Python Medical-time-series Resources

Anomaly Detection Toolkit (ADTK) Anomaly Detection Toolkit (ADTK) is a Python package for unsupervised / rule-based time series anomaly detection. As

Auto_TS: Auto_TimeSeries Automatically build multiple Time Series models using a Single Line of Code. Now updated with Dask. Auto_timeseries is a comp

matrixprofile-ts matrixprofile-ts is a Python 2 and 3 library for evaluating time series data using the Matrix Profile algorithms developed by the Keo

seglearn Seglearn is a python package for machine learning time series or sequences. It provides an integrated pipeline for segmentation, feature extr

Our article on Towards Data Science introduces the package and provides background information. Pytorch Forecasting aims to ease state-of-the-art time

pyts: a Python package for time series classification pyts is a Python package for time series classification. It aims to make time series classificat

STUMPY STUMPY is a powerful and scalable library that efficiently computes something called the matrix profile, which can be used for a variety of tim

Time Series Made Easy in Python darts is a python library for easy manipulation and forecasting of time series. It contains a variety of models, from

GluonTS - Probabilistic Time Series Modeling in Python GluonTS is a Python toolkit for probabilistic time series modeling, built around Apache MXNet (

Streamz Streamz helps you build pipelines to manage continuous streams of data. It is simple to use in simple cases, but also supports complex pipelin

tslearn The machine learning toolkit for time series analysis in Python Section Description Installation Installing the dependencies and tslearn Getti

pmdarima Pmdarima (originally pyramid-arima, for the anagram of 'py' + 'arima') is a statistical library designed to fill the void in Python's time se

Welcome to sktime A unified framework for machine learning with time series We provide specialized time series algorithms and scikit-learn compatible

tsfresh This repository contains the TSFRESH python package. The abbreviation stands for "Time Series Feature extraction based on scalable hypothesis

arch Autoregressive Conditional Heteroskedasticity (ARCH) and other tools for financial econometrics, written in Python (with Cython and/or Numba used

Technical Analysis Library in Python It is a Technical Analysis library useful to do feature engineering from financial time series datasets (Open, Cl

Schrodinger Well Python Python solver for timeless Schrodinger equation for well with arbitrary shape https://imgur.com/a/jlhK7OZ Pictures of circular

NeX: Real-time View Synthesis with Neural Basis Expansion Project Page | Video | Paper | COLAB | Shiny Dataset We present NeX, a new approach to novel

NeX: Real-time View Synthesis with Neural Basis Expansion Project Page | Video | Paper | COLAB | Shiny Dataset We present NeX, a new approach to novel

FedDG: Federated Domain Generalization on Medical Image Segmentation via Episodic Learning in Continuous Frequency Space by Quande Liu, Cheng Chen, Ji

Real-time-Scene-Text-Detection-and-Recognition-System End-to-end pipeline for real-time scene text detection and recognition. The detection model use

AntroPy is a Python 3 package providing several time-efficient algorithms for computing the complexity of time-series. It can be used for example to e

MaskCam MaskCam is a prototype reference design for a Jetson Nano-based smart camera system that measures crowd face mask usage in real-time, with all

TTNet-Pytorch The implementation for the paper "TTNet: Real-time temporal and spatial video analysis of table tennis" An introduction of the project c

🤪 TensorFlowTTS provides real-time state-of-the-art speech synthesis architectures such as Tacotron-2, Melgan, Multiband-Melgan, FastSpeech, FastSpeech2 based-on TensorFlow 2. With Tensorflow 2, we can speed-up training/inference progress, optimizer further by using fake-quantize aware and pruning, make TTS models can be run faster than real-time and be able to deploy on mobile devices or embedded systems.

Neural Spatio-Temporal Point Processes [arxiv] Ricky T. Q. Chen, Brandon Amos, Maximilian Nickel Abstract. We propose a new class of parameterizations

The Recon-ng Framework Recon-ng content now available on Pluralsight! Recon-ng is a full-featured reconnaissance framework designed with the goal of p

Welcome to HubbleStack!! You can find the docs here You can file an issue here Follow us on Twitter! Development Below are sample instructions to setu

CoTr: Efficient 3D Medical Image Segmentation by bridging CNN and Transformer This is the official pytorch implementation of the CoTr: Paper: CoTr: Ef

tsfresh This repository contains the TSFRESH python package. The abbreviation stands for "Time Series Feature extraction based on scalable hypothesis

swifter A package which efficiently applies any function to a pandas dataframe or series in the fastest available manner. Blog posts Release 1.0.0 Fir

Arctic TimeSeries and Tick store Arctic is a high performance datastore for numeric data. It supports Pandas, numpy arrays and pickled objects out-of-

