727 Repositories
Python graph-kernel Libraries
An official source code for paper Deep Graph Clustering via Dual Correlation Reduction, accepted by AAAI 2022
Dual Correlation Reduction Network An official source code for paper Deep Graph Clustering via Dual Correlation Reduction, accepted by AAAI 2022. Any
[AAAI 2022] Sparse Structure Learning via Graph Neural Networks for Inductive Document Classification
Sparse Structure Learning via Graph Neural Networks for inductive document classification Make graph dataset create co-occurrence graph for datasets.
A computational block to solve entity alignment over textual attributes in a knowledge graph creation pipeline.
How to apply? Create your config.ini file following the example provided in config.ini Choose one of the options below to run: Run with Python3 pip in
The source code of the paper "SHGNN: Structure-Aware Heterogeneous Graph Neural Network"
SHGNN: Structure-Aware Heterogeneous Graph Neural Network The source code and dataset of the paper: SHGNN: Structure-Aware Heterogeneous Graph Neural
Semantic graph parser based on Categorial grammars
Lambekseq "Everyone who failed Greek or Latin hates it." This package is for proving theorems in Categorial grammars (CG) and constructing semantic gr
RDFLib is a Python library for working with RDF, a simple yet powerful language for representing information.
RDFLib RDFLib is a pure Python package for working with RDF. RDFLib contains most things you need to work with RDF, including: parsers and serializers
PyG (PyTorch Geometric) - A library built upon PyTorch to easily write and train Graph Neural Networks (GNNs)
PyG (PyTorch Geometric) is a library built upon PyTorch to easily write and train Graph Neural Networks (GNNs) for a wide range of applications related to structured data.
Diverse graph algorithms implemented using JGraphT library.
# 1. Installing Maven & Pandas First, please install Java (JDK11) and Python 3 if they are not already. Next, make sure that Maven (for importing J
Official Implementation of "LUNAR: Unifying Local Outlier Detection Methods via Graph Neural Networks"
LUNAR Official Implementation of "LUNAR: Unifying Local Outlier Detection Methods via Graph Neural Networks" Adam Goodge, Bryan Hooi, Ng See Kiong and
Official PyTorch implementation of the paper "Graph-based Generative Face Anonymisation with Pose Preservation" in ICIAP 2021
Contents AnonyGAN Installation Dataset Preparation Generating Images Using Pretrained Model Train and Test New Models Evaluation Acknowledgments Citat
A simple Monte Carlo simulation using Python and matplotlib library
Monte Carlo python simulation Install linux dependencies sudo apt update sudo apt install build-essential \ software-properties-commo
1st Solution For NeurIPS 2021 Competition on ML4CO Dual Task
KIDA: Knowledge Inheritance in Data Aggregation This project releases our 1st place solution on NeurIPS2021 ML4CO Dual Task. Slide and model weights a
In-memory Graph Database and Knowledge Graph with Natural Language Interface, compatible with Pandas
CogniPy for Pandas - In-memory Graph Database and Knowledge Graph with Natural Language Interface Whats in the box Reasoning, exploration of RDF/OWL,
WSDM2022 Challenge - Large scale temporal graph link prediction
WSDM 2022 Large-scale Temporal Graph Link Prediction - Baseline and Initial Test Set WSDM Cup Website link Link to this challenge This branch offers A
Implementation of Heterogeneous Graph Attention Network
HetGAN Implementation of Heterogeneous Graph Attention Network This is the code repository of paper "Prediction of Metro Ridership During the COVID-19
Scripts and outputs related to the paper Prediction of Adverse Biological Effects of Chemicals Using Knowledge Graph Embeddings.
