Python Medical-time-series Resources

MemStream Implementation of MemStream: Memory-Based Anomaly Detection in Multi-Aspect Streams with Concept Drift . Siddharth Bhatia, Arjit Jain, Shivi

Another Scheduler Another Scheduler is a Kubernetes controller that automatically starts, stops, or restarts pods from a deployment at a specified tim

Time Series Research with Torch 这个开源项目主要是对经典的时间序列预测算法论文进行复现，模型主要参考自GluonTS，框架主要参考自Informer。 建立原因 相较于mxnet和TF，Torch框架中的神经网络层需要提前指定输入维度： # 建立线性层 TensorF

domhttpx is a google search engine dorker with HTTP toolkit built with python, can make it easier for you to find many URLs/IPs at once with fast time

Posture: Pose Tracking and Machine Learning for prescribing corrective suggestions to improve posture and form while exercising. This repository conta

Dual Self-Attention Network for Multivariate Time Series Forecasting 20.10.26 Update: Due to the difficulty of installation and code maintenance cause

Real-time RGBD-based Extended Body Pose Estimation This repository is a real-time demo for our paper that was published at WACV 2021 conference The ou

TS2Vec This repository contains the official implementation for the paper Learning Timestamp-Level Representations for Time Series with Hierarchical C

ARTIF is a new advanced real time threat intelligence framework built that adds another abstraction layer on the top of MISP to identify threats and malicious web traffic on the basis of IP reputation and historical data. It also performs automatic enrichment and threat scoring by collecting, processing and correlating observables based on different factors.

chia-rosechain 一个无耻的小活动 | A shameless little event 如果您喜欢这个项目，请点击star 将赠送您520朵玫瑰，可以去 facebook 留下您的(xcr)地址，和github用户名。 If you like this project, please

PyMedPhys is an open-source Medical Physics python library built by an open community that values and prioritises code sharing, review, improvement, and learning from each other. I

A data preprocessing package for time series data. Design for machine learning and deep learning.

Swin-Unet The codes for the work "Swin-Unet: Unet-like Pure Transformer for Medical Image Segmentation"(https://arxiv.org/abs/2105.05537). A validatio

What is nnDetection? Simultaneous localisation and categorization of objects in medical images, also referred to as medical object detection, is of hi

Soft DTW Loss Function for PyTorch in CUDA This is a Pytorch Implementation of Soft-DTW: a Differentiable Loss Function for Time-Series which is batch

pysesame3 Unofficial Python Library to communicate with SESAME 3 series products from CANDY HOUSE, Inc. This project aims to control SESAME 3 series d

This is a multi-app executor that it used when we have some different task in a our applications and want to run them at the same time. It uses SQLAlchemy for ORM and Alembic for database migrations.

OrienMask This repository implements the framework OrienMask for real-time instance segmentation. It achieves 34.8 mask AP on COCO test-dev at the spe

Developed an AI-based system to control the mouse cursor using Python and OpenCV with the real-time camera. Fingertip location is mapped to RGB images to control the mouse cursor.

tsflex is a toolkit for flexible time-series processing & feature extraction, making few assumptions about input data. Useful links Documentation Exam

A python library for easy manipulation and forecasting of time series.

Komi San wants you to study This repo contains the source code for our bot that manages time and other functions of the server 3 Features Your study

kafkaml-anomaly-detection Project for real time anomaly detection using kafka and python It's assumed that zookeeper and kafka are running in the loca

spafe aims to simplify features extractions from mono audio files. The library can extract of the following features: BFCC, LFCC, LPC, LPCC, MFCC, IMFCC, MSRCC, NGCC, PNCC, PSRCC, PLP, RPLP, Frequency-stats etc. It also provides various filterbank modules (Mel, Bark and Gammatone filterbanks) and other spectral statistics.

Kats, a kit to analyze time series data, a lightweight, easy-to-use, generalizable, and extendable framework to perform time series analysis, from understanding the key statistics and characteristics, detecting change points and anomalies, to forecasting future trends.

Smoking Simulation is an app to simulate the spreading of smokers and non-smokers, their interactions and population during certain

UmlsBERT: Clinical Domain Knowledge Augmentation of Contextual Embeddings Using the Unified Medical Language System Metathesaurus General info This is

Habitat: A Runtime-Based Computational Performance Predictor for Deep Neural Network Training Habitat is a tool that predicts a deep neural network's

github-follow-unfollow-bot This is a Python script for Github Bot which uses Selenium to Automate things. Pre-requisites :- Python A Github Account Re

View and control terminals from your browser with end-to-end encryption 🔒

Lazy, a tool for running things in idle time Mostly used to stop CUDA ML model training from making my desktop unusable. Simply monitors keyboard/mous

FANet Real-time Semantic Segmentation with Fast Attention Ping Hu, Federico Perazzi, Fabian Caba Heilbron, Oliver Wang, Zhe Lin, Kate Saenko , Stan Sc

Semi Hand-Object Semi-Supervised 3D Hand-Object Poses Estimation with Interactions in Time (CVPR 2021).