Maya: Datetimes for Humans™ Datetimes are very frustrating to work with in Python, especially when dealing with different locales on different systems

Time series analysis today is an important cornerstone of quantitative science in many disciplines, including natural and life sciences as well as eco

PyFlux PyFlux is an open source time series library for Python. The library has a good array of modern time series models, as well as a flexible array

Prophet: Automatic Forecasting Procedure Prophet is a procedure for forecasting time series data based on an additive model where non-linear trends ar

Operating system Build Status Linux/Mac Windows tick tick is a Python 3 module for statistical learning, with a particular emphasis on time-dependent

tslearn The machine learning toolkit for time series analysis in Python Section Description Installation Installing the dependencies and tslearn Getti

Introduction Yield explorer is a WIP! I needed a tool that would show me historical data and performance of my staked crypto but was unable to find a

Neural Scene Flow Fields PyTorch implementation of paper "Neural Scene Flow Fields for Space-Time View Synthesis of Dynamic Scenes", CVPR 20

Write Better Python Code This repository contains the code examples used in my Write Better Python Code series published on YouTube: https:/

MOSAIC: A modular single-molecule analysis interface MOSAIC is a single molecule analysis toolbox that automatically decodes multi-state nanopore data

InVesalius InVesalius generates 3D medical imaging reconstructions based on a sequence of 2D DICOM files acquired with CT or MRI equipments. InVesaliu

Automatic Video Library Manager for TV Shows. It watches for new episodes of your favorite shows, and when they are posted it does its magic. Exclusiv

GTimeLog GTimeLog is a simple app for keeping track of time. Contents Installing Documentation Resources Credits Installing GTimeLog is packaged for D

Baby Buddy A buddy for babies! Helps caregivers track sleep, feedings, diaper changes, tummy time and more to learn about and predict baby's needs wit

Friture Friture is an application to visualize and analyze live audio data in real-time. Friture displays audio data in several widgets, such as a sco

Medical-Transformer Pytorch Code for the paper "Medical Transformer: Gated Axial-Attention for Medical Image Segmentation" About this repo: This repo

Dolly-Zoom I've always been amazed by the gradual perspective change of dolly zoom, and I have some experience in python and OpenCV, so I decided to c

TransUNet This repo holds code for TransUNet: Transformers Make Strong Encoders for Medical Image Segmentation Usage

ForecastGA is a tool that combines a couple of popular libraries, Atspy and googleanalytics, with a few enhancements.

DensePhrases provides answers to your natural language questions from the entire Wikipedia in real-time. While it efficiently searches the answers out of 60 billion phrases in Wikipedia, it is also very accurate having competitive accuracy with state-of-the-art open-domain QA models

"To deal with hyper-planes in a 14 dimensional space, visualize a 3D space and say 'fourteen' very loudly. Everyone does it." - Geoff Hinton Overview

Perspective is an interactive visualization component for large, real-time datasets. Originally developed for J.P. Morgan's trading business, Perspect

Project DeepSpeech DeepSpeech is an open-source Speech-To-Text engine, using a model trained by machine learning techniques based on Baidu's Deep Spee

text recognition toolbox 1. 项目介绍 该项目是基于pytorch深度学习框架，以统一的改写方式实现了以下6篇经典的文字识别论文，论文的详情如下。该项目会持续进行更新，欢迎大家提出问题以及对代码进行贡献。 模型 论文标题 发表年份 模型方法划分 CRNN 《An End-t

Welcome to LedFx ✨ -Making music come alive! LedFx website: https://ledfx.app/ What is LedFx? What LedFx offers is the ability to take audio input, an

EmbedSeg Introduction This repository hosts the version of the code used for the preprint Embedding-based Instance Segmentation of Microscopy Images.

MINIROCKET: A Very Fast (Almost) Deterministic Transform for Time Series Classification

Compile-Time Printer Compile-Time Printer prints values and types at compile-time in C++. Teaser test.cpp compile-time-printer

Non-AR Spatial-Temporal Transformer Introduction Implementation of the paper NAST: Non-Autoregressive Spatial-Temporal Transformer for Time Series For

streamlit-webrtc Example You can try out the sample app using the following commands.