Knowledge Graph Embeddings and Chemical Effect Prediction, 2020. Scripts and outputs related to the paper Prediction of Adverse Biological Effects of
Enhancing Column Generation by a Machine-Learning-BasedPricing Heuristic for Graph Coloring
Enhancing Column Generation by a Machine-Learning-BasedPricing Heuristic for Graph Coloring (to appear at AAAI 2022) We propose a machine-learning-bas
The source code for Adaptive Kernel Graph Neural Network at AAAI2022
AKGNN The source code for Adaptive Kernel Graph Neural Network at AAAI2022. Please cite our paper if you think our work is helpful to you: @inproceedi
Wikidated : An Evolving Knowledge Graph Dataset of Wikidata’s Revision History
Wikidated Wikidated 1.0 is a dataset of Wikidata’s full revision history, which encodes changes between Wikidata revisions as sets of deletions and ad
[KDD 2021, Research Track] DiffMG: Differentiable Meta Graph Search for Heterogeneous Graph Neural Networks
DiffMG This repository contains the code for our KDD 2021 Research Track paper: DiffMG: Differentiable Meta Graph Search for Heterogeneous Graph Neura
Conflict-aware Inference of Python Compatible Runtime Environments with Domain Knowledge Graph, ICSE 2022
PyCRE Conflict-aware Inference of Python Compatible Runtime Environments with Domain Knowledge Graph, ICSE 2022 Dependencies This project is developed
Official Implementation of "LUNAR: Unifying Local Outlier Detection Methods via Graph Neural Networks"
LUNAR Official Implementation of "LUNAR: Unifying Local Outlier Detection Methods via Graph Neural Networks" Adam Goodge, Bryan Hooi, Ng See Kiong and
This repository is an implementation of paper : Improving the Training of Graph Neural Networks with Consistency Regularization
CRGNN Paper : Improving the Training of Graph Neural Networks with Consistency Regularization Environments Implementing environment: GeForce RTX™ 3090
Junction Tree Variational Autoencoder for Molecular Graph Generation (ICML 2018)
Junction Tree Variational Autoencoder for Molecular Graph Generation Official implementation of our Junction Tree Variational Autoencoder https://arxi
Meandering In Networks of Entities to Reach Verisimilar Answers
MINERVA Meandering In Networks of Entities to Reach Verisimilar Answers Code and models for the paper Go for a Walk and Arrive at the Answer - Reasoni
A new framework, collaborative cascade prediction based on graph neural networks (CCasGNN) to jointly utilize the structural characteristics, sequence features, and user profiles.
CCasGNN A new framework, collaborative cascade prediction based on graph neural networks (CCasGNN) to jointly utilize the structural characteristics,
"Graph Neural Controlled Differential Equations for Traffic Forecasting", AAAI 2022
Graph Neural Controlled Differential Equations for Traffic Forecasting Setup Python environment for STG-NCDE Install python environment $ conda env cr
Graph WaveNet apdapted for brain connectivity analysis.
Graph WaveNet for brain network analysis This is the implementation of the Graph WaveNet model used in our manuscript: S. Wein , A. Schüller, A. M. To
This repository is an implementation of paper : Improving the Training of Graph Neural Networks with Consistency Regularization
CRGNN Paper : Improving the Training of Graph Neural Networks with Consistency Regularization Environments Implementing environment: GeForce RTX™ 3090
A python script to visualise explain plans as a graph using graphviz
README Needs to be improved Prerequisites Need to have graphiz installed on the machine. Refer to https://graphviz.readthedocs.io/en/stable/manual.htm
Federated learning on graph, especially on graph neural networks (GNNs), knowledge graph, and private GNN.
Federated learning on graph, especially on graph neural networks (GNNs), knowledge graph, and private GNN.
Papers about explainability of GNNs
Papers about explainability of GNNs
Extracts data from the database for a graph-node and stores it in parquet files
subgraph-extractor Extracts data from the database for a graph-node and stores it in parquet files Installation For developing, it's recommended to us
Translate darknet to tensorflow. Load trained weights, retrain/fine-tune using tensorflow, export constant graph def to mobile devices
Intro Real-time object detection and classification. Paper: version 1, version 2. Read more about YOLO (in darknet) and download weight files here. In
Plots the graph of a function with ASCII characters.
