Python Genetic-data Resources

ND DIAL: Imbalanced Algorithms Minimalist Python-based implementations of algorithms for imbalanced learning. Includes deep and representational learn

imbalanced-learn imbalanced-learn is a python package offering a number of re-sampling techniques commonly used in datasets showing strong between-cla

MLBox is a powerful Automated Machine Learning python library. It provides the following features: Fast reading and distributed data preprocessing/cle

Master status: Development status: Package information: TPOT stands for Tree-based Pipeline Optimization Tool. Consider TPOT your Data Science Assista

Prophet: Automatic Forecasting Procedure Prophet is a procedure for forecasting time series data based on an additive model where non-linear trends ar

tslearn The machine learning toolkit for time series analysis in Python Section Description Installation Installing the dependencies and tslearn Getti

pyGAM Generalized Additive Models in Python. Documentation Official pyGAM Documentation: Read the Docs Building interpretable models with Generalized

[Due to the time taken @ uni, work + hell breaking loose in my life, since things have calmed down a bit, will continue commiting!!!] [By the way, I'm

Mlxtend (machine learning extensions) is a Python library of useful tools for the day-to-day data science tasks. Sebastian Raschka 2014-2021 Links Doc

dlib C++ library Dlib is a modern C++ toolkit containing machine learning algorithms and tools for creating complex software in C++ to solve real worl

What is xLearn? xLearn is a high performance, easy-to-use, and scalable machine learning package that contains linear model (LR), factorization machin

ark_invest daily weekday report of @arkinvest ETF activity + data collection This script was created to: Extract and save daily csv's from ARKInvest's

Lidar-data-decode In this project, you can decode your lidar data frame(pcap file) and make your own datasets(test dataset) in Windows without any hug

Introduction Yield explorer is a WIP! I needed a tool that would show me historical data and performance of my staked crypto but was unable to find a

Deep Illuminator Deep Illuminator is a data augmentation tool designed for image relighting. It can be used to easily and efficiently genera

Ultra-Data-Efficient GAN Training: Drawing A Lottery Ticket First, Then Training It Toughly Code for this paper Ultra-Data-Efficient GAN Tra

Orange Data Mining Orange is a data mining and visualization toolbox for novice and expert alike. To explore data with Orange, one requires no program

Mayavi: 3D visualization of scientific data in Python Mayavi docs: http://docs.enthought.com/mayavi/mayavi/ TVTK docs: http://docs.enthought.com/mayav

The latest information about Galaxy can be found on the Galaxy Community Hub. Community support is available at Galaxy Help. Galaxy Quickstart Galaxy

CKAN: The Open Source Data Portal Software CKAN is the world’s leading open-source data portal platform. CKAN makes it easy to publish, share and work

an interactive explorer for single-cell transcriptomics data cellxgene (pronounced "cell-by-gene") is an interactive data explorer for single-cell tra

A Python library that helps data scientists to infer causation rather than observing correlation.

Collaborate This is a web application for managing and building stories based on tips solicited from the public. This project is meant to be easy to s

Website • Docs • Blog • Twitter • Chat (Community & Support) • Tutorial • Mailing List Data Version Control or DVC is an open-source tool for data sci

Collaborate This is a web application for managing and building stories based on tips solicited from the public. This project is meant to be easy to s

Introduction Apiestas is a project composed of a backend powered by the awesome framework FastAPI and a crawler powered by Scrapy. This project has fo

This open source project serves two purposes. Collection and evaluation of a Question Answering dataset to improve existing QA/search methods - COVID-

MazeRL is an application oriented Deep Reinforcement Learning (RL) framework, addressing real-world decision problems. Our vision is to cover the complete development life cycle of RL applications ranging from simulation engineering up to agent development, training and deployment.

Data Visualizer for Super Mario Kart (SNES)

Algo-Phantom-Backend 💻 Algo-Phantoms-Backend is an Application that provides pathways and quizzes along with a code editor to help you towards your D

Boltons boltons should be builtins. Boltons is a set of over 230 BSD-licensed, pure-Python utilities in the same spirit as — and yet conspicuously mis

A PyTorch implementation of "Pathfinder Discovery Networks for Neural Message Passing" (WebConf 2021). Abstract In this work we propose Pathfind

SeaLion is designed to teach today's aspiring ml-engineers the popular machine learning concepts of today in a way that gives both intuition and ways of application. We do this through concise algorithms that do the job in the least jargon possible and examples to guide you through every step of the way.