T-LOAM: Truncated Least Squares Lidar-only Odometry and Mapping in Real-Time The first Lidar-only odometry framework with high performance based on tr

STCN Rethinking Space-Time Networks with Improved Memory Coverage for Efficient Video Object Segmentation Ho Kei Cheng, Yu-Wing Tai, Chi-Keung Tang [a

Audio augmentations library for PyTorch for audio in the time-domain, with support for stochastic data augmentations as used often in self-supervised / contrastive learning.

M-LSD: Towards Light-weight and Real-time Line Segment Detection Pytorch implementation of "M-LSD: Towards Light-weight and Real-time Line Segment Det

Aule Libere Polimi Since the PoliMi site no longer allows people to search for free classrooms this bot was necessary! It simply search for the classr

pyRTOS Introduction pyRTOS is a real-time operating system (RTOS), written in Python. The primary goal of pyRTOS is to provide a pure Python RTOS that

Granger causality discovery for neural networks.

M-LSD: Towards Light-weight and Real-time Line Segment Detection Official Tensorflow implementation of "M-LSD: Towards Light-weight and Real-time Line

A new kind of Progress Bar, with real time throughput, eta and very cool animations!

Clairvoyance: A Pipeline Toolkit for Medical Time Series Authors: van der Schaar Lab This repository contains implementations of Clairvoyance: A Pipel

FairMOT - A simple baseline for one-shot multi-object tracking

Medical Image Segmentation using Squeeze-and-Expansion Transformers Introduction This repository contains the code of the IJCAI'2021 paper 'Medical Im

TSForecasting This repository contains the implementations related to the experiments of a set of publicly available datasets that are used in the tim

MarkerPose: Robust real-time planar target tracking for accurate stereo pose estimation This is a PyTorch and LibTorch implementation of MarkerPose: a

neurodsp is a collection of approaches for applying digital signal processing to neural time series, including algorithms that have been proposed for the analysis of neural time series. It also includes simulation tools for generating plausible simulations of neural time series.

ConTNet Introduction ConTNet (Convlution-Tranformer Network) is proposed mainly in response to the following two issues: (1) ConvNets lack a large rec

Frozen️ in Time ❄️ ️️️️ ⏳ A Joint Video and Image Encoder for End-to-End Retrieval (arXiv) Repository to contain the code, models, data for end-to-end

Python Streaming Anomaly Detection (PySAD) PySAD is an open-source python framework for anomaly detection on streaming multivariate data. Documentatio

DroneCrowd Paper Detection, Tracking, and Counting Meets Drones in Crowds: A Benchmark. Introduction This paper proposes a space-time multi-scale atte

Time series Timeseries Deep Learning Pytorch fastai - State-of-the-art Deep Learning with Time Series and Sequences in Pytorch / fastai

PRAnCER (Platform enabling Rapid Annotation for Clinical Entity Recognition) is a web platform that enables the rapid annotation of medical terms within clinical notes. A user can highlight spans of text and quickly map them to concepts in large vocabularies within a single, intuitive platform.

ViT-V-Net: Vision Transformer for Volumetric Medical Image Registration keywords: vision transformer, convolutional neural networks, image registratio

This Repostory contains the pretrained DTLN-aec model for real-time acoustic echo cancellation.

A curated list of awesome anomaly detection works in medical imaging, inspired by the other awesome-* initiatives.

Reactor, a LiveView library for Django Reactor enables you to do something similar to Phoenix framework LiveView using Django Channels. What's in the

Reactor, a LiveView library for Django Reactor enables you to do something similar to Phoenix framework LiveView using Django Channels. What's in the

LiDARTag Overview This is a package for LiDARTag, described in paper: LiDARTag: A Real-Time Fiducial Tag System for Point Clouds (PDF)(arXiv). This wo

Invert and perturb GAN images for test-time ensembling

GAN Ensembling Project Page | Paper | Bibtex Ensembling with Deep Generative Views. Lucy Chai, Jun-Yan Zhu, Eli Shechtman, Phillip Isola, Richard Zhan

Graph Evolving Meta-Learning for Low-resource Medical Dialogue Generation Code to be further cleaned... This repo contains the code of the following p

Simple tool to track your crypto portfolio in realtime. It can be used to track any coin on the BNB network, even obscure coins that are not listed or trackable by major portfolio tracking applications.

FaceBlit: Instant Real-Time Example-Based Style Transfer to Facial Videos The official implementation of FaceBlit: Instant Real-Time Example-Based Sty

This is the official PyTorch implementation of TMNet in the CVPR 2021 paper "Temporal Modulation Network for Controllable Space-Time VideoSuper-Resolu

PyKale is a PyTorch library for multimodal learning and transfer learning as well as deep learning and dimensionality reduction on graphs, images, texts, and videos. By adopting a unified pipeline-based API design, PyKale enforces standardization and minimalism, via reusing existing resources, reducing repetitions and redundancy, and recycling learning models across areas.

