Python Ripe-atlas Resources

Multi-atlas segmentation (MAS) is a promising framework for medical image segmentation. Generally, MAS methods register multiple atlases, i.e., medical images with corresponding labels, to a target image;

Movies_api A CRUD and REST api with mongodb atlas. Setup First import all the python dependencies in your virtual environment or globally by the follo

maweight A Python package for multi-atlas based weight estimation for CT images, including segmentation by registration, feature extraction and model

Instagram Bot 🤖 July 14, 2021 Overview 👍 A multifunctionality automated instagram bot that can mass text users, receive and read a message and store

foundations-auth-proxy Setup By default the server runs on http://0.0.0.0:5558. This can be changed via the arguments. Arguments: '-H' or '--host': ho

Multi-template MRI mouse brain atlas (both in vivo and ex vivo) Mouse Brain MRI atlas (both in-vivo and ex-vivo) (repository relocated from the origin

CaloGAN Simulating 3D High Energy Particle Showers in Multi-Layer Electromagnetic Calorimeters with Generative Adversarial Networks. This repository c

A Python library for working with the RIPE Atlas anchoring mesh. fetchmesh is a tool to simplify working with Atlas anchoring mesh measurements. It ca

starfish: scalable pipelines for image-based transcriptomics starfish is a Python library for processing images of image-based spatial transcriptomics

Small Lesion Segmentation in Brain MRIs with Subpixel Embedding PyTorch implementation of Small Lesion Segmentation in Brain MRIs with Subpixel Embedd

Brain Augmented Reality (AR) A neuroanatomy-based augmented reality experience powered by computer vision that features 3D visuals of the Atlas Brain

kaggle-hpa-2021-7th-place-solution Code for 7th place solution of Human Protein Atlas - Single Cell Classification on Kaggle. A description of the met