250 Repositories
Python optimal-experimental-design Libraries
Jupyter Dock is a set of Jupyter Notebooks for performing molecular docking protocols interactively, as well as visualizing, converting file formats and analyzing the results.
Molecular Docking integrated in Jupyter Notebooks Description | Citation | Installation | Examples | Limitations | License Table of content Descriptio
Make posters from Markdown files.
MkPosters Create posters using Markdown. Supports icons, admonitions, and LaTeX mathematics. At the moment it is restricted to the specific layout of
RITA is a family of autoregressive protein models, developed by LightOn in collaboration with the OATML group at Oxford and the Debora Marks Lab at Harvard.
RITA: a Study on Scaling Up Generative Protein Sequence Models RITA is a family of autoregressive protein models, developed by a collaboration of Ligh
The repository contains reproducible PyTorch source code of our paper Generative Modeling with Optimal Transport Maps, ICLR 2022.
Generative Modeling with Optimal Transport Maps The repository contains reproducible PyTorch source code of our paper Generative Modeling with Optimal
In this tutorial, you will perform inference across 10 well-known pre-trained object detectors and fine-tune on a custom dataset. Design and train your own object detector.
Object Detection Object detection is a computer vision task for locating instances of predefined objects in images or videos. In this tutorial, you wi
Implementation of the GVP-Transformer, which was used in the paper "Learning inverse folding from millions of predicted structures" for de novo protein design alongside Alphafold2
GVP Transformer (wip) Implementation of the GVP-Transformer, which was used in the paper Learning inverse folding from millions of predicted structure
API for RL algorithm design & testing of BCA (Building Control Agent) HVAC on EnergyPlus building energy simulator by wrapping their EMS Python API
RL - EmsPy (work In Progress...) The EmsPy Python package was made to facilitate Reinforcement Learning (RL) algorithm research for developing and tes
Experimental Python implementation of OpenVINO Inference Engine (very slow, limited functionality). All codes are written in Python. Easy to read and modify.
PyOpenVINO - An Experimental Python Implementation of OpenVINO Inference Engine (minimum-set) Description The PyOpenVINO is a spin-off product from my
SHAS: Approaching optimal Segmentation for End-to-End Speech Translation
SHAS: Approaching optimal Segmentation for End-to-End Speech Translation In this repo you can find the code of the Supervised Hybrid Audio Segmentatio
OntoSeer is a tool to help users build better quality ontologies
Ontoseer This document provides documentation for the first version of OntoSeer.OntoSeer is a tool that monitors the ontology development process andp
GeneDisco is a benchmark suite for evaluating active learning algorithms for experimental design in drug discovery.
GeneDisco is a benchmark suite for evaluating active learning algorithms for experimental design in drug discovery.
The starter repository for submissions to the GeneDisco challenge for optimized experimental design in genetic perturbation experiments
GeneDisco ICLR-22 Challenge Starter Repository The starter repository for submissions to the GeneDisco challenge for optimized experimental design in
Implementations of the algorithms in the paper Approximative Algorithms for Multi-Marginal Optimal Transport and Free-Support Wasserstein Barycenters
Implementations of the algorithms in the paper Approximative Algorithms for Multi-Marginal Optimal Transport and Free-Support Wasserstein Barycenters
Python package for concise, transparent, and accurate predictive modeling
Python package for concise, transparent, and accurate predictive modeling. All sklearn-compatible and easy to use. 📚 docs • 📖 demo notebooks Modern
Pytorch Implementation of "Desigining Network Design Spaces", Radosavovic et al. CVPR 2020.
RegNet Pytorch Implementation of "Desigining Network Design Spaces", Radosavovic et al. CVPR 2020. Paper | Official Implementation RegNet offer a very
Client-Server design (guess the closest number to the average score game)
Multiplayer game (enter the number closest to the average) Design Client-Server design The client's side is responsible for sending numbers from the g
Building a Mario-like, classic platformer game in Python using the PyGame Library
Building a Mario-like, classic platformer game in Python using the PyGame Library
An awesome list of AI for art and design - resources, and popular datasets and how we may apply computer vision tasks to art and design.
Awesome AI for Art & Design An awesome list of AI for art and design - resources, and popular datasets and how we may apply computer vision tasks to a
Wordle-player - An optimal player for Wordle. Based on a rough understanding of information theory
Wordle-player - An optimal player for Wordle. Based on a rough understanding of information theory
Reso is a low-level circuit design language and simulator, inspired by things like Redstone, Conway's Game of Life, and Wireworld.
