193 Repositories
Python ontology-design-patterns Libraries
Jupyter Dock is a set of Jupyter Notebooks for performing molecular docking protocols interactively, as well as visualizing, converting file formats and analyzing the results.
Molecular Docking integrated in Jupyter Notebooks Description | Citation | Installation | Examples | Limitations | License Table of content Descriptio
Make posters from Markdown files.
MkPosters Create posters using Markdown. Supports icons, admonitions, and LaTeX mathematics. At the moment it is restricted to the specific layout of
Simple, Fast, Powerful and Easily extensible python package for extracting patterns from text, with over than 60 predefined Regular Expressions.
patterns-finder Simple, Fast, Powerful and Easily extensible python package for extracting patterns from text, with over than 60 predefined Regular Ex
RITA is a family of autoregressive protein models, developed by LightOn in collaboration with the OATML group at Oxford and the Debora Marks Lab at Harvard.
RITA: a Study on Scaling Up Generative Protein Sequence Models RITA is a family of autoregressive protein models, developed by a collaboration of Ligh
In this tutorial, you will perform inference across 10 well-known pre-trained object detectors and fine-tune on a custom dataset. Design and train your own object detector.
Object Detection Object detection is a computer vision task for locating instances of predefined objects in images or videos. In this tutorial, you wi
Implementation of the GVP-Transformer, which was used in the paper "Learning inverse folding from millions of predicted structures" for de novo protein design alongside Alphafold2
GVP Transformer (wip) Implementation of the GVP-Transformer, which was used in the paper Learning inverse folding from millions of predicted structure
API for RL algorithm design & testing of BCA (Building Control Agent) HVAC on EnergyPlus building energy simulator by wrapping their EMS Python API
RL - EmsPy (work In Progress...) The EmsPy Python package was made to facilitate Reinforcement Learning (RL) algorithm research for developing and tes
Architecture Patterns with Python (TDD, DDD, EDM)
architecture-traning Architecture Patterns with Python (TDD, DDD, EDM) Chapter 5. 높은 기어비와 낮은 기어비의 TDD 5.2 도메인 계층 테스트를 서비스 계층으로 옮겨야 하는가? 도메인 계층 테스트 def
OntoSeer is a tool to help users build better quality ontologies
Ontoseer This document provides documentation for the first version of OntoSeer.OntoSeer is a tool that monitors the ontology development process andp
GeneDisco is a benchmark suite for evaluating active learning algorithms for experimental design in drug discovery.
GeneDisco is a benchmark suite for evaluating active learning algorithms for experimental design in drug discovery.
The starter repository for submissions to the GeneDisco challenge for optimized experimental design in genetic perturbation experiments
GeneDisco ICLR-22 Challenge Starter Repository The starter repository for submissions to the GeneDisco challenge for optimized experimental design in
Pytorch Implementation of "Desigining Network Design Spaces", Radosavovic et al. CVPR 2020.
RegNet Pytorch Implementation of "Desigining Network Design Spaces", Radosavovic et al. CVPR 2020. Paper | Official Implementation RegNet offer a very
Client-Server design (guess the closest number to the average score game)
Multiplayer game (enter the number closest to the average) Design Client-Server design The client's side is responsible for sending numbers from the g
Building a Mario-like, classic platformer game in Python using the PyGame Library
Building a Mario-like, classic platformer game in Python using the PyGame Library
An awesome list of AI for art and design - resources, and popular datasets and how we may apply computer vision tasks to art and design.
Awesome AI for Art & Design An awesome list of AI for art and design - resources, and popular datasets and how we may apply computer vision tasks to a
Reso is a low-level circuit design language and simulator, inspired by things like Redstone, Conway's Game of Life, and Wireworld.
Reso Reso is a low-level circuit design language and simulator, inspired by things like Redstone, Conway's Game of Life, and Wireworld. What is Reso?
RefineGNN - Iterative refinement graph neural network for antibody sequence-structure co-design (RefineGNN)
Iterative refinement graph neural network for antibody sequence-structure co-des
What games should I design next quarter?
Project1_Next-Quarter-Game-Design-Prediction What games should I design next quarter? 상황 : 게임회사 데이터팀 합류 문제 : '다음 분기에 어떤 게임을 설계해야할까' Data Description N
The MLOps is the process of continuous integration and continuous delivery of Machine Learning artifacts as a software product, keeping it inside a loop of Design, Model Development and Operations.
