Python Modelling-biological-systems Resources

This repository contains code to train and test GNN models for recommendation, mainly using the Deep Graph Library (DGL).

libmaths libmaths was created not only as a learning experience for me, but as a way to make mathematical models in seconds for Python users using mat

PwnLnX An advanced multi-threaded, multi-client python reverse shell for hacking linux systems. There's still more work to do so feel free to help out

LiuAlgoTrader is a scalable, multi-process ML-ready framework for effective algorithmic trading. The framework simplify development, testing, deployment, analysis and training algo trading strategies. The framework automatically analyzes trading sessions, and the analysis may be used to train predictive models.

Gaphor is a UML and SysML modeling application written in Python. It is designed to be easy to use, while still being powerful. Gaphor implements a fully-compliant UML 2 data model, so it is much more than a picture drawing tool. You can use Gaphor to quickly visualize different aspects of a system as well as create complete, highly complex models.

The SLIDE package contains the source code for reproducing the main experiments in this paper. Dataset The Datasets can be downloaded in Amazon-

bulbea "Deep Learning based Python Library for Stock Market Prediction and Modelling." Table of Contents Installation Usage Documentation Dependencies

pyproj Python interface to PROJ (cartographic projections and coordinate transformations library). Documentation Stable: http://pyproj4.github.io/pypr

Top2Vec is an algorithm for topic modeling and semantic search. It automatically detects topics present in text and generates jointly embedded topic, document and word vectors.

Please consider citing the JMLR-MLOSS Manuscript if you've used pomegranate in your academic work! pomegranate is a package for building probabilistic

PyTorch Implementation of Differentiable SDE Solvers This library provides stochastic differential equation (SDE) solvers with GPU support and efficie

Hivemind: decentralized deep learning in PyTorch Hivemind is a PyTorch library to train large neural networks across the Internet. Its intended usage

pyproj Python interface to PROJ (cartographic projections and coordinate transformations library). Documentation Stable: http://pyproj4.github.io/pypr

SPLASH: Semantic Parsing with Language Assistance from Humans SPLASH is dataset for the task of semantic parse correction with natural language feedba

capbot-siic Repository to hold code for the cap-bot varient that is being presented at the SIIC Defence Hackathon 2021. Problem Inspiration A plethora

Passive TCP/IP Fingerprinting This is a passive TCP/IP fingerprinting tool. Run this on your server and find out what operating systems your clients a

[ICLR 2021] "UMEC: Unified Model and Embedding Compression for Efficient Recommendation Systems" by Jiayi Shen, Haotao Wang*, Shupeng Gui*, Jianchao Tan, Zhangyang Wang, and Ji Liu

Gaphor Gaphor is a UML and SysML modeling application written in Python. It is designed to be easy to use, while still being powerful. Gaphor implemen

Oncall See admin docs for information on how to run and manage Oncall. Development setup Prerequisites Debian/Ubuntu - sudo apt-get install libsasl2-d

Glances - An eye on your system Summary Glances is a cross-platform monitoring tool which aims to present a large amount of monitoring information thr

A supervised domain-agnostic framework that allows for probabilistic modelling, namely the prediction of probability distributions for individual data

Applied Reinforcement Learning @ Facebook Overview ReAgent is an open source end-to-end platform for applied reinforcement learning (RL) developed and

eXtreme Gradient Boosting Community | Documentation | Resources | Contributors | Release Notes XGBoost is an optimized distributed gradient boosting l

Operating system Build Status Linux/Mac Windows tick tick is a Python 3 module for statistical learning, with a particular emphasis on time-dependent

CellProfiler is a free open-source software designed to enable biologists without training in computer vision or programming to quantitatively measure

libmaths was created not only as a learning experience for me, but as a way to make mathematical models in seconds for Python users using mat

Gaphor Gaphor is a UML and SysML modeling application written in Python. It is designed to be easy to use, while still being powerful. Gaphor implemen

Py4J Py4J enables Python programs running in a Python interpreter to dynamically access Java objects in a Java Virtual Machine. Methods are called as

KStrike Stand-alone parser for User Access Logging from Server 2012 and newer systems BriMor Labs KStrike This script will parse data from the User Ac

gensim – Topic Modelling in Python Gensim is a Python library for topic modelling, document indexing and similarity retrieval with large corpora. Targ

Texar is a toolkit aiming to support a broad set of machine learning, especially natural language processing and text generation tasks. Texar provides

DeepPavlov is an open-source conversational AI library built on TensorFlow, Keras and PyTorch. DeepPavlov is designed for development of production re

Loudness Loudness is a C++ library with Python bindings for modelling perceived loudness. The library consists of processing modules which can be casc

Persine, the Persona Engine Persine is an automated tool to study and reverse-engineer algorithmic recommendation systems. It has a simple interface a

PyTorch Tabular aims to make Deep Learning with Tabular data easy and accessible to real-world cases and research alike.

gensim – Topic Modelling in Python Gensim is a Python library for topic modelling, document indexing and similarity retrieval with large corpora. Targ

Texar is a toolkit aiming to support a broad set of machine learning, especially natural language processing and text generation tasks. Texar provides

DeepPavlov is an open-source conversational AI library built on TensorFlow, Keras and PyTorch. DeepPavlov is designed for development of production re

eXtreme Gradient Boosting Community | Documentation | Resources | Contributors | Release Notes XGBoost is an optimized distributed gradient boosting l

Glances - An eye on your system Summary Glances is a cross-platform monitoring tool which aims to present a large amount of monitoring information thr

GoAccess What is it? GoAccess is an open source real-time web log analyzer and interactive viewer that runs in a terminal on *nix systems or through y

OpenVINO Inference API This is a repository for an object detection inference API using the OpenVINO. It's supported on both Windows and Linux Operati

Overview Surprise is a Python scikit for building and analyzing recommender systems that deal with explicit rating data. Surprise was designed with th

gensim – Topic Modelling in Python Gensim is a Python library for topic modelling, document indexing and similarity retrieval with large corpora. Targ

DeepPavlov is an open-source conversational AI library built on TensorFlow, Keras and PyTorch. DeepPavlov is designed for development of production re

Cornac Cornac is a comparative framework for multimodal recommender systems. It focuses on making it convenient to work with models leveraging auxilia

Recommenders What's New (February 4, 2021) We have a new relase Recommenders 2021.2! It comes with lots of bug fixes, optimizations and 3 new algorith

Please consider citing the JMLR-MLOSS Manuscript if you've used pomegranate in your academic work! pomegranate is a package for building probabilistic

gensim – Topic Modelling in Python Gensim is a Python library for topic modelling, document indexing and similarity retrieval with large corpora. Targ

eXtreme Gradient Boosting Community | Documentation | Resources | Contributors | Release Notes XGBoost is an optimized distributed gradient boosting l

The MicroPython project This is the MicroPython project, which aims to put an implementation of Python 3.x on microcontrollers and small embedded syst

Python Stream Processing Version: 1.10.4 Web: http://faust.readthedocs.io/ Download: http://pypi.org/project/faust Source: http://github.com/robinhood

Ansible Ansible is a radically simple IT automation system. It handles configuration management, application deployment, cloud provisioning, ad-hoc ta