Reso Reso is a low-level circuit design language and simulator, inspired by things like Redstone, Conway's Game of Life, and Wireworld. What is Reso?
RefineGNN - Iterative refinement graph neural network for antibody sequence-structure co-design (RefineGNN)
Iterative refinement graph neural network for antibody sequence-structure co-des
What games should I design next quarter?
Project1_Next-Quarter-Game-Design-Prediction What games should I design next quarter? 상황 : 게임회사 데이터팀 합류 문제 : '다음 분기에 어떤 게임을 설계해야할까' Data Description N
Optimal Transport Tools (OTT), A toolbox for all things Wasserstein.
Optimal Transport Tools (OTT), A toolbox for all things Wasserstein. See full documentation for detailed info on the toolbox. The goal of OTT is to pr
An experimental script to perform bulk parsing of arbitrary file features with YARA and console logging.
RonnieColemanYARAParser This script is named after Ronnie Coleman, and peforms bulk lifts on arbitary file features using YARA console logging. Requir
The MLOps is the process of continuous integration and continuous delivery of Machine Learning artifacts as a software product, keeping it inside a loop of Design, Model Development and Operations.
MLOps The MLOps is the process of continuous integration and continuous delivery of Machine Learning artifacts as a software product, keeping it insid
A large-scale benchmark for co-optimizing the design and control of soft robots, as seen in NeurIPS 2021.
Evolution Gym A large-scale benchmark for co-optimizing the design and control of soft robots. As seen in Evolution Gym: A Large-Scale Benchmark for E
Near-Optimal Sparse Allreduce for Distributed Deep Learning (published in PPoPP'22)
Near-Optimal Sparse Allreduce for Distributed Deep Learning (published in PPoPP'22) Ok-Topk is a scheme for distributed training with sparse gradients
Improved Fitness Optimization Landscapes for Sequence Design
ReLSO Improved Fitness Optimization Landscapes for Sequence Design Description Citation How to run Training models Original data source Description In
Instantaneous Motion Generation for Robots and Machines.
Ruckig Instantaneous Motion Generation for Robots and Machines. Ruckig generates trajectories on-the-fly, allowing robots and machines to react instan
Random pass word generator made with python. PyQt5 module is used to design GUI.
Differences in this GUI program : Default titlebar removed Custom Minimize,Maximize and Close Buttons Drag & move window from any point Program work l
Code for the paper "Generative design of breakwaters usign deep convolutional neural network as a surrogate model"
Generative design of breakwaters usign deep convolutional neural network as a surrogate model This repository contains the code for the paper "Generat
Talon accessibility - Experimental Talon integrations using macOS accessibility APIs
talon_accessibility Experimental Talon integrations using macOS accessibility AP
Leap is an experimental package written to enable the utilization of C-like goto statements in Python functions
Leap is an experimental package written to enable the utilization of C-like goto statements in Python functions
Reading Group @mila-iqia on Computational Optimal Transport for Machine Learning Applications
Computational Optimal Transport for Machine Learning Reading Group Over the last few years, optimal transport (OT) has quickly become a central topic
Some experiments with tennis player aging curves using Hilbert space GPs in PyMC. Only experimental for now.
NOTE: This is still being developed! Setup notes This document uses Jeff Sackmann's tennis data. You can obtain it as follows: git clone https://githu
HairCLIP: Design Your Hair by Text and Reference Image
Overview This repository hosts the official PyTorch implementation of the paper: "HairCLIP: Design Your Hair by Text and Reference Image". Our single
Single Red Blood Cell Hydrodynamic Traps Via the Generative Design
Rbc-traps-generative-design - The generative design for single red clood cell hydrodynamic traps using GEFEST framework
PrimaryBid - Transform application Lifecycle Data and Design and ETL pipeline architecture for ingesting data from multiple sources to redshift
Transform application Lifecycle Data and Design and ETL pipeline architecture for ingesting data from multiple sources to redshift This project is composed of two parts: Part1 and Part2
Supply Chain will be a SAAS platfom to provide e-logistic facilites with most optimal
Shipp It Welcome To Supply Chain App [ Shipp It ] In "Shipp It" we are creating a full solution[web+app] for a entire supply chain from receiving orde
Pyjiting is a experimental Python-JIT compiler, which is the product of my undergraduate thesis
Pyjiting is a experimental Python-JIT compiler, which is the product of my undergraduate thesis. The goal is to implement a light-weight miniature general-purpose Python JIT compiler.
