Python Endpoint-analysis Resources

SARS-CoV-2 processing requests Request execution of Galaxy SARS-CoV-2 variation analysis workflows on input data you provide. Prerequisites This autom

PyKale is a PyTorch library for multimodal learning and transfer learning as well as deep learning and dimensionality reduction on graphs, images, texts, and videos. By adopting a unified pipeline-based API design, PyKale enforces standardization and minimalism, via reusing existing resources, reducing repetitions and redundancy, and recycling learning models across areas.

Repository on the collaborative IVADO medical imaging project between the Mila and NeuroPoly labs.

OCTIS : Optimizing and Comparing Topic Models is Simple! OCTIS (Optimizing and Comparing Topic models Is Simple) aims at training, analyzing and compa

ForgeryNet: A Versatile Benchmark for Comprehensive Forgery Analysis ForgeryNet: A Versatile Benchmark for Comprehensive Forgery Analysis [arxiv|pdf|v

TTS is a library for advanced Text-to-Speech generation. It's built on the latest research, was designed to achieve the best trade-off among ease-of-training, speed and quality. TTS comes with pretrained models, tools for measuring dataset quality and already used in 20+ languages for products and research projects.

DomainCAT (Domain Connectivity Analysis Tool) Domain Connectivity Analysis Tool is used to analyze aggregate connectivity patterns across a set of dom

Py-FEAT is a suite for facial expressions (FEX) research written in Python. This package includes tools to detect faces, extract emotional facial expressions (e.g., happiness, sadness, anger), facial muscle movements (e.g., action units), and facial landmarks, from videos and images of faces, as well as methods to preprocess, analyze, and visualize FEX data.

This open source Python library provide several solvers for optimization problems related to Optimal Transport for signal, image processing and machine learning.

Automated Penetration Testing Framework

bulbea "Deep Learning based Python Library for Stock Market Prediction and Modelling." Table of Contents Installation Usage Documentation Dependencies

geoplot: geospatial data visualization geoplot is a high-level Python geospatial plotting library. It's an extension to cartopy and matplotlib which m

🌍 xarray-spatial: Raster-Based Spatial Analysis in Python 📍 Fast, Accurate Python library for Raster Operations ⚡ Extensible with Numba ⏩ Scalable w

MovingPandas MovingPandas implements a Trajectory class and corresponding methods based on GeoPandas. Visit movingpandas.org for details! You can run

Welcome to the lidar package lidar is Python package for delineating the nested hierarchy of surface depressions in digital elevation models (DEMs). I

thunder scalable analysis of image and time series analysis in python Thunder is an ecosystem of tools for the analysis of image and time series data

peartree 🍐 🌳 peartree is a library for converting GTFS feed schedules into a representative directed network graph. The tool uses Partridge to conve

Pandana Pandana is a Python library for network analysis that uses contraction hierarchies to calculate super-fast travel accessibility metrics and sh

OSMnx OSMnx is a Python package that lets you download geospatial data from OpenStreetMap and model, project, visualize, and analyze real-world street

Lifelong Machine Learning with Deep Streaming Linear Discriminant Analysis This is a PyTorch implementation of the Deep Streaming Linear Discriminant

Python script that analyses news headline or body sentiment and returns the overall media sentiment of any given coin. It can take multiple coins an

A Python Library for Document Layout Understanding

Apache Superset is a Data Visualization and Data Exploration Platform

StyleSpace Analysis: Disentangled Controls for StyleGAN Image Generation Demo video: CVPR 2021 Oral: Single Channel Manipulation: Localized or attribu

NetworkX is a Python package for the creation, manipulation, and study of the structure, dynamics, and functions of complex networks.

Neural-Semi-supervised-Learning-for-Text-Classification-Under-Large-Scale-Pretraining Code, models and Datasets for《Neural Semi-supervised Learning fo

wsss-analysis The code of: A Comprehensive Analysis of Weakly-Supervised Semantic Segmentation in Different Image Domains, arXiv pre-print 2019 paper.

