Python DNA-sequence-classification-by-Deep-Neural-Network Resources

PLUR (Programming-Language Understanding and Repair) is a collection of source code datasets suitable for graph-based machine learning. We provide scripts for downloading, processing, and loading the datasets. This is done by offering a unified API and data structures for all datasets.

VT-UNet This repo contains the supported pytorch code and configuration files to reproduce 3D medical image segmentaion results of VT-UNet. Environmen

PyTorch-trainer-and-model-for-Sequence-Classification After cloning the repository, modify your training data so that the training data is a .csv file

This Tool can help enginners and biggener in network, the tool help you to find of any ip with subnet mask that can calucate them and show you ( Availble IP's , Subnet Mask, Network-ID, Broadcast-ID )

RewriteNAT This repo provides the code for reproducing our proposed RewriteNAT in EMNLP 2021 paper entitled "Learning to Rewrite for Non-Autoregressiv

Local Similarity Pattern and Cost Self-Reassembling for Deep Stereo Matching Networks Contributions A novel pairwise feature LSP to extract structural

Repositori belajar network automation dengan Docker, Python & GNS3 Using Frameworks and integrate with: Paramiko Netmiko Telnetlib CSV SFTP Netmiko, S

Fileshare 📨 Share files easily over your local network from the terminal! 📨 Installation #

aioquic What is aioquic? aioquic is a library for the QUIC network protocol in Python. It features a minimal TLS 1.3 implementation, a QUIC stack and

Decentra Network is an open source blockchain that combines speed, security and decentralization. Decentra Network has very high speeds, scalability, asymptotic security and complete decentralization.

Miniattack Simulate Attacks With Mininet And Hping3 It measures network load with bwm-ng when the net is under attack and plots the result. This demo

A Light CNN for Deep Face Representation with Noisy Labels Citation If you use our models, please cite the following paper: @article{wulight, title=

Milano (This is a research project, not an official NVIDIA product.) Documentation https://nvidia.github.io/Milano Milano (Machine learning autotuner

I3D models transfered from Tensorflow to PyTorch This repo contains several scripts that allow to transfer the weights from the tensorflow implementat

hey-daug A light weight data augmentation tool for training CNNs and Viola Jones detectors (Haar Cascades). This tool inflates your data by up to six

ReacNetGenerator An automatic reaction network generator for reactive molecular dynamics simulation. ReacNetGenerator: an automatic reaction network g

An easy-to-use WebUI for crypto plotting and farming. Offers Plotman, MadMax, Chiadog, Bladebit, Farmr, and Forktools in a Docker container. Supports Chia, Cactus, Chives, Flax, Flora, HDDCoin, Maize, N-Chain, Staicoin, and Stor among others.

Suez Tool for pretty printing and optimizing Lightning Network channels. Installation Install poetry poetry install poetry run ./suez Channel fee poli

Surface water network Creates surface water network, which can be used to create MODFLOW's SFR. Python packages Python 3.6+ is required. Required geop

python-can The Controller Area Network is a bus standard designed to allow microcontrollers and devices to communicate with each other. It has priorit

Darknet Darknet is an open source neural network framework written in C and CUDA. It is fast, easy to install, and supports CPU and GPU computation. D

Reproduce ResNet-v2 using MXNet Requirements Install MXNet on a machine with CUDA GPU, and it's better also installed with cuDNN v5 Please fix the ran

DISTIL: Deep dIverSified inTeractIve Learning. An active/inter-active learning library built on py-torch for reducing labeling costs.

BERTAC (BERT-style transformer-based language model with Adversarially pretrained Convolutional neural network) BERTAC is a framework that combines a

structural-probes Codebase for testing whether hidden states of neural networks encode discrete structures. Based on the paper A Structural Probe for

TextFooler A Model for Natural Language Attack on Text Classification and Inference This is the source code for the paper: Jin, Di, et al. "Is BERT Re

Codebase for training transformers on systematic generalization datasets. The official repository for our EMNLP 2021 paper The Devil is in the Detail:

ELECTRA Introduction ELECTRA is a method for self-supervised language representation learning. It can be used to pre-train transformer networks using

DeepSpeed+Megatron trained the world's most powerful language model: MT-530B DeepSpeed is hiring, come join us! DeepSpeed is a deep learning optimizat

Continuous Sparsification Implementation of Continuous Sparsification (CS), a method based on l_0 regularization to find sparse neural networks, propo

New Release We released Adversarial training for both LM pre-training/finetuning and f-divergence. Large-scale Adversarial training for LMs: ALUM code

BERTGEN This repository is the implementation of the paper "BERTGEN: Multi-task Generation through BERT" (https://arxiv.org/abs/2106.03484). The codeb