Webcash is an experimental e-cash (electronic cash)
Webcash Webcash is an experimental new electronic cash ("e-cash") that enables decentralized and instant payments to anyone, anywhere in the world. Us
Course on computational design, non-linear optimization, and dynamics of soft systems at UIUC.
Computational Design and Dynamics of Soft Systems · This is a repository that contains the source code for generating the lecture notes, handouts, exe
Aircraft design optimization made fast through modern automatic differentiation
Aircraft design optimization made fast through modern automatic differentiation. Plug-and-play analysis tools for aerodynamics, propulsion, structures, trajectory design, and much more.
Experimental musig2 python code, not for production use!
musig2-py Experimental musig2 python code, not for production use! This is just for testing things out. All public keys are encoded as 32 bytes, assum
💊 A 3D Generative Model for Structure-Based Drug Design (NeurIPS 2021)
A 3D Generative Model for Structure-Based Drug Design Coming soon... Citation @inproceedings{luo2021sbdd, title={A 3D Generative Model for Structu
To Design and Implement Logistic Regression to Classify Between Benign and Malignant Cancer Types
To Design and Implement Logistic Regression to Classify Between Benign and Malignant Cancer Types, from a Database Taken From Dr. Wolberg reports his Clinic Cases.
An algorithm that can solve the word puzzle Wordle with an optimal number of guesses on HARD mode.
WordleSolver An algorithm that can solve the word puzzle Wordle with an optimal number of guesses on HARD mode. How to use the program Copy this proje
The GUI application by Python3.8. Using QT Design draw UI and generator UI XML file provides to PySide2 build GUI components
The GUI application by Python3.8. Using QT Design draw UI and generator UI XML file provides to PySide2 build GUI components. Total adopt OOD design class, service, and abstract class. OOP implemented this project.
To design and implement the Identification of Iris Flower species using machine learning using Python and the tool Scikit-Learn.
To design and implement the Identification of Iris Flower species using machine learning using Python and the tool Scikit-Learn.
Implementation for Homogeneous Unbalanced Regularized Optimal Transport
HUROT: An Homogeneous formulation of Unbalanced Regularized Optimal Transport. This repository provides code related to this preprint. This is an alph
Logistic Bandit experiments. Official code for the paper "Jointly Efficient and Optimal Algorithms for Logistic Bandits".
Code for the paper Jointly Efficient and Optimal Algorithms for Logistic Bandits, by Louis Faury, Marc Abeille, Clément Calauzènes and Kwang-Sun Jun.
This package implements the algorithms introduced in Smucler, Sapienza, and Rotnitzky (2020) to compute optimal adjustment sets in causal graphical models.
optimaladj: A library for computing optimal adjustment sets in causal graphical models This package implements the algorithms introduced in Smucler, S
Optimal Camera Position for a Practical Application of Gaze Estimation on Edge Devices,
Optimal Camera Position for a Practical Application of Gaze Estimation on Edge Devices, Linh Van Ma, Tin Trung Tran, Moongu Jeon, ICAIIC 2022 (The 4th
WebCash is an experimental new electronic cash ("e-cash") that enables decentralized and instant payments to anyone
Webcash WebCash is an experimental new electronic cash ("e-cash") that enables decentralized and instant payments to anyone, anywhere in the world. Us
An optimal solution finder for the game Wordle, written in Python
wordle-solver: a nearly-optimal computer player for Wordle Wordle is an interesting word guessing game. This program plays it very well, taking only 3
Python bindings for Basler's VisualApplets TCL script generation
About visualapplets.py The Basler AG company provides a TCL scripting engine to automatize the creation of VisualApplets designs (a former Silicon Sof
Design-by-contract in Python3 with informative violation messages and inheritance
icontract icontract provides design-by-contract to Python3 with informative violation messages and inheritance. It also gives a base for a flourishing
This is a passport scanning web service to help you scan, identify and validate your passport created with a simple and flexible design and ready to be integrated right into your system!
Passport-Recogniton-System This is a passport scanning web service to help you scan, identify and validate your passport created with a simple and fle
Python algorithm to determine the optimal elevation threshold of a GNSS receiver, by using a statistical test known as the Brown-Forsynthe test.