Flenser Have you ever been handed a dataset you've never seen before? Flenser is a simple, minimal, automated exploratory data analysis tool. It runs

Socorro Socorro is a Mozilla-centric ingestion pipeline and analysis tools for crash reports using the Breakpad libraries. Support This is a Mozilla-s

Sensitivity Analysis Library (SALib) Python implementations of commonly used sensitivity analysis methods. Useful in systems modeling to calculate the

TensorFlow Probability TensorFlow Probability is a library for probabilistic reasoning and statistical analysis in TensorFlow. As part of the TensorFl

dabl The data analysis baseline library. "Mr Sanchez, are you a data scientist?" "I dabl, Mr president." Find more information on the website. State o

Scikit-TDA is a home for Topological Data Analysis Python libraries intended for non-topologists. This project aims to provide a curated library of TD

Mlxtend (machine learning extensions) is a Python library of useful tools for the day-to-day data science tasks. Sebastian Raschka 2014-2021 Links Doc

imbalanced-learn imbalanced-learn is a python package offering a number of re-sampling techniques commonly used in datasets showing strong between-cla

PyTorch Implementation of Differentiable SDE Solvers This library provides stochastic differential equation (SDE) solvers with GPU support and efficie

Automated Time Series Models in Python (AtsPy) SSRN Report Easily develop state of the art time series models to forecast univariate data series. Simp

Auto_TS: Auto_TimeSeries Automatically build multiple Time Series models using a Single Line of Code. Now updated with Dask. Auto_timeseries is a comp

matrixprofile-ts matrixprofile-ts is a Python 2 and 3 library for evaluating time series data using the Matrix Profile algorithms developed by the Keo

pyts: a Python package for time series classification pyts is a Python package for time series classification. It aims to make time series classificat

STUMPY STUMPY is a powerful and scalable library that efficiently computes something called the matrix profile, which can be used for a variety of tim

tslearn The machine learning toolkit for time series analysis in Python Section Description Installation Installing the dependencies and tslearn Getti

pmdarima Pmdarima (originally pyramid-arima, for the anagram of 'py' + 'arima') is a statistical library designed to fill the void in Python's time se

Welcome to sktime A unified framework for machine learning with time series We provide specialized time series algorithms and scikit-learn compatible

Surpriver - Find High Moving Stocks before they Move Find high moving stocks before they move using anomaly detection and machine learning. Surpriver

FinTA (Financial Technical Analysis) Common financial technical indicators implemented in Pandas. This is work in progress, bugs are expected and resu

CryptoSignal - #1 Quant Trading & Technical Analysis Bot - 2,100 + stars, 580 + forks https://github.com/CryptoSignal/Crypto-Signal Development state:

Alphalens Alphalens is a Python Library for performance analysis of predictive (alpha) stock factors. Alphalens works great with the Zipline open sour

Technical Analysis Library in Python It is a Technical Analysis library useful to do feature engineering from financial time series datasets (Open, Cl

Python Spatial Analysis Library PySAL, the Python spatial analysis library, is an open source cross-platform library for geospatial data science with

ArcGIS API for Python ArcGIS API for Python is a Python library for working with maps and geospatial data, powered by web GIS. It provides simple and

Shapely Manipulation and analysis of geometric objects in the Cartesian plane. Shapely is a BSD-licensed Python package for manipulation and analysis

ID Verification by LibraX.ai This is the first free Identity verification in the market. LibraX.ai is an identity verification platform for developers

Open Semantic Search https://opensemanticsearch.org Integrated search server, ETL framework for document processing (crawling, text extraction, text a

ocropy OCRopus is a collection of document analysis programs, not a turn-key OCR system. In order to apply it to your documents, you may need to do so

SCUT-CTW1500 Datasets We have updated annotations for both train and test set. Train: 1000 images [images][annos] Additional point annotation for each

Eynollah Document Layout Analysis Introduction This tool performs document layout analysis (segmentation) from image data and returns the results as P

OCR Segmentation a deep learning model for page layout analysis / segmentation. dependencies tensorflow1.8 python3 dataset: uw3-framed-lines-degraded-

LayoutAnalysisEvaluator Layout Analysis Evaluator for: ICDAR 2019 Historical Document Reading Challenge on Large Structured Chinese Family Records ICD

ocroseg This is a deep learning model for page layout analysis / segmentation. There are many different ways in which you can train and run it, but by

P2PaLA Page to PAGE Layout Analysis (P2PaLA) is a toolkit for Document Layout Analysis based on Neural Networks. 💥 Try our new DEMO for online baseli

Run the application: python main.py *Note: For first time running the application, create a folder named "output". The application is a simple documen

Layout_Analysis Introduction This is an implementation of RLSA and X-Y Cut with OpenCV Dependencies OpenCV 3.0+ How to use Compile with g++ : g++ -std

Deep Learning Based Page Layout Analyze This is a Python implementaion of page layout analyze tool. The goal of page layout analyze is to segment page

LAREX LAREX is a semi-automatic open-source tool for layout analysis on early printed books. It uses a rule based connected components approach which

Kalman Filter in Python This is a basic example of how Kalman filter works in Python. I do plan on refactoring and expanding this repo in the future.