BrowZen BrowZen correlates your emotional states with the web sites you visit to give you actionable insights about how you spend your time browsing t

"To deal with hyper-planes in a 14 dimensional space, visualize a 3D space and say 'fourteen' very loudly. Everyone does it." - Geoff Hinton Overview

Perspective is an interactive visualization component for large, real-time datasets. Originally developed for J.P. Morgan's trading business, Perspect

Yappi Yet Another Python Profiler, but this time thread&coroutine&greenlet aware. Highlights Fast: Yappi is fast. It is completely written in C and lo

This library provides run-time type checking for functions defined with PEP 484 argument (and return) type annotations. Four principal ways to do type

alive-progress :) A new kind of Progress Bar, with real-time throughput, eta and very cool animations! Ever found yourself in a remote ssh session, do

Text progress bar library for Python. Travis status: Coverage: Install The package can be installed through pip (this is the recommended method): pip

tqdm tqdm derives from the Arabic word taqaddum (تقدّم) which can mean "progress," and is an abbreviation for "I love you so much" in Spanish (te quie

ISO 8601 date/time parser This module implements ISO 8601 date, time and duration parsing. The implementation follows ISO8601:2004 standard, and imple

parsedatetime Parse human-readable date/time strings. Python 2.6 or greater is required for parsedatetime version 1.0 or greater. While we still test

Arrow: Better dates & times for Python Arrow is a Python library that offers a sensible and human-friendly approach to creating, manipulating, formatt

GoAccess What is it? GoAccess is an open source real-time web log analyzer and interactive viewer that runs in a terminal on *nix systems or through y

ngxtop - real-time metrics for nginx server (and others) ngxtop parses your nginx access log and outputs useful, top-like, metrics of your nginx serve

YolactEdge, the first competitive instance segmentation approach that runs on small edge devices at real-time speeds. Specifically, YolactEdge runs at up to 30.8 FPS on a Jetson AGX Xavier (and 172.7 FPS on an RTX 2080 Ti) with a ResNet-101 backbone on 550x550 resolution images.

PyOTP - The Python One-Time Password Library PyOTP is a Python library for generating and verifying one-time passwords. It can be used to implement tw

TimeTagger is a web-based time-tracking solution that can be run locally or on a server. In the latter case, you'll want to add authentication, and also be aware of the license restrictions.

Pytorch Medical Segmentation Read Chinese Introduction：Here！ Recent Updates 2021.1.8 The train and test codes are released. 2021.2.6 A bug in dice was

Informer: Beyond Efficient Transformer for Long Sequence Time-Series Forecasting This is the origin Pytorch implementation of Informer in the followin

Registration form with RDS AWS database and facial recognition via OpenCV The algorithm performs a simple user registration (Name, CPF, E-mail and Tel

RTS3D: Real-time Stereo 3D Detection from 4D Feature-Consistency Embedding Space for Autonomous Driving (AAAI2021). RTS3D is efficiency and accuracy s

FastAudioVisual Our project is developed here. The goal finish time is March 01, 2021 What is FastAudioVisual? FastAudioVisual is a tool that allows u

FullSubNet This Git repository for the official PyTorch implementation of "A Full-Band and Sub-Band Fusion Model for Real-Time Single-Channel Speech E

Context Matters: Graph-based Self-supervised Representation Learning for Medical Images Official PyTorch implementation for paper Context Matters: Gra

Autobahn|Python WebSocket & WAMP for Python on Twisted and asyncio. Quick Links: Source Code - Documentation - WebSocket Examples - WAMP Examples Comm

FreezeGun: Let your Python tests travel through time FreezeGun is a library that allows your Python tests to travel through time by mocking the dateti

FreezeGun: Let your Python tests travel through time FreezeGun is a library that allows your Python tests to travel through time by mocking the dateti

Welcome to sktime A unified framework for machine learning with time series We provide specialized time series algorithms and scikit-learn compatible

Build Type Linux MacOS Windows Build Status OpenPose has represented the first real-time multi-person system to jointly detect human body, hand, facia

imutils A series of convenience functions to make basic image processing functions such as translation, rotation, resizing, skeletonization, and displ

PyTime PyTime is an easy-use Python module which aims to operate date/time/datetime by string. PyTime allows you using nonregular datetime string to g

Pendulum Python datetimes made easy. Supports Python 2.7 and 3.4+. import pendulum now_in_paris = pendulum.now('Europe/Paris') now_in_par

Maya: Datetimes for Humans™ Datetimes are very frustrating to work with in Python, especially when dealing with different locales on different systems

Delorean: Time Travel Made Easy Delorean is a library for clearing up the inconvenient truths that arise dealing with datetimes in Python. Understandi

dateutil - powerful extensions to datetime The dateutil module provides powerful extensions to the standard datetime module, available in Python. Inst

This library provides run-time type checking for functions defined with PEP 484 argument (and return) type annotations. Four principal ways to do type

Autobahn|Python WebSocket & WAMP for Python on Twisted and asyncio. Quick Links: Source Code - Documentation - WebSocket Examples - WAMP Examples Comm

Status About eyeD3 is a Python tool for working with audio files, specifically MP3 files containing ID3 metadata (i.e. song info). It provides a comma

Flower Flower is a web based tool for monitoring and administrating Celery clusters. Features Real-time monitoring using Celery Events Task progress a