Repository on the collaborative IVADO medical imaging project between the Mila and NeuroPoly labs.

WHENet: Real-time Fine-Grained Estimation for Wide Range Head Pose Yijun Zhou and James Gregson - BMVC2020 Abstract: We present an end-to-end head-pos

Training-code-of-STM This repository fully reproduces Space-Time Memory Networks Performance on Davis17 val set&Weights backbone training stage traini

⛺️ Tent: Fully Test-Time Adaptation by Entropy Minimization This is the official project repository for Tent: Fully-Test Time Adaptation by Entropy Mi

Table of Contents Introduction Architecture Configuring an Endpoint Creating a Amazon Chime Webhook URL Creating a Slack Webhook URL Creating a Micros

: We present a novel, real-time, semantic segmentation network in which the encoder both encodes and generates the parameters (weights) of the decoder. Furthermore, to allow maximal adaptivity, the weights at each decoder block vary spatially. For this purpose, we design a new type of hypernetwork, composed of a nested U-Net for drawing higher level context features

Trove Trove is a research framework for building weakly supervised (bio)medical named entity recognition (NER) and other entity attribute classifiers

TimeSformer This is an official pytorch implementation of Is Space-Time Attention All You Need for Video Understanding?. In this repository, we provid

WebRTC Camera Home Assistant custom component for viewing IP cameras RTSP stream in real time using WebRTC technology. Based on: Pion - pure Go implem

⚡ OPAL ⚡ Open Policy Administration Layer OPAL is an administration layer for Open Policy Agent (OPA), detecting changes to both policy and policy dat

sankee Visualize changes in classified time series data with interactive Sankey plots in Google Earth Engine Contents Description Installation Using P

Main repo for ECCV 2020 paper MatryODShka: Real-time 6DoF Video View Synthesis using Multi-Sphere Images. visual.cs.brown.edu/matryodshka

Welcome to MedicalTorch MedicalTorch is an open-source framework for PyTorch, implementing an extensive set of loaders, pre-processors and datasets fo

Stock Market Buy/Sell/Hold prediction Using convolutional Neural Network This repo is an attempt to implement the research paper titled "Algorithmic F

We are a group of like-minded people trying to make access to weather data in Python feel like a warm summer breeze, similar to other projects like rdwd for the R language, which originally drew our interest in this project.

Multidimensional LSTM BitCoin Time Series Using multidimensional LSTM neural networks to create a forecast for Bitcoin price. For notes around this co

...Minimizing the mean square error on future experience. - Richard S. Sutton BTGym Scalable event-driven RL-friendly backtesting library. Build on

geextract Google Earth Engine data extraction tool. Quickly obtain Landsat multispectral time-series for exploratory analysis and algorithm testing On

thunder scalable analysis of image and time series analysis in python Thunder is an ecosystem of tools for the analysis of image and time series data

Yet Another Timeseries Model (YATSM) master v0.6.x-maintenance Build Coverage Docs DOI | About Yet Another Timeseries Model (YATSM) is a Python packag

InfoPro-Pytorch The Information Propagation algorithm for training deep networks with local supervision. (ICLR 2021) Revisiting Locally Supervised Lea

CheXbert: Combining Automatic Labelers and Expert Annotations for Accurate Radiology Report Labeling Using BERT CheXbert is an accurate, automated dee

An open-source library of algorithms to analyse time series in GPU and CPU.

NeuralRecon: Real-Time Coherent 3D Reconstruction from Monocular Video Project Page | Paper NeuralRecon: Real-Time Coherent 3D Reconstruction from Mon

A collection of loss functions for medical image segmentation

Practical Machine Learning Workshop Series Practical Machine Learning for Quantitative Finance Post conference workshop at the WBS Spring Conference D

SASSnet Code for paper: Shape-aware Semi-supervised 3D Semantic Segmentation for Medical Images(MICCAI 2020) Our code is origin from UA-MT You can fin

Domain Generalization for Medical Imaging Classification with Linear Dependency Regularization The code release of paper 'Domain Generalization for Me

Spectral Temporal Graph Neural Network for Multivariate Time-series Forecasting This repository is the official implementation of Spectral Temporal Gr

STAM - Pytorch Implementation of STAM (Space Time Attention Model), yet another pure and simple SOTA attention model that bests all previous models in

Pytorch-toolbelt A pytorch-toolbelt is a Python library with a set of bells and whistles for PyTorch for fast R&D prototyping and Kaggle farming: What

PyDLM Welcome to pydlm, a flexible time series modeling library for python. This library is based on the Bayesian dynamic linear model (Harrison and W

Automated Time Series Models in Python (AtsPy) SSRN Report Easily develop state of the art time series models to forecast univariate data series. Simp