI based alerting, brand image analysis, comparative study and more .

Realtools (Web Tools for Horse Reality) These tools were made on request from a close friend of mine who plays this game. A live instance can be found

👀 OpenCV 101 Introduction to image processing, most used and popular functions of OpenCV go here.

Differentiable SVD Introduction This repository contains: The official Pytorch implementation of ICCV21 paper Why Approximate Matrix Square Root Outpe

English | 简体中文 PaddleGAN PaddleGAN provides developers with high-performance implementation of classic and SOTA Generative Adversarial Networks, and s

DIP-denosing This is a code repo for Rethinking Deep Image Prior for Denoising (ICCV 2021). Addressing the relationship between Deep image prior and e

Recurrent Mask Refinement for Few-Shot Medical Image Segmentation Steps Install any missing packages using pip or conda Preprocess each dataset using

PSS: Personalized Image Semantic Segmentation Paper PSS: Personalized Image Semantic Segmentation Yu Zhang, Chang-Bin Zhang, Peng-Tao Jiang, Ming-Ming

Parametric-Contrastive-Learning This repository contains the implementation code for ICCV2021 paper: Parametric Contrastive Learning (https://arxiv.or

FaPN: Feature-aligned Pyramid Network for Dense Image Prediction [arXiv] [Project Page] @inproceedings{ huang2021fapn, title={{FaPN}: Feature-alig

Zen-NAS: A Zero-Shot NAS for High-Performance Deep Image Recognition How Fast Compare to Other Zero-Shot NAS Proxies on CIFAR-10/100 Pre-trained Model

MicroNet: Improving Image Recognition with Extremely Low FLOPs (ICCV 2021) A pytorch implementation of MicroNet. If you use this code in your research