Python Biomedical-applications Resources

NeurIPS 2020 SEVIR Code for paper: SEVIR : A Storm Event Imagery Dataset for Deep Learning Applications in Radar and Satellite Meteorology Requirement

Gunicorn Gunicorn 'Green Unicorn' is a Python WSGI HTTP Server for UNIX. It's a pre-fork worker model ported from Ruby's Unicorn project. The Gunicorn

dlib C++ library Dlib is a modern C++ toolkit containing machine learning algorithms and tools for creating complex software in C++ to solve real worl

RapidSMS RapidSMS is a free and open source framework for building interactive SMS applications, which integrates tightly with Django to provide a ric

Pyctuator Monitor Python web apps using Spring Boot Admin. Pyctuator supports Flask, FastAPI, aiohttp and Tornado. Django support is planned as well.

fastapi-versioning api versioning for fastapi web applications Installation pip install fastapi-versioning Examples from fastapi import FastAPI from f

aioprometheus aioprometheus is a Prometheus Python client library for asyncio-based applications. It provides metrics collection and serving capabilit

pytest-flask An extension of pytest test runner which provides a set of useful tools to simplify testing and development of the Flask extensions and a

Authomatic Authomatic is a framework agnostic library for Python web applications with a minimalistic but powerful interface which simplifies authenti

Supported tags and respective Dockerfile links python3.8, latest (Dockerfile) python3.7, (Dockerfile) python3.6 (Dockerfile) python3.8-slim (Dockerfil

This repository contains custom pipes and models related to using spaCy for scientific documents. In particular, there is a custom tokenizer that adds

PyQtGraph A pure-Python graphics library for PyQt5/PyQt6/PySide2/PySide6 Copyright 2020 Luke Campagnola, University of North Carolina at Chapel Hill h

A Python library for audio feature extraction, classification, segmentation and applications This doc contains general info. Click here for the comple

Summary Pyroomacoustics is a software package aimed at the rapid development and testing of audio array processing algorithms. The content of the pack

Flask-SocketIO Socket.IO integration for Flask applications. Installation You can install this package as usual with pip: pip install flask-socketio

Authomatic Authomatic is a framework agnostic library for Python web applications with a minimalistic but powerful interface which simplifies authenti

Note This project is non maintained anymore. Consider the Flask-Security-Too project as an alternative. Flask-Security It quickly adds security featur

msgpack-asgi msgpack-asgi allows you to add automatic MessagePack content negotiation to ASGI applications (Starlette, FastAPI, Quart, etc.), with a s

fastapi-versioning api versioning for fastapi web applications Installation pip install fastapi-versioning Examples from fastapi import FastAPI from f

re-wx is a library for building modern declarative desktop applications. It's built as a management layer on top of WXPython, which means you get all the goodness of a mature, native, cross-platform UI kit, wrapped up in a modern, React inspired API.

EasyROI Helper library for drawing ROI in Computer Vision Applications Table of Contents EasyROI Table of Contents About The Project Tech Stack File S

Table of Contents About Installation Usage Help About Xpra is known as "screen for X" : its seamless mode allows you to run X11 programs, usually on a

This repository contains custom pipes and models related to using spaCy for scientific documents. In particular, there is a custom tokenizer that adds

PyQtGraph A pure-Python graphics library for PyQt5/PyQt6/PySide2/PySide6 Copyright 2020 Luke Campagnola, University of North Carolina at Chapel Hill h

dlib C++ library Dlib is a modern C++ toolkit containing machine learning algorithms and tools for creating complex software in C++ to solve real worl

Note This project is non maintained anymore. Consider the Flask-Security-Too project as an alternative. Flask-Security It quickly adds security featur

Flask-RQ RQ (Redis Queue) integration for Flask applications Resources Documentation Issue Tracker Code Development Version Installation $ pip install

Flask-SocketIO Socket.IO integration for Flask applications. Installation You can install this package as usual with pip: pip install flask-socketio

Yappi Yet Another Python Profiler, but this time thread&coroutine&greenlet aware. Highlights Fast: Yappi is fast. It is completely written in C and lo

Pynsist is a tool to build Windows installers for your Python applications. The installers bundle Python itself, so you can distribute your applicatio

pipx — Install and Run Python Applications in Isolated Environments Documentation: https://pipxproject.github.io/pipx/ Source Code: https://github.com

This project is no longer maintained March 2020 Update: Please go see the amazing Pysa tutorial that should get you up to speed finding security vulne

pylint-flask About pylint-flask is Pylint plugin for improving code analysis when editing code using Flask. Inspired by pylint-django. Problems pylint

DEPOT - File Storage Made Easy DEPOT is a framework for easily storing and serving files in web applications on Python2.6+ and Python3.2+. DEPOT suppo