ASCII Graph Plotter Plots the graph of a function with ASCII characters. See the change log here. Developed by InformaticFreak (c) 2021 How to use py
Graph Posterior Network: Bayesian Predictive Uncertainty for Node Classification (NeurIPS 2021)
Graph Posterior Network This is the official code repository to the paper Graph Posterior Network: Bayesian Predictive Uncertainty for Node Classifica
Convert ONNX model graph to Keras model format.
Convert ONNX model graph to Keras model format.
CTO (Call Tree Overviewer) is an IDA plugin for creating a simple and efficiant function call tree graph
CTO (Call Tree Overviewer) CTO (Call Tree Overviewer) is an IDA plugin for creating a simple and efficiant function call tree graph. It can also summa
Source code and dataset of the paper "Contrastive Adaptive Propagation Graph Neural Networks forEfficient Graph Learning"
CAPGNN Source code and dataset of the paper "Contrastive Adaptive Propagation Graph Neural Networks forEfficient Graph Learning" Paper URL: https://ar
TC-GNN with Pytorch integration
TC-GNN (Running Sparse GNN on Dense Tensor Core on Ampere GPU) Cite this project and paper. @inproceedings{TC-GNN, title={TC-GNN: Accelerating Spars
Open-CyKG: An Open Cyber Threat Intelligence Knowledge Graph
Open-CyKG: An Open Cyber Threat Intelligence Knowledge Graph Model Description Open-CyKG is a framework that is constructed using an attenti
Code for paper Decoupled Dynamic Spatial-Temporal Graph Neural Network for Traffic Forecasting
Decoupled Spatial-Temporal Graph Neural Networks Code for our paper: Decoupled Dynamic Spatial-Temporal Graph Neural Network for Traffic Forecasting.
An echo kernel for JupyterLite
jupyterlite-echo-kernel An echo kernel for JupyterLite. Requirements JupyterLite = 0.1.0a10 Install To install the extension, execute: pip install ju
Official implementation for the paper: Permutation Invariant Graph Generation via Score-Based Generative Modeling
Permutation Invariant Graph Generation via Score-Based Generative Modeling This repo contains the official implementation for the paper Permutation In
Source code for our paper "Molecular Mechanics-Driven Graph Neural Network with Multiplex Graph for Molecular Structures"
Molecular Mechanics-Driven Graph Neural Network with Multiplex Graph for Molecular Structures Code for the Multiplex Molecular Graph Neural Network (M
[NeurIPS-2021] Slow Learning and Fast Inference: Efficient Graph Similarity Computation via Knowledge Distillation
Efficient Graph Similarity Computation - (EGSC) This repo contains the source code and dataset for our paper: Slow Learning and Fast Inference: Effici
IDA Pro Python plugin to analyze and annotate Linux kernel alternatives
About This is an IDA Pro (Interactive Disassembler) plugin allowing to automatically analyze and annotate Linux kernel alternatives (content of .altin
Spatial Temporal Graph Convolutional Networks (ST-GCN) for Skeleton-Based Action Recognition in PyTorch
Reminder ST-GCN has transferred to MMSkeleton, and keep on developing as an flexible open source toolbox for skeleton-based human understanding. You a
Educational 2D SLAM implementation based on ICP and Pose Graph
slam-playground Educational 2D SLAM implementation based on ICP and Pose Graph How to use: Use keyboard arrow keys to navigate robot. Press 'r' to vie
Code for ACL 2019 Paper: "COMET: Commonsense Transformers for Automatic Knowledge Graph Construction"