MLOps The MLOps is the process of continuous integration and continuous delivery of Machine Learning artifacts as a software product, keeping it insid
A large-scale benchmark for co-optimizing the design and control of soft robots, as seen in NeurIPS 2021.
Evolution Gym A large-scale benchmark for co-optimizing the design and control of soft robots. As seen in Evolution Gym: A Large-Scale Benchmark for E
OntoProtein: Protein Pretraining With Ontology Embedding
OntoProtein This is the implement of the paper "OntoProtein: Protein Pretraining With Ontology Embedding". OntoProtein is an effective method that mak
Improved Fitness Optimization Landscapes for Sequence Design
ReLSO Improved Fitness Optimization Landscapes for Sequence Design Description Citation How to run Training models Original data source Description In
Clustering is a popular approach to detect patterns in unlabeled data
Visual Clustering Clustering is a popular approach to detect patterns in unlabeled data. Existing clustering methods typically treat samples in a data
Random pass word generator made with python. PyQt5 module is used to design GUI.
Differences in this GUI program : Default titlebar removed Custom Minimize,Maximize and Close Buttons Drag & move window from any point Program work l
Code for the paper "Generative design of breakwaters usign deep convolutional neural network as a surrogate model"
Generative design of breakwaters usign deep convolutional neural network as a surrogate model This repository contains the code for the paper "Generat
HairCLIP: Design Your Hair by Text and Reference Image
Overview This repository hosts the official PyTorch implementation of the paper: "HairCLIP: Design Your Hair by Text and Reference Image". Our single
Single Red Blood Cell Hydrodynamic Traps Via the Generative Design
Rbc-traps-generative-design - The generative design for single red clood cell hydrodynamic traps using GEFEST framework
PrimaryBid - Transform application Lifecycle Data and Design and ETL pipeline architecture for ingesting data from multiple sources to redshift
Transform application Lifecycle Data and Design and ETL pipeline architecture for ingesting data from multiple sources to redshift This project is composed of two parts: Part1 and Part2
Course on computational design, non-linear optimization, and dynamics of soft systems at UIUC.
Computational Design and Dynamics of Soft Systems · This is a repository that contains the source code for generating the lecture notes, handouts, exe
Procscan is a quick and dirty python script used to look for potentially dangerous api call patterns in a Procmon PML file.
PROCSCAN Procscan is a quick and dirty python script used to look for potentially dangerous api call patterns in a Procmon PML file. Installation git
Aircraft design optimization made fast through modern automatic differentiation
Aircraft design optimization made fast through modern automatic differentiation. Plug-and-play analysis tools for aerodynamics, propulsion, structures, trajectory design, and much more.
💊 A 3D Generative Model for Structure-Based Drug Design (NeurIPS 2021)
A 3D Generative Model for Structure-Based Drug Design Coming soon... Citation @inproceedings{luo2021sbdd, title={A 3D Generative Model for Structu
To Design and Implement Logistic Regression to Classify Between Benign and Malignant Cancer Types
To Design and Implement Logistic Regression to Classify Between Benign and Malignant Cancer Types, from a Database Taken From Dr. Wolberg reports his Clinic Cases.
The GUI application by Python3.8. Using QT Design draw UI and generator UI XML file provides to PySide2 build GUI components
The GUI application by Python3.8. Using QT Design draw UI and generator UI XML file provides to PySide2 build GUI components. Total adopt OOD design class, service, and abstract class. OOP implemented this project.
To design and implement the Identification of Iris Flower species using machine learning using Python and the tool Scikit-Learn.
To design and implement the Identification of Iris Flower species using machine learning using Python and the tool Scikit-Learn.
Discovering local read-level DNA methylation patterns and DNA methylation heterogeneity in intermediately methylated regions
Discovering local read-level DNA methylation patterns and DNA methylation heterogeneity in intermediately methylated regions
PAMI stands for PAttern MIning. It constitutes several pattern mining algorithms to discover interesting patterns in transactional/temporal/spatiotemporal databases
Introduction PAMI stands for PAttern MIning. It constitutes several pattern mining algorithms to discover interesting patterns in transactional/tempor
Orbital-patterns - A program which plots pattern that revolving planets make
orbital-patterns Click to spawn planets Press "S" to capture screenshot. Image w
Python bindings for Basler's VisualApplets TCL script generation
About visualapplets.py The Basler AG company provides a TCL scripting engine to automatize the creation of VisualApplets designs (a former Silicon Sof
Design-by-contract in Python3 with informative violation messages and inheritance
icontract icontract provides design-by-contract to Python3 with informative violation messages and inheritance. It also gives a base for a flourishing
This is a passport scanning web service to help you scan, identify and validate your passport created with a simple and flexible design and ready to be integrated right into your system!