Official code to reproduce the results and data presented in the paper Contrastive Learning Inverts the Data Generating Process.

ForecastGA is a tool that combines a couple of popular libraries, Atspy and googleanalytics, with a few enhancements.

A package to aggregate gridded data in xarray to polygons in geopandas using area-weighting from the relative area overlaps between pixels and polygons. Check out the binder link above for a sample code run!

OpenClubhouse-Worker This is a simple worker for OpenClubhouse to sync CH channel data.

gensim – Topic Modelling in Python Gensim is a Python library for topic modelling, document indexing and similarity retrieval with large corpora. Targ

Texar is a toolkit aiming to support a broad set of machine learning, especially natural language processing and text generation tasks. Texar provides

Scattertext 0.1.0.0 A tool for finding distinguishing terms in corpora and displaying them in an interactive HTML scatter plot. Points corresponding t

Basic Utilities for PyTorch Natural Language Processing (NLP) PyTorch-NLP, or torchnlp for short, is a library of basic utilities for PyTorch NLP. tor

FlashText This module can be used to replace keywords in sentences or extract keywords from sentences. It is based on the FlashText algorithm. Install

Haystack is an end-to-end framework that enables you to build powerful and production-ready pipelines for different search use cases. Whether you want

An Apache 2.0 NLP research library, built on PyTorch, for developing state-of-the-art deep learning models on a wide variety of linguistic tasks. Quic

torchtext This repository consists of: torchtext.data: Generic data loaders, abstractions, and iterators for text (including vocabulary and word vecto

spaCy: Industrial-strength NLP spaCy is a library for advanced Natural Language Processing in Python and Cython. It's built on the very latest researc

ivis Implementation of the ivis algorithm as described in the paper Structure-preserving visualisation of high dimensional single-cell datasets. Ivis

pivottablejs: the Python module Drag’n’drop Pivot Tables and Charts for Jupyter/IPython Notebook, care of PivotTable.js Installation pip install pivot

plotnine Latest Release License DOI Build Status Coverage Documentation plotnine is an implementation of a grammar of graphics in Python, it is based

PyWaffle PyWaffle is an open source, MIT-licensed Python package for plotting waffle charts. It provides a Figure constructor class Waffle, which coul

animatplot A python package for making interactive as well as animated plots with matplotlib. Requires Python = 3.5 Matplotlib = 2.2 (because slider

Lets-Plot Lets-Plot is an open-source plotting library for statistical data. It is implemented using the Kotlin programming language. The design of Le

In-depth EDA (target analysis, comparison, feature analysis, correlation) in two lines of code! Sweetviz is an open-source Python library that generat

HiPlot - High dimensional Interactive Plotting HiPlot is a lightweight interactive visualization tool to help AI researchers discover correlations and

JoyPy JoyPy is a one-function Python package based on matplotlib + pandas with a single purpose: drawing joyplots (a.k.a. ridgeline plots). The code f

Introduction The facets project contains two visualizations for understanding and analyzing machine learning datasets: Facets Overview and Facets Dive

Chartify Chartify is a Python library that makes it easy for data scientists to create charts. Why use Chartify? Consistent input data format: Spend l

"To deal with hyper-planes in a 14 dimensional space, visualize a 3D space and say 'fourteen' very loudly. Everyone does it." - Geoff Hinton Overview

Perspective is an interactive visualization component for large, real-time datasets. Originally developed for J.P. Morgan's trading business, Perspect

TensorFlow Data Validation TensorFlow Data Validation (TFDV) is a library for exploring and validating machine learning data. It is designed to be hig

missingno Messy datasets? Missing values? missingno provides a small toolset of flexible and easy-to-use missing data visualizations and utilities tha

Turn even the largest data into images, accurately Build Status Coverage Latest dev release Latest release Docs Support What is it? Datashader is a da

HoloViews Stop plotting your data - annotate your data and let it visualize itself. HoloViews is an open-source Python library designed to make data a

PyQtGraph A pure-Python graphics library for PyQt5/PyQt6/PySide2/PySide6 Copyright 2020 Luke Campagnola, University of North Carolina at Chapel Hill h

UMAP Uniform Manifold Approximation and Projection (UMAP) is a dimension reduction technique that can be used for visualisation similarly to t-SNE, bu

Pandas Profiling Documentation | Slack | Stack Overflow Generates profile reports from a pandas DataFrame. The pandas df.describe() function is great