Levene and Brown-Forsynthe: Test for variances Application to Global Navigation Satellite Systems (GNSS) Python algorithm to determine the optimal ele
Benchmarks for Model-Based Optimization
Design-Bench Design-Bench is a benchmarking framework for solving automatic design problems that involve choosing an input that maximizes a black-box
The official implementation of paper "Finding the Task-Optimal Low-Bit Sub-Distribution in Deep Neural Networks" (IJCV under review).
DGMS This is the code of the paper "Finding the Task-Optimal Low-Bit Sub-Distribution in Deep Neural Networks". Installation Our code works with Pytho
Ml-design-patterns - Source code accompanying O'Reilly book: Machine Learning Design Patterns
This is not an official Google product ml-design-patterns Source code accompanying O'Reilly book: Title: Machine Learning Design Patterns Authors: Val
Technical_indicators_cryptos - Using technical indicators to find optimal trading strategies to deploy onto trading bot.
technical_indicators_cryptos Using technical indicators to find optimal trading strategies to deploy onto trading bot. In the Jup Notebook you wil
Yoloxkeypointsegment - An anchor-free version of YOLO, with a simpler design but better performance
Introduction 关键点版本:已完成 全景分割版本:已完成 实例分割版本:已完成 YOLOX is an anchor-free version of
Code for "Retrieving Black-box Optimal Images from External Databases" (WSDM 2022)
Retrieving Black-box Optimal Images from External Databases (WSDM 2022) We propose how a user retreives an optimal image from external databases of we
A Python library for common tasks on 3D point clouds
Point Cloud Utils (pcu) - A Python library for common tasks on 3D point clouds Point Cloud Utils (pcu) is a utility library providing the following fu
A wrapper around the python Tkinter library for customizable and modern ui-elements in Tkinter
CustomTkinter With CustomTkinter you can create modern looking user interfaces in python with tkinter. CustomTkinter is a tkinter extension which prov
A simple electrical network analyzer, BASED ON computer-aided design.
Electrical Network Analyzer A simple electrical network analyzer. Given the oriented graph of the electrical network (circut), BASED ON computer-aided
Simple and Robust Loss Design for Multi-Label Learning with Missing Labels
Simple and Robust Loss Design for Multi-Label Learning with Missing Labels Official PyTorch Implementation of the paper Simple and Robust Loss Design
A python package that computes an optimal motion plan for approaching a red light
redlight_approach redlight_approach is a Python package that computes an optimal motion plan during traffic light approach. RLA_demo.mov Given the par
Design by contract for Python. Write bug-free code. Add a few decorators, get static analysis and tests for free.
A Python library for design by contract (DbC) and checking values, exceptions, and side-effects. In a nutshell, deal empowers you to write bug-free co
Flask Boilerplate - Paper Kit Design | AppSeed
Flask Paper Kit Open-Source Web App coded in Flask Framework - Provided by AppSeed Web App Generator. App Features: SQLite database SQLAlchemy ORM Ses
A set of tests for evaluating large-scale algorithms for Wasserstein-2 transport maps computation.
Continuous Wasserstein-2 Benchmark This is the official Python implementation of the NeurIPS 2021 paper Do Neural Optimal Transport Solvers Work? A Co
Test scripts etc. for experimental rollup testing
rollup node experiments Test scripts etc. for experimental rollup testing. untested, work in progress python -m venv venv source venv/bin/activate #
objectfactory is a python package to easily implement the factory design pattern for object creation, serialization, and polymorphism
py-object-factory objectfactory is a python package to easily implement the factory design pattern for object creation, serialization, and polymorphis
Simple alternative to Doodle polls and scheduling (Python 3, Django 3, JavaScript)
What is jawanndenn? jawanndenn is a simple web application to schedule meetings and run polls, a libre alternative to Doodle. It is using the followin
This code provides a PyTorch implementation for OTTER (Optimal Transport distillation for Efficient zero-shot Recognition), as described in the paper.
Data Efficient Language-Supervised Zero-Shot Recognition with Optimal Transport Distillation This repository contains PyTorch evaluation code, trainin
Repository for the paper "Optimal Subarchitecture Extraction for BERT"
Bort Companion code for the paper "Optimal Subarchitecture Extraction for BERT." Bort is an optimal subset of architectural parameters for the BERT ar
Simple yet powerful CAD (Computer Aided Design) library, written with Python.