Passport-Recogniton-System This is a passport scanning web service to help you scan, identify and validate your passport created with a simple and fle
Benchmarks for Model-Based Optimization
Design-Bench Design-Bench is a benchmarking framework for solving automatic design problems that involve choosing an input that maximizes a black-box
An Object Oriented Programming (OOP) interface for Ontology Web language (OWL) ontologies.
Enabling a developer to use Ontology Web Language (OWL) along with its reasoning capabilities in an Object Oriented Programming (OOP) paradigm, by pro
Ml-design-patterns - Source code accompanying O'Reilly book: Machine Learning Design Patterns
This is not an official Google product ml-design-patterns Source code accompanying O'Reilly book: Title: Machine Learning Design Patterns Authors: Val
Yoloxkeypointsegment - An anchor-free version of YOLO, with a simpler design but better performance
Introduction 关键点版本:已完成 全景分割版本:已完成 实例分割版本:已完成 YOLOX is an anchor-free version of
A quick reference guide to the most commonly used patterns and functions in PySpark SQL
Using PySpark we can process data from Hadoop HDFS, AWS S3, and many file systems. PySpark also is used to process real-time data using Streaming and
A wrapper around the python Tkinter library for customizable and modern ui-elements in Tkinter
CustomTkinter With CustomTkinter you can create modern looking user interfaces in python with tkinter. CustomTkinter is a tkinter extension which prov
A simple electrical network analyzer, BASED ON computer-aided design.
Electrical Network Analyzer A simple electrical network analyzer. Given the oriented graph of the electrical network (circut), BASED ON computer-aided
Simple and Robust Loss Design for Multi-Label Learning with Missing Labels
Simple and Robust Loss Design for Multi-Label Learning with Missing Labels Official PyTorch Implementation of the paper Simple and Robust Loss Design
Design by contract for Python. Write bug-free code. Add a few decorators, get static analysis and tests for free.
A Python library for design by contract (DbC) and checking values, exceptions, and side-effects. In a nutshell, deal empowers you to write bug-free co
Flask Boilerplate - Paper Kit Design | AppSeed
Flask Paper Kit Open-Source Web App coded in Flask Framework - Provided by AppSeed Web App Generator. App Features: SQLite database SQLAlchemy ORM Ses
objectfactory is a python package to easily implement the factory design pattern for object creation, serialization, and polymorphism
py-object-factory objectfactory is a python package to easily implement the factory design pattern for object creation, serialization, and polymorphis
Simple alternative to Doodle polls and scheduling (Python 3, Django 3, JavaScript)
What is jawanndenn? jawanndenn is a simple web application to schedule meetings and run polls, a libre alternative to Doodle. It is using the followin
Architectural Patterns implementation by using notification handler module prototype
This repository covers singleton, indirection, factory, adaptor, mediator patterns in python language by using university hypothetical notification module prototype. The code is just for demonstrating the pattern implementation not modules working
Simple yet powerful CAD (Computer Aided Design) library, written with Python.
Py-MADCAD it's time to throw parametric softwares out ! Simple yet powerful CAD (Computer Aided Design) library, written with Python. Installation
Flask Boilerplate - Material Kit Design | AppSeed
Flask Boilerplate - Material Kit Design | AppSeed
Django Boilerplate - Material Kit Design | AppSeed
Django Boilerplate - Material Kit Design | AppSeed
Minimal authorization through OO design and pure Ruby classes
Pundit Pundit provides a set of helpers which guide you in leveraging regular Ruby classes and object oriented design patterns to build a simple, robu
HairCLIP: Design Your Hair by Text and Reference Image
Overview This repository hosts the official PyTorch implementation of the paper: "HairCLIP: Design Your Hair by Text and Reference Image". Our single
State-of-the-art NLP through transformer models in a modular design and consistent APIs.