To run a generation experiment (either conceptnet or atomic), follow these instructions: First Steps First clone, the repo: git clone https://github.c
Sorce code and datasets for "K-BERT: Enabling Language Representation with Knowledge Graph",
K-BERT Sorce code and datasets for "K-BERT: Enabling Language Representation with Knowledge Graph", which is implemented based on the UER framework. R
Paddle Graph Learning (PGL) is an efficient and flexible graph learning framework based on PaddlePaddle
DOC | Quick Start | 中文 Breaking News !! 🔥 🔥 🔥 OGB-LSC KDD CUP 2021 winners announced!! (2021.06.17) Super excited to announce our PGL team won TWO
PyTorch(Geometric) implementation of G^2GNN in "Imbalanced Graph Classification via Graph-of-Graph Neural Networks"
This repository is an official PyTorch(Geometric) implementation of G^2GNN in "Imbalanced Graph Classification via Graph-of-Graph Neural Networks". Th
[NeurIPS-2021] Slow Learning and Fast Inference: Efficient Graph Similarity Computation via Knowledge Distillation
Efficient Graph Similarity Computation - (EGSC) This repo contains the source code and dataset for our paper: Slow Learning and Fast Inference: Effici
Code and Data for the paper: Molecular Contrastive Learning with Chemical Element Knowledge Graph [AAAI 2022]
Knowledge-enhanced Contrastive Learning (KCL) Molecular Contrastive Learning with Chemical Element Knowledge Graph [ AAAI 2022 ]. We construct a Chemi
Graph Self-Attention Network for Learning Spatial-Temporal Interaction Representation in Autonomous Driving
GSAN Introduction Code for paper GSAN: Graph Self-Attention Network for Learning Spatial-Temporal Interaction Representation in Autonomous Driving, wh
Python ts2vg package provides high-performance algorithm implementations to build visibility graphs from time series data.
ts2vg: Time series to visibility graphs The Python ts2vg package provides high-performance algorithm implementations to build visibility graphs from t
Self-Supervised Learning with Kernel Dependence Maximization
Self-Supervised Learning with Kernel Dependence Maximization This is the code for SSL-HSIC, a self-supervised learning loss proposed in the paper Self
PLUR is a collection of source code datasets suitable for graph-based machine learning.
PLUR (Programming-Language Understanding and Repair) is a collection of source code datasets suitable for graph-based machine learning. We provide scripts for downloading, processing, and loading the datasets. This is done by offering a unified API and data structures for all datasets.
[KBS] Aspect-based sentiment analysis via affective knowledge enhanced graph convolutional networks
#Sentic GCN Introduction This repository was used in our paper: Aspect-Based Sentiment Analysis via Affective Knowledge Enhanced Graph Convolutional N
Code for the AAAI 2022 paper "Zero-Shot Cross-Lingual Machine Reading Comprehension via Inter-Sentence Dependency Graph".
multilingual-mrc-isdg Code for the AAAI 2022 paper "Zero-Shot Cross-Lingual Machine Reading Comprehension via Inter-Sentence Dependency Graph". This r
An official PyTorch implementation of the TKDE paper "Self-Supervised Graph Representation Learning via Topology Transformations".
Self-Supervised Graph Representation Learning via Topology Transformations This repository is the official PyTorch implementation of the following pap
A library for implementing Decentralized Graph Neural Network algorithms.