Negative Sampling for NER Unlabeled entity problem is prevalent in many NER scenarios (e.g., weakly supervised NER). Our paper in ICLR-2021 proposes u

IIM - Crowd Localization This repo is the official implementation of paper: Learning Independent Instance Maps for Crowd Localization. The code is dev

TTNet-Pytorch The implementation for the paper "TTNet: Real-time temporal and spatial video analysis of table tennis" An introduction of the project c

SpiderFoot is an open source intelligence (OSINT) automation tool. It integrates with just about every data source available and utilises a range of m

Cowrie Welcome to the Cowrie GitHub repository This is the official repository for the Cowrie SSH and Telnet Honeypot effort. What is Cowrie Cowrie is

Trafalgar Python library to make development of portfolio analysis faster and easier Installation 🔥 For the moment, Trafalgar is still in beta develo

sentello Sentello is a python script that simulates the anti-evasion and anti-analysis techniques used by malware. For techniques that are difficult t

Alphalens Alphalens is a Python Library for performance analysis of predictive (alpha) stock factors. Alphalens works great with the Zipline open sour

scikit-posthocs is a Python package that provides post hoc tests for pairwise multiple comparisons that are usually performed in statistical data anal

Pandas Profiling Documentation | Slack | Stack Overflow Generates profile reports from a pandas DataFrame. The pandas df.describe() function is great

pandas_summary An extension to pandas dataframes describe function. The module contains DataFrameSummary object that extend describe() with: propertie

madmom Madmom is an audio signal processing library written in Python with a strong focus on music information retrieval (MIR) tasks. The library is i

Welcome to MARSYAS. MARSYAS is a software framework for rapid prototyping of audio applications, with flexibility and extensibility as primary concer

Essentia Essentia is an open-source C++ library for audio analysis and audio-based music information retrieval released under the Affero GPL license.

aubio aubio is a library to label music and sounds. It listens to audio signals and attempts to detect events. For instance, when a drum is hit, at wh

POT: Python Optimal Transport This open source Python library provide several solvers for optimization problems related to Optimal Transport for signa

emcee The Python ensemble sampling toolkit for affine-invariant MCMC emcee is a stable, well tested Python implementation of the affine-invariant ense

dovpanda Directions OVer PANDAs Directions are hints and tips for using pandas in an analysis environment. dovpanda is an overlay companion for workin

datatable This is a Python package for manipulating 2-dimensional tabular data structures (aka data frames). It is close in spirit to pandas or SFrame

XPandas (extended Pandas) implements 1D and 2D data containers for storing type-heterogeneous tabular data of any type, and encapsulates feature extra

Pandas Profiling Documentation | Slack | Stack Overflow Generates profile reports from a pandas DataFrame. The pandas df.describe() function is great

TensorFlow Model Analysis TensorFlow Model Analysis (TFMA) is a library for evaluating TensorFlow models. It allows users to evaluate their models on

Yellowbrick Visual analysis and diagnostic tools to facilitate machine learning model selection. What is Yellowbrick? Yellowbrick is a suite of visual

imbalanced-learn imbalanced-learn is a python package offering a number of re-sampling techniques commonly used in datasets showing strong between-cla

Time series analysis today is an important cornerstone of quantitative science in many disciplines, including natural and life sciences as well as eco

tslearn The machine learning toolkit for time series analysis in Python Section Description Installation Installing the dependencies and tslearn Getti

[Due to the time taken @ uni, work + hell breaking loose in my life, since things have calmed down a bit, will continue commiting!!!] [By the way, I'm

Mlxtend (machine learning extensions) is a Python library of useful tools for the day-to-day data science tasks. Sebastian Raschka 2014-2021 Links Doc

dlib C++ library Dlib is a modern C++ toolkit containing machine learning algorithms and tools for creating complex software in C++ to solve real worl

What is xLearn? xLearn is a high performance, easy-to-use, and scalable machine learning package that contains linear model (LR), factorization machin

Orange Data Mining Orange is a data mining and visualization toolbox for novice and expert alike. To explore data with Orange, one requires no program

Table of contents What is PEM? Overview Installation Usage Executable Library Telegram Bot Try OPEM in Your Browser! MATLAB Issues & Bug Reports Contr

MOSAIC: A modular single-molecule analysis interface MOSAIC is a single molecule analysis toolbox that automatically decodes multi-state nanopore data

CellProfiler is a free open-source software designed to enable biologists without training in computer vision or programming to quantitatively measure