Trapper (Transformers wRAPPER) Trapper is an NLP library that aims to make it easier to train transformer based models on downstream tasks. It wraps h
Systemic Evolutionary Chemical Space Exploration for Drug Discovery
SECSE SECSE: Systemic Evolutionary Chemical Space Explorer Chemical space exploration is a major task of the hit-finding process during the pursuit of
RID-Noise: Towards Robust Inverse Design under Noisy Environments
This is code of RID-Noise. Reproduce RID-Noise Results Toy tasks Please refer to the notebook ridnoise.ipynb to view experiments on three toy tasks. B
Unofficial implementation of "Coordinate Attention for Efficient Mobile Network Design"
Unofficial implementation of "Coordinate Attention for Efficient Mobile Network Design". CoordAttention tensorflow slim
A design of MIDI language for music generation task, specifically for Natural Language Processing (NLP) models.
MIDI Language Introduction Reference Paper: Pop Music Transformer: Beat-based Modeling and Generation of Expressive Pop Piano Compositions: code This
BERTMap: A BERT-Based Ontology Alignment System
BERTMap: A BERT-based Ontology Alignment System Important Notices The relevant paper was accepted in AAAI-2022. Arxiv version is available at: https:/
This repository contains the map content ontology used in narrative cartography
Narrative-cartography-ontology This repository contains the map content ontology used in narrative cartography, which is associated with a submission
Explicable Reward Design for Reinforcement Learning Agents [NeurIPS'21]
Explicable Reward Design for Reinforcement Learning Agents [NeurIPS'21]
The official colors of the FAU as matplotlib/seaborn colormaps
FAU - Colors The official colors of Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU) as matplotlib / seaborn colormaps. We support the old colo
Testability-Aware Low Power Controller Design with Evolutionary Learning, ITC2021
Testability-Aware Low Power Controller Design with Evolutionary Learning This repo contains the source code of Testability-Aware Low Power Controller
Problem statements on System Design and Software Architecture as part of Arpit's System Design Masterclass
Problem statements on System Design and Software Architecture as part of Arpit's System Design Masterclass
Image Tooᥣs Bot I specialize for logo design Services with Amazing logo Creator Platform and more tools
Image Tooᥣs Bot I specialize for logo design Services with Amazing logo Creator Platform and more tools
Complex heatmaps are efficient to visualize associations between different sources of data sets and reveal potential patterns.
Make Complex Heatmaps Complex heatmaps are efficient to visualize associations between different sources of data sets and reveal potential patterns. H
DeepHawkeye is a library to detect unusual patterns in images using features from pretrained neural networks
English | 简体中文 Introduction DeepHawkeye is a library to detect unusual patterns in images using features from pretrained neural networks Reference Pat
Design and build a wrapper for the Open Weather API current weather data service
Design and build a wrapper for the Open Weather API current weather data service that returns a city's temperature, with caching, also allowing for the temperature of the latest queried cities that are still validly cached to be retrieved.
Leveraging Unique CPS Properties to Design Better Privacy-Enhancing Algorithms
Differential_Privacy_CPS Python implementation of the research paper Leveraging Unique CPS Properties to Design Better Privacy-Enhancing Algorithms Re
Bio-Computing Platform Featuring Large-Scale Representation Learning and Multi-Task Deep Learning “螺旋桨”生物计算工具集
English | 简体中文 Latest News 2021.10.25 Paper "Docking-based Virtual Screening with Multi-Task Learning" is accepted by BIBM 2021. 2021.07.29 PaddleHeli
Official PyTorch implementation of "Synthesis of Screentone Patterns of Manga Characters"
Manga Character Screentone Synthesis Official PyTorch implementation of "Synthesis of Screentone Patterns of Manga Characters" presented in IEEE ISM 2
Cooperative multi-agent reinforcement learning for high-dimensional nonequilibrium control
Cooperative multi-agent reinforcement learning for high-dimensional nonequilibrium control Official implementation of: Cooperative multi-agent reinfor
Next-gen Rowhammer fuzzer that uses non-uniform, frequency-based patterns.
Blacksmith Rowhammer Fuzzer This repository provides the code accompanying the paper Blacksmith: Scalable Rowhammering in the Frequency Domain that is
Software Design | Spring 2020 | Classic Arcade Game
Breakout Software Design Final Project, Spring 2020 Team members: Izumi, Lilo For our Interactive Visualization, we implemented the classic arcade gam
gdsfactory is an EDA (electronics design automation) tool to Layout Integrated Circuits.
gdsfactory 3.5.5 gdsfactory is an EDA (electronics design automation) tool to Layout Integrated Circuits. It is build on top of phidl gdspy and klayou
3D-printable hexagonal mirror array capable of reflecting sunlight into arbitrary patterns
3D-printable hexagonal mirror array capable of reflecting sunlight into arbitrary patterns
Python wrapper to different clients to determine how a particular term is used.