decentralized-gnn A package for implementing and simulating decentralized Graph Neural Network algorithms for classification of peer-to-peer nodes. De
Decoding the Protein-ligand Interactions Using Parallel Graph Neural Networks
Decoding the Protein-ligand Interactions Using Parallel Graph Neural Networks Requirements python 0.10+ rdkit 2020.03.3.0 biopython 1.78 openbabel 2.4
Code base for NeurIPS 2021 publication titled Kernel Functional Optimisation (KFO)
KernelFunctionalOptimisation Code base for NeurIPS 2021 publication titled Kernel Functional Optimisation (KFO) We have conducted all our experiments
[NeurIPS '21] Adversarial Attacks on Graph Classification via Bayesian Optimisation (GRABNEL)
Adversarial Attacks on Graph Classification via Bayesian Optimisation @ NeurIPS 2021 This repository contains the official implementation of GRABNEL,
Discovering Dynamic Salient Regions with Spatio-Temporal Graph Neural Networks
Discovering Dynamic Salient Regions with Spatio-Temporal Graph Neural Networks This is the official code for DyReg model inroduced in Discovering Dyna
Pytorch implementation of the paper "Topic Modeling Revisited: A Document Graph-based Neural Network Perspective"
Graph Neural Topic Model (GNTM) This is the pytorch implementation of the paper "Topic Modeling Revisited: A Document Graph-based Neural Network Persp
Representing Long-Range Context for Graph Neural Networks with Global Attention
Graph Augmentation Graph augmentation/self-supervision/etc. Algorithms gcn gcn+virtual node gin gin+virtual node PNA GraphTrans Augmentation methods N
Code for 2021 NeurIPS --- Towards Multi-Grained Explainability for Graph Neural Networks
ReFine: Multi-Grained Explainability for GNNs We are trying hard to update the code, but it may take a while to complete due to our tight schedule rec
The official implementation of EIGNN: Efficient Infinite-Depth Graph Neural Networks (NeurIPS 2021)
EIGNN: Efficient Infinite-Depth Graph Neural Networks The official implementation of EIGNN: Efficient Infinite-Depth Graph Neural Networks (NeurIPS 20
The PyTorch implementation of Directed Graph Contrastive Learning (DiGCL), NeurIPS-2021
Directed Graph Contrastive Learning Paper | Poster | Supplementary The PyTorch implementation of Directed Graph Contrastive Learning (DiGCL). In this
Code for "Solving Graph-based Public Good Games with Tree Search and Imitation Learning"
Code for "Solving Graph-based Public Good Games with Tree Search and Imitation Learning" This is the code for the paper Solving Graph-based Public Goo
A iot Bike sytem based on RaspberryPi, Ardiuino
Cyclic 's Kernel ---- A iot Bike sytem based on RaspberryPi, Ardiuino, etc 0x1 What is This? Cyclic 's Kernel is an independent System With self-produ
A Python library for Deep Graph Networks
PyDGN Wiki Description This is a Python library to easily experiment with Deep Graph Networks (DGNs). It provides automatic management of data splitti
ESP32 recording button presses, and serving webpage that graphs the numbers over time.
ESP32-IoT-button-graph-test ESP32 recording button presses, and serving webpage via webSockets in order to graph the responses. The objective was to t
GraphRNN: Generating Realistic Graphs with Deep Auto-regressive Models
GraphRNN: Generating Realistic Graphs with Deep Auto-regressive Model This repository is the official PyTorch implementation of GraphRNN, a graph gene
Accompanying code for the paper "A Kernel Test for Causal Association via Noise Contrastive Backdoor Adjustment".
#backdoor-HSIC (bd_HSIC) Accompanying code for the paper "A Kernel Test for Causal Association via Noise Contrastive Backdoor Adjustment". To generate
KDD CUP 2020 Automatic Graph Representation Learning: 1st Place Solution
KDD CUP 2020: AutoGraph Team: aister Members: Jianqiang Huang, Xingyuan Tang, Mingjian Chen, Jin Xu, Bohang Zheng, Yi Qi, Ke Hu, Jun Lei Team Introduc
This is a code repository for the paper "Graph Auto-Encoders for Financial Clustering".
Repository for the paper "Graph Auto-Encoders for Financial Clustering" Requirements Python 3.6 torch torch_geometric Instructions This is a simple c
E-Commerce recommender demo with real-time data and a graph database
🔍 E-Commerce recommender demo 🔍 This is a simple stream setup that uses Memgraph to ingest real-time data from a simulated online store. Data is str
Learning from graph data using Keras
Steps to run = Download the cora dataset from this link : https://linqs.soe.ucsc.edu/data unzip the files in the folder input/cora cd code python eda
Kernel Point Convolutions
Created by Hugues THOMAS Introduction Update 27/04/2020: New PyTorch implementation available. With SemanticKitti, and Windows supported. This reposit
Implementation of ICCV19 Paper "Learning Two-View Correspondences and Geometry Using Order-Aware Network"
OANet implementation Pytorch implementation of OANet for ICCV'19 paper "Learning Two-View Correspondences and Geometry Using Order-Aware Network", by
🧮A simple calculator written in python allows you to make simple calculations, write charts, calculate the dates, and exchange currency.