Pattern-Exploiting Training (PET) This repository contains the code for Exploiting Cloze Questions for Few-Shot Text Classification and Natural Langua

T-DNA Source code for the ACL-IJCNLP 2021 paper entitled Taming Pre-trained Language Models with N-gram Representations for Low-Resource Domain Adapta

MoT - Molecular Transformer Large-scale Pretraining for Molecular Property Prediction Samsung AI Challenge for Scientific Discovery This repository is

DeepTCN TensorFlow TensorFlow (Python) implementation of multivariate time series forecasting model introduced in Chen, Y., Kang, Y., Chen, Y., & Wang

Isaac ROS Pose Estimation Overview This repository provides NVIDIA GPU-accelerated packages for 3D object pose estimation. Using a deep learned pose e

🌟 HNSW + PostgreSQL Indexer HNSWPostgreSQLIndexer Jina is a production-ready, scalable Indexer for the Jina neural search framework. It combines the

Generative Image Inpainting An open source framework for generative image inpainting task, with the support of Contextual Attention (CVPR 2018) and Ga

Website • Docs • Twitter • Join Slack Community What is Label Studio? Label Studio is an open source data labeling tool. It lets you label data types

semanticsearch This is a deep learning based semantic search platform that computes similarity scores between provided query and documents. Documents

HybridBackend Introduction HybridBackend is a training framework for deep recommenders which bridges the gap between evolving cloud infrastructure and

torchx Torchx is a general framework for deep learning experiments under PyTorch based on pytorch-lightning. TODO list gan-like training wrapper text

Attention Is All You Need Paper Implementation This is my from-scratch implementation of the original transformer architecture from the following pape

Multipath-Load-Balancing Method of managing incoming traffic by distributing and sharing load fairly among multiple routes from source to destination

S1SuperTimeline A command line tool that creates a super timeline from SentinelOne's Deep Visibility data What does it do? The script accepts a S1QL q

DeepGeneAnnotator: A tool to annotate the gene in the genome The master thesis of the "Using deep learning to predict gene structures of the coding ge

pytm: A Pythonic framework for threat modeling Introduction Traditional threat modeling too often comes late to the party, or sometimes not at all. In

High-resolution networks (HRNets) for Image classification News [2021/01/20] Add some stronger ImageNet pretrained models, e.g., the HRNet_W48_C_ssld_

fpn.pytorch Pytorch implementation of Feature Pyramid Network (FPN) for Object Detection Introduction This project inherits the property of our pytorc

Octave Convolution MXNet implementation for: Drop an Octave: Reducing Spatial Redundancy in Convolutional Neural Networks with Octave Convolution Imag

Open-ReID Open-ReID is a lightweight library of person re-identification for research purpose. It aims to provide a uniform interface for different da

UnFlow: Unsupervised Learning of Optical Flow with a Bidirectional Census Loss This repository contains the TensorFlow implementation of the paper UnF

ClearML - Auto-Magical Suite of tools to streamline your ML workflow Experiment Manager, MLOps and Data-Management ClearML Formerly known as Allegro T

PPML-TSA This repository provides all code necessary to reproduce the results reported in our paper Evaluating Privacy-Preserving Machine Learning in

DAFormer: Improving Network Architectures and Training Strategies for Domain-Adaptive Semantic Segmentation [Arxiv] [Paper] As acquiring pixel-wise an

decentralized-gnn A package for implementing and simulating decentralized Graph Neural Network algorithms for classification of peer-to-peer nodes. De

DeepAL: Deep Active Learning in Python Python implementations of the following active learning algorithms: Random Sampling Least Confidence [1] Margin

Decoding the Protein-ligand Interactions Using Parallel Graph Neural Networks Requirements python 0.10+ rdkit 2020.03.3.0 biopython 1.78 openbabel 2.4

PyContinual (An Easy and Extendible Framework for Continual Learning) Easy to Use You can sumply change the baseline, backbone and task, and then read

DominoSearch This is repository for codes and models of NeurIPS2021 paper - DominoSearch: Find layer-wise fine-grained N:M sparse schemes from dense n

[NeurIPS 2021 Spotlight] HELP: Hardware-adaptive Efficient Latency Prediction for NAS via Meta-Learning [Paper] This is Official PyTorch implementatio

Representer Point Selection via Local Jacobian Expansion for Classifier Explanation of Deep Neural Networks and Ensemble Models This repository is the

LMMNN Using Random Effects to Account for High-Cardinality Categorical Features and Repeated Measures in Deep Neural Networks This is the working dire

QAConv Interpretable and Generalizable Person Re-Identification with Query-Adaptive Convolution and Temporal Lifting This PyTorch code is proposed in

Adversarial Attacks on Graph Classification via Bayesian Optimisation @ NeurIPS 2021 This repository contains the official implementation of GRABNEL,