Python wrapper to different clients to determine how a particular term is used.
JLC2KICAD_lib is a python script that generate a component library for KiCad from the JLCPCB/easyEDA library.
JLC2KiCad_lib is a python script that generate a component library (schematic, footprint and 3D model) for KiCad from the JLCPCB/easyEDA library. This script requires Python 3.6 or higher.
Readings for "A Unified View of Relational Deep Learning for Polypharmacy Side Effect, Combination Therapy, and Drug-Drug Interaction Prediction."
Polypharmacy - DDI - Synergy Survey The Survey Paper This repository accompanies our survey paper A Unified View of Relational Deep Learning for Polyp
System Design Assignments as part of Arpit's System Design Masterclass
System Design Assignments The repository contains a set of problem statements around Software Architecture and System Design as conducted by Arpit's S
A GUI-based (PyQt5) tool used to design 2D linkage mechanism.
Pyslvs-UI A GUI-based (PyQt5) tool used to design 2D linkage mechanism. Planar Linkages Simulation Python-Solvespace: Kernel from Solvespace with Cyth
Web app for spotify playlist management with last.fm integration
Music Tools Set of utility tools for Spotify and Last.fm. Built on my other libraries for Spotify (spotframework), Last.fm (fmframework) and interfaci
Production Ontology Merging (PrOM) Framework
Production Ontology Merging (PrOM) Framework OWL 2 DL ontology merging framework tailored to the production domain Features preprocessing: translation
Youtube Downloader GUI
Python Youtube Downloader GUI This is a GUI application that allows you to download videos from Youtube. Features Download videos from Youtube in MP3
Styled text-to-drawing synthesis method. Featured at the 2021 NeurIPS Workshop on Machine Learning for Creativity and Design
Styled text-to-drawing synthesis method. Featured at the 2021 NeurIPS Workshop on Machine Learning for Creativity and Design
Autonomous Ground Vehicle Navigation and Control Simulation Examples in Python
Autonomous Ground Vehicle Navigation and Control Simulation Examples in Python THIS PROJECT IS CURRENTLY A WORK IN PROGRESS AND THUS THIS REPOSITORY I
McGill Physics Hackathon 2021: Reaction-Diffusion Models for the Generation of Biological Patterns
DiffuseAnimals: Reaction-Diffusion Models for the Generation of Biological Patterns Introduction Reaction-diffusion equations can be utilized in order
Readings for "A Unified View of Relational Deep Learning for Polypharmacy Side Effect, Combination Therapy, and Drug-Drug Interaction Prediction."
Polypharmacy - DDI - Synergy Survey The Survey Paper This repository accompanies our survey paper A Unified View of Relational Deep Learning for Polyp
Text Classification Using LSTM
Text classification is the task of assigning a set of predefined categories to free text. Text classifiers can be used to organize, structure, and categorize pretty much anything. For example, new articles can be organized by topics, support tickets can be organized by urgency, chat conversations can be organized by language, brand mentions can be organized by sentiment, and so on.
Implicit Deep Adaptive Design (iDAD)
Implicit Deep Adaptive Design (iDAD) This code supports the NeurIPS paper 'Implicit Deep Adaptive Design: Policy-Based Experimental Design without Lik
Discord Multi Tool that focuses on design and easy usage
Multi-Tool-v1.0 Discord Multi Tool that focuses on design and easy usage Delete webhook Block all friends Spam webhook Modify webhook Webhook info Tok
Syllabic Quantity Patterns as Rhythmic Features for Latin Authorship Attribution
Syllabic Quantity Patterns as Rhythmic Features for Latin Authorship Attribution Abstract Within the Latin (and ancient Greek) production, it is well
A booklet on machine learning systems design with exercises
Machine Learning Systems Design Read this booklet here. This booklet covers four main steps of designing a machine learning system: Project setup Data
Towards the D-Optimal Online Experiment Design for Recommender Selection (KDD 2021)
Towards the D-Optimal Online Experiment Design for Recommender Selection (KDD 2021) Contact [email protected] or [email protected] for questions