Calculator 🖩 A simple calculator written in python allows you to make simple calculations, write charts, calculate the dates, and exchange currency.
Paper: Cross-View Kernel Similarity Metric Learning Using Pairwise Constraints for Person Re-identification
Cross-View Kernel Similarity Metric Learning Using Pairwise Constraints for Person Re-identification T M Feroz Ali, Subhasis Chaudhuri, ICVGIP-20-21
SPTAG: A library for fast approximate nearest neighbor search
SPTAG: A library for fast approximate nearest neighbor search SPTAG SPTAG (Space Partition Tree And Graph) is a library for large scale vector approxi
Towards Open-World Feature Extrapolation: An Inductive Graph Learning Approach
This repository holds the implementation for paper Towards Open-World Feature Extrapolation: An Inductive Graph Learning Approach Download our preproc
Implementation of the Paper: "Parameterized Hypercomplex Graph Neural Networks for Graph Classification" by Tuan Le, Marco Bertolini, Frank Noé and Djork-Arné Clevert
Parameterized Hypercomplex Graph Neural Networks (PHC-GNNs) PHC-GNNs (Le et al., 2021): https://arxiv.org/abs/2103.16584 PHM Linear Layer Illustration
(NeurIPS 2021) Pytorch implementation of paper "Re-ranking for image retrieval and transductive few-shot classification"
SSR (NeurIPS 2021) Pytorch implementation of paper "Re-ranking for image retrieval and transductivefew-shot classification" [Paper] [Project webpage]
Official implementation of the paper "Steganographer Detection via a Similarity Accumulation Graph Convolutional Network"
SAGCN - Official PyTorch Implementation | Paper | Project Page This is the official implementation of the paper "Steganographer detection via a simila
g2o: A General Framework for Graph Optimization
g2o - General Graph Optimization Linux: Windows: g2o is an open-source C++ framework for optimizing graph-based nonlinear error functions. g2o has bee
Awesome Deep Graph Clustering is a collection of SOTA, novel deep graph clustering methods
ADGC: Awesome Deep Graph Clustering ADGC is a collection of state-of-the-art (SOTA), novel deep graph clustering methods (papers, codes and datasets).
A small collection of tools made by me, that you can use to visualize atomic orbitals in both 2D and 3D in different aspects.
Orbitals in Python A small collection of tools made by me, that you can use to visualize atomic orbitals in both 2D and 3D in different aspects, and o
Official implementation of SIGIR'2021 paper: "Sequential Recommendation with Graph Neural Networks".
SURGE: Sequential Recommendation with Graph Neural Networks This is our TensorFlow implementation for the paper: Sequential Recommendation with Graph
Tandem Mass Spectrum Prediction with Graph Transformers
MassFormer This is the original implementation of MassFormer, a graph transformer for small molecule MS/MS prediction. Check out the preprint on arxiv
Machine Learning Framework for Operating Systems - Brings ML to Linux kernel
KML: A Machine Learning Framework for Operating Systems & Storage Systems Storage systems and their OS components are designed to accommodate a wide v
ChebLieNet, a spectral graph neural network turned equivariant by Riemannian geometry on Lie groups.
ChebLieNet: Invariant spectral graph NNs turned equivariant by Riemannian geometry on Lie groups Hugo Aguettaz, Erik J. Bekkers, Michaël Defferrard We
Official Codes for Graph Modularity:Towards Understanding the Cross-Layer Transition of Feature Representations in Deep Neural Networks.
Dynamic-Graphs-Construction Official Codes for Graph Modularity:Towards Understanding the Cross-Layer Transition of Feature Representations in Deep Ne
Two-Stream Adaptive Graph Convolutional Networks for Skeleton-Based Action Recognition in CVPR19
2s-AGCN Two-Stream Adaptive Graph Convolutional Networks for Skeleton-Based Action Recognition in CVPR19 Note PyTorch version should be 0.3! For PyTor