Py2neo Py2neo is a client library and toolkit for working with Neo4j from within Python applications and from the command line. The library supports b

Prometheus Python Client The official Python 2 and 3 client for Prometheus. Three Step Demo One: Install the client: pip install prometheus-client Tw

Python Prompt Toolkit prompt_toolkit is a library for building powerful interactive command line applications in Python. Read the documentation on rea

Docker Compose Docker Compose is a tool for running multi-container applications on Docker defined using the Compose file format. A Compose file is us

fastapi-versioning api versioning for fastapi web applications Installation pip install fastapi-versioning Examples from fastapi import FastAPI from f

Note This project is non maintained anymore. Consider the Flask-Security-Too project as an alternative. Flask-Security It quickly adds security featur

Flask-Migrate Flask-Migrate is an extension that handles SQLAlchemy database migrations for Flask applications using Alembic. The database operations

Prometheus Flask exporter This library provides HTTP request metrics to export into Prometheus. It can also track method invocations using convenient

Prometheus Python Client The official Python 2 and 3 client for Prometheus. Three Step Demo One: Install the client: pip install prometheus-client Tw

Huxley Watches you browse, takes screenshots, tells you when they change Huxley is a test-like system for catching visual regressions in Web applicati

async-asgi-testclient Async ASGI TestClient is a library for testing web applications that implements ASGI specification (version 2 and 3). The motiva

Schemathesis Schemathesis is a modern API testing tool for web applications built with Open API and GraphQL specifications. It reads the application s

Flask Debug-toolbar This is a port of the excellent django-debug-toolbar for Flask applications. Installation Installing is simple with pip: $ pip ins

pytest-flask An extension of pytest test runner which provides a set of useful tools to simplify testing and development of the Flask extensions and a

splinter - python tool for testing web applications splinter is an open source tool for testing web applications using Python. It lets you automate br

Flask-SocketIO Socket.IO integration for Flask applications. Installation You can install this package as usual with pip: pip install flask-socketio

Velruse is a set of authentication routines that provide a unified way to have a website user authenticate to a variety of different identity provider

Authomatic Authomatic is a framework agnostic library for Python web applications with a minimalistic but powerful interface which simplifies authenti

Gunicorn Gunicorn 'Green Unicorn' is a Python WSGI HTTP Server for UNIX. It's a pre-fork worker model ported from Ruby's Unicorn project. The Gunicorn

Readme web2py is a free open source full-stack framework for rapid development of fast, scalable, secure and portable database-driven web-based applic

Bottle: Python Web Framework Bottle is a fast, simple and lightweight WSGI micro web-framework for Python. It is distributed as a single file module a

Flask Flask is a lightweight WSGI web application framework. It is designed to make getting started quick and easy, with the ability to scale up to co

BigBitBus KAT Components Click on the diagram to enlarge, or follow this link for detailed documentation Introduction Welcome to the BigBitBus Kuberne

gtn_applications An applications library using GTN. Current examples include: Offline handwriting recognition Automatic speech recognition Installing

slack-event-subscriptions About The Project Do you want to get simple attendance checks? If you are using Slack, participants can just react on a spec

splinter - python tool for testing web applications splinter is an open source tool for testing web applications using Python. It lets you automate br

Schemathesis Schemathesis is a modern API testing tool for web applications built with Open API and GraphQL specifications. It reads the application s

splinter - python tool for testing web applications splinter is an open source tool for testing web applications using Python. It lets you automate br

Schemathesis Schemathesis is a modern API testing tool for web applications built with Open API and GraphQL specifications. It reads the application s

PyQtGraph A pure-Python graphics library for PyQt5/PyQt6/PySide2/PySide6 Copyright 2020 Luke Campagnola, University of North Carolina at Chapel Hill h

README: python-timbl Authors: Sander Canisius, Maarten van Gompel Contact: [email protected] Web site: https://github.com/proycon/python-timbl/ pytho

pyglet pyglet is a cross-platform windowing and multimedia library for Python, intended for developing games and other visually rich applications. It

Ray provides a simple, universal API for building distributed applications. Ray is packaged with the following libraries for accelerating machine lear

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Ansible Ansible is a radically simple IT automation system. It handles configuration management, application deployment, cloud provisioning, ad-hoc ta

Flask Debug-toolbar This is a port of the excellent django-debug-toolbar for Flask applications. Installation Installing is simple with pip: $ pip ins

Overview docs tests package Manhole is in-process service that will accept unix domain socket connections and present the stacktraces for all threads

A framework for elegantly configuring complex applications. Check the website for more information. Releases Stable Hydra 1.0 is the stable version of

Welcome to django-allauth! Integrated set of Django applications addressing authentication, registration, account management as well as 3rd party (soc

A Python library for audio feature extraction, classification, segmentation and applications This doc contains general info. Click here for the comple