Py-MADCAD it's time to throw parametric softwares out ! Simple yet powerful CAD (Computer Aided Design) library, written with Python. Installation
A FAIR dataset of TCV experimental results for validating edge/divertor turbulence models.
TCV-X21 validation for divertor turbulence simulations Quick links Intro Welcome to TCV-X21. We're glad you've found us! This repository is designed t
Flask Boilerplate - Material Kit Design | AppSeed
Flask Boilerplate - Material Kit Design | AppSeed
Django Boilerplate - Material Kit Design | AppSeed
Django Boilerplate - Material Kit Design | AppSeed
Minimal authorization through OO design and pure Ruby classes
Pundit Pundit provides a set of helpers which guide you in leveraging regular Ruby classes and object oriented design patterns to build a simple, robu
HairCLIP: Design Your Hair by Text and Reference Image
Overview This repository hosts the official PyTorch implementation of the paper: "HairCLIP: Design Your Hair by Text and Reference Image". Our single
An ETL framework + Monitoring UI/API (experimental project for learning purposes)
Fastlane An ETL framework for building pipelines, and Flask based web API/UI for monitoring pipelines. Project structure fastlane |- fastlane: (ETL fr
State-of-the-art NLP through transformer models in a modular design and consistent APIs.
Trapper (Transformers wRAPPER) Trapper is an NLP library that aims to make it easier to train transformer based models on downstream tasks. It wraps h
Systemic Evolutionary Chemical Space Exploration for Drug Discovery
SECSE SECSE: Systemic Evolutionary Chemical Space Explorer Chemical space exploration is a major task of the hit-finding process during the pursuit of
A concise but complete implementation of CLIP with various experimental improvements from recent papers
x-clip (wip) A concise but complete implementation of CLIP with various experimental improvements from recent papers Install $ pip install x-clip Usag
A concise but complete implementation of CLIP with various experimental improvements from recent papers
x-clip (wip) A concise but complete implementation of CLIP with various experimental improvements from recent papers Install $ pip install x-clip Usag
RID-Noise: Towards Robust Inverse Design under Noisy Environments
This is code of RID-Noise. Reproduce RID-Noise Results Toy tasks Please refer to the notebook ridnoise.ipynb to view experiments on three toy tasks. B
Unofficial implementation of "Coordinate Attention for Efficient Mobile Network Design"
Unofficial implementation of "Coordinate Attention for Efficient Mobile Network Design". CoordAttention tensorflow slim
A design of MIDI language for music generation task, specifically for Natural Language Processing (NLP) models.
MIDI Language Introduction Reference Paper: Pop Music Transformer: Beat-based Modeling and Generation of Expressive Pop Piano Compositions: code This
An Integrated Experimental Platform for time series data anomaly detection.
Curve Sorry to tell contributors and users. We decided to archive the project temporarily due to the employee work plan of collaborators. There are no
Explicable Reward Design for Reinforcement Learning Agents [NeurIPS'21]
Explicable Reward Design for Reinforcement Learning Agents [NeurIPS'21]
Removing Inter-Experimental Variability from Functional Data in Systems Neuroscience
Removing Inter-Experimental Variability from Functional Data in Systems Neuroscience This repository is the official implementation of [https://www.bi
Implementation of Pooling by Sliced-Wasserstein Embedding (NeurIPS 2021)
PSWE: Pooling by Sliced-Wasserstein Embedding (NeurIPS 2021) PSWE is a permutation-invariant feature aggregation/pooling method based on sliced-Wasser
Verification of Monty Hall problem by experimental simulation.
Verification of Monty Hall problem by experimental simulation. |中文|English| In the process of learning causal inference, I learned about the Monty Hal
The official colors of the FAU as matplotlib/seaborn colormaps
FAU - Colors The official colors of Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU) as matplotlib / seaborn colormaps. We support the old colo
Testability-Aware Low Power Controller Design with Evolutionary Learning, ITC2021
Testability-Aware Low Power Controller Design with Evolutionary Learning This repo contains the source code of Testability-Aware Low Power Controller
BinTuner is a cost-efficient auto-tuning framework, which can deliver a near-optimal binary code that reveals much more differences than -Ox settings.
BinTuner is a cost-efficient auto-tuning framework, which can deliver a near-optimal binary code that reveals much more differences than -Ox settings. it also can assist the binary code analysis research in generating more diversified datasets for training and testing. The BinTuner framework is based on OpenTuner, thanks to all contributors for their contributions.