Bokeh is an interactive visualization library for modern web browsers. It provides elegant, concise construction of versatile graphics, and affords hi

Dash Dash is the most downloaded, trusted Python framework for building ML & data science web apps. Built on top of Plotly.js, React and Flask, Dash t

seaborn: statistical data visualization Seaborn is a Python visualization library based on matplotlib. It provides a high-level interface for drawing

A Python library for audio feature extraction, classification, segmentation and applications This doc contains general info. Click here for the comple

Audiomentations A Python library for audio data augmentation. Inspired by albumentations. Useful for deep learning. Runs on CPU. Supports mono audio a

torchaudio: an audio library for PyTorch The aim of torchaudio is to apply PyTorch to the audio domain. By supporting PyTorch, torchaudio follows the

AUDIOMATE Audiomate is a library for easy access to audio datasets. It provides the datastructures for accessing/loading different datasets in a gener

tinytag tinytag is a library for reading music meta data of MP3, OGG, OPUS, MP4, M4A, FLAC, WMA and Wave files with python Install pip install tinytag

Jupter Notebook REST API Run your jupyter notebooks as a REST API endpoint. This isn't a jupyter server but rather just a way to run your notebooks as

starlette context Middleware for Starlette that allows you to store and access the context data of a request. Can be used with logging so logs automat

UA-GEC: Grammatical Error Correction and Fluency Corpus for the Ukrainian Language This repository contains UA-GEC data and an accompanying Python lib

Tab Transformer Implementation of Tab Transformer, attention network for tabular data, in Pytorch. This simple architecture came within a hair's bread

BlobHunter A tool for scanning Azure blob storage accounts for publicly opened blobs. BlobHunter is a part of "Hunting Azure Blobs Exposes Millions of

PyTorch Tabular aims to make Deep Learning with Tabular data easy and accessible to real-world cases and research alike.

COVID-19 vaccination data at subnational level. To ensure its officiality, the source data is carefully verified.

This is a Pytorch implementation of the paper: Self-Supervised Graph Transformer on Large-Scale Molecular Data.

gensim – Topic Modelling in Python Gensim is a Python library for topic modelling, document indexing and similarity retrieval with large corpora. Targ

Texar is a toolkit aiming to support a broad set of machine learning, especially natural language processing and text generation tasks. Texar provides

Scattertext 0.1.0.0 A tool for finding distinguishing terms in corpora and displaying them in an interactive HTML scatter plot. Points corresponding t

Basic Utilities for PyTorch Natural Language Processing (NLP) PyTorch-NLP, or torchnlp for short, is a library of basic utilities for PyTorch NLP. tor

FlashText This module can be used to replace keywords in sentences or extract keywords from sentences. It is based on the FlashText algorithm. Install

An Apache 2.0 NLP research library, built on PyTorch, for developing state-of-the-art deep learning models on a wide variety of linguistic tasks. Quic

torchtext This repository consists of: torchtext.data: Generic data loaders, abstractions, and iterators for text (including vocabulary and word vecto

spaCy: Industrial-strength NLP spaCy is a library for advanced Natural Language Processing in Python and Cython. It's built on the very latest researc

ivis Implementation of the ivis algorithm as described in the paper Structure-preserving visualisation of high dimensional single-cell datasets. Ivis

pivottablejs: the Python module Drag’n’drop Pivot Tables and Charts for Jupyter/IPython Notebook, care of PivotTable.js Installation pip install pivot

plotnine Latest Release License DOI Build Status Coverage Documentation plotnine is an implementation of a grammar of graphics in Python, it is based

PyWaffle PyWaffle is an open source, MIT-licensed Python package for plotting waffle charts. It provides a Figure constructor class Waffle, which coul

animatplot A python package for making interactive as well as animated plots with matplotlib. Requires Python = 3.5 Matplotlib = 2.2 (because slider

Lets-Plot Lets-Plot is an open-source plotting library for statistical data. It is implemented using the Kotlin programming language. The design of Le

In-depth EDA (target analysis, comparison, feature analysis, correlation) in two lines of code! Sweetviz is an open-source Python library that generat

HiPlot - High dimensional Interactive Plotting HiPlot is a lightweight interactive visualization tool to help AI researchers discover correlations and

JoyPy JoyPy is a one-function Python package based on matplotlib + pandas with a single purpose: drawing joyplots (a.k.a. ridgeline plots). The code f

Introduction The facets project contains two visualizations for understanding and analyzing machine learning datasets: Facets Overview and Facets Dive