Discovering Dynamic Salient Regions with Spatio-Temporal Graph Neural Networks This is the official code for DyReg model inroduced in Discovering Dyna

Realistic evaluation of transductive few-shot learning Introduction This repo contains the code for our NeurIPS 2021 submitted paper "Realistic evalua

Probabilistic Tensor Decomposition of Neural Population Spiking Activity Matlab (recommended) and Python (in developement) implementations of Soulat e

On Memorization in Probabilistic Deep Generative Models This repository contains the code necessary to reproduce the experiments in On Memorization in

Graph Neural Topic Model (GNTM) This is the pytorch implementation of the paper "Topic Modeling Revisited: A Document Graph-based Neural Network Persp

PyTCI A toolbox that estimates the integration window of a sensory response using the "Temporal Context Invariance" paradigm (TCI). The TCI method Int

Deep Latent Force Models This repository contains a PyTorch implementation of the deep latent force model (DLFM), presented in the paper, Compositiona

Graph Augmentation Graph augmentation/self-supervision/etc. Algorithms gcn gcn+virtual node gin gin+virtual node PNA GraphTrans Augmentation methods N

Deep Markov Factor Analysis (DMFA) Codes and experiments for deep Markov factor analysis (DMFA) model accepted for publication at NeurIPS2021: A. Farn

ReFine: Multi-Grained Explainability for GNNs We are trying hard to update the code, but it may take a while to complete due to our tight schedule rec

EIGNN: Efficient Infinite-Depth Graph Neural Networks The official implementation of EIGNN: Efficient Infinite-Depth Graph Neural Networks (NeurIPS 20

Directed Graph Contrastive Learning Paper | Poster | Supplementary The PyTorch implementation of Directed Graph Contrastive Learning (DiGCL). In this

Configurations Change HOME_PATH in CONFIG.py as the current path Data Prepare CENSINCOME Download data Put census-income.data and census-income.test i

Online Learning Of Neural Computations From Sparse Temporal Feedback This repository is the official implementation of the NeurIPS 2021 paper Online L

Repository under construction. Example dataset, checkpoints, and training/testing scripts will be avaible soon! 💡 Collated best practices from most p

A Flow-based latent state generative model of neural population responses to natural images Code for "A Flow-based latent state generative model of ne

LMPBT Supplementary code for the Paper entitled ``Locally Most Powerful Bayesian Test for Out-of-Distribution Detection using Deep Generative Models"

NAC Official PyTorch implementation of NAC from the paper: Neural Auto-Curricula in Two-Player Zero-Sum Games. We release code for: Gradient based ora

Equi-RC Equivariant layers for RC-complement symmetry in DNA sequence data This is a repository that implements the layers as described in "Reverse-Co

StyleGAN-NADA: CLIP-Guided Domain Adaptation of Image Generators [Project Website] [Replicate.ai Project] StyleGAN-NADA: CLIP-Guided Domain Adaptation

Encoding in Style: a StyleGAN Encoder for Image-to-Image Translation We present a generic image-to-image translation framework, pixel2style2pixel (pSp

lpips-pytorch Description Developing perceptual distance metrics is a major topic in recent image processing problems. LPIPS[1] is a state-of-the-art

NEURAL is the premiere CLI jockey replacement full stack web/app/database network automation application, providing a "no-code" web app for network engineers developed by a network engineer!

ML-Decoder: Scalable and Versatile Classification Head Paper Official PyTorch Implementation Tal Ridnik, Gilad Sharir, Avi Ben-Cohen, Emanuel Ben-Baru

Introduction This repository is the official PyTorch implementation of Data-free Knowledge Distillation for Object Detection, WACV 2021. Data-free Kno

This repository provides the official implementation of "Robust channel-wise illumination estimation." accepted in BMVC (2021).

Large-scale pre-trained language models (PLMs) such as BERT and GPT have achieved great success and become a milestone in NLP.

Network, Service & Security Observability for Kubernetes What is Hubble? Getting Started Features Service Dependency Graph Metrics & Monitoring Flow V

A benchmark for stateful fuzzing of network protocols

PyDGN Wiki Description This is a Python library to easily experiment with Deep Graph Networks (DGNs). It provides automatic management of data splitti

Artificial Neural Network This repository contain implementation of Artificial Neural Network Algorithm in several programming languanges and framewor

Short Text Mining in Python Introduction This package shorttext is a Python package that facilitates supervised and unsupervised learning for short te

OpenL3 OpenL3 is an open-source Python library for computing deep audio and image embeddings. Please refer to the documentation for detailed instructi

Backbone for PyTorch training loop Will try to keep it minimalistic. pip install back from back import Bone Features Progress bar Checkpoints saving/l