Python Graph-algorithms Resources

gqueue gqueue is a CLI (command line interface) tool that computes carbon footprint of HPC computations on clusters running slurm. It follows the meth

EZ-Graph EZ Graph is a GUI that allows users to make and train neural networks without writing a single line of code. Requirements python 3 pandas num

TorchSeg This project aims at providing a fast, modular reference implementation for semantic segmentation models using PyTorch. Highlights Modular De

Federated Learning with Non-IID Data This is an implementation of the following paper: Yue Zhao, Meng Li, Liangzhen Lai, Naveen Suda, Damon Civin, Vik

GATER This repository contains the code for our EMNLP 2021 paper “Heterogeneous Graph Neural Networks for Keyphrase Generation”. Our implementation is

GraphWar: Arms Race in Graph Adversarial Learning NOTE: GraphWar is still in the early stages and the API will likely continue to change. 🚀 Installat

GOAT A paper using optimal transport to solve the graph matching problem. https://arxiv.org/abs/2111.05366 Repo structure .github: Files specifying ho

isvd Official implementation of NeurIPS'21: Implicit SVD for Graph Representation Learning If you find this code useful, you may cite us as: @inprocee

Climate Modeling with Neural Diffusion Equation Introduction This is the repository of our accepted ICDM 2021 paper "Climate Modeling with Neural Diff

My Dynamic Programming Algorithms giraycoskun [email protected] It is a repo for various dynamic programming algorithms for exercise.

Distribution System Model Calibration Algorithms The code in this library was developed by Sandia National Laboratories under funding provided by the

SGTL - Spectral Graph Theory Library SGTL is a python library of spectral graph theory methods. The library is still very new and so there are many fe

ICS-Visualizer is an interactive Industrial Control Systems (ICS) network graph that contains up-to-date ICS metadata (Name, company, port, user manua

Overview Metrinome is an all-purpose tool for working with code complexity metrics. It can be used as both a REPL and API, and includes: Converters to

Py2neo Py2neo is a client library and toolkit for working with Neo4j from within Python applications. The library supports both Bolt and HTTP and prov

Cold Brew: Distilling Graph Node Representations with Incomplete or Missing Neighborhoods Introduction Graph Neural Networks (GNNs) have demonstrated

MassFormer This is the original implementation of MassFormer, a graph transformer for small molecule MS/MS prediction. Check out the preprint on arxiv

Homepage | Paper | Datasets | Leaderboard | Documentation Graph Robustness Benchmark (GRB) provides scalable, unified, modular, and reproducible evalu

Polypharmacy - DDI - Synergy Survey The Survey Paper This repository accompanies our survey paper A Unified View of Relational Deep Learning for Polyp

GDN A tensorflow=1.13 implementation of Deconvolutional Networks on Graph Data (NeurIPS 2021) Abstract In this paper, we consider an inverse problem i

Parameterising Simulated Annealing for the Travelling Salesman Problem

SGMNet Implementation PyTorch implementation of SGMNet for ICCV'21 paper "Learning to Match Features with Seeded Graph Matching Network", by Hongkai C

Adversarial Attacks on Knowledge Graph Embeddings via Instance Attribution Methods This is the code repository to accompany the EMNLP 2021 paper on ad

CaGCN This repo is for source code of NeurIPS 2021 paper "Be Confident! Towards Trustworthy Graph Neural Networks via Confidence Calibration". Paper L

UAV-Networks Simulator - Autonomous Networking - A.A. 20/21 UAV-Networks-Routing is a Python simulator for experimenting routing algorithms and mac pr

Polypharmacy - DDI - Synergy Survey The Survey Paper This repository accompanies our survey paper A Unified View of Relational Deep Learning for Polyp

ADGCL : Adversarial Graph Augmentation to Improve Graph Contrastive Learning Introduction This repo contains the Pytorch [1] implementation of Adversa

Parameterising Simulated Annealing for the Travelling Salesman Problem Abstract The Travelling Salesman Problem is a well known NP-Hard problem. Given

Learning Graph Cellular Automata This code implements the experiments from the NeurIPS 2021 paper: "Learning Graph Cellular Automata" Daniele Grattaro

Deep Learning Algorithms for Hedging with Frictions This repository contains the Forward-Backward Stochastic Differential Equation (FBSDE) solver and

Graph-Refined Convolutional Network for Multimedia Recommendation with Implicit Feedback This is our Pytorch implementation for the paper: Yinwei Wei,

batch-bandits Implementation of popular bandit algorithms in batch environments. Source code to our paper "The Impact of Batch Learning in Stochastic

RHGN Source code for CIKM 2021 paper for Relation-aware Heterogeneous Graph for User Profiling Dependencies torch==1.6.0 torchvision==0.7.0 dgl==0.7.1

Association Rules Mining Using Python Implementation of association rules mining algorithms (Apriori|FPGrowth) using python. As a part of hw1 code in

Cold Brew: Distilling Graph Node Representations with Incomplete or Missing Neighborhoods Introduction Graph Neural Networks (GNNs) have demonstrated

duality Data science, Data manipulation and Machine learning package. Use permitted according to the terms of use and conditions set by the attached l

scikit-multimodallearn is a Python package implementing algorithms multimodal data. It is compatible with scikit-learn, a popul

PECOS - Predictions for Enormous and Correlated Output Spaces PECOS is a versatile and modular machine learning (ML) framework for fast learning and i

Edge Independent Graph Models Code for the paper: "On the Power of Edge Independent Graph Models" Sudhanshu Chanpuriya, Cameron Musco, Konstantinos So

IGCN : Image-to-graph convolutional network IGCN is a learning framework for 2D/3D deformable model registration and alignment, and shape reconstructi

RMNA: A Neighbor Aggregation-Based Knowledge Graph Representation Learning Model Using Rule Mining Our code is based on Learning Attention-based Embed

Data and Code for paper Outlining and Filling: Hierarchical Query Graph Generation for Answering Complex Questions over Knowledge Graph is available f

DSP: Trajectory Prediction with Graph-based Dual-scale Context Fusion Introduction This is the project page of the paper Lu Zhang, Peiliang Li, Jing C

Planning Algorithms in AI and Robotics course T2 2021-22 The Planning Algorithms in AI and Robotics course at Skoltech, MS in Data Science, during T2,

Bioinformatics This is a repository of all the algorithms covered in the Bioinformatics Course part of the Cambridge Computer Science Tripos Algorithm

Diverse Motion Stylization (Official) This is the official Pytorch implementation of this paper. Diverse Motion Stylization for Multiple Style Domains

DiscoNet: Learning Distilled Collaboration Graph for Multi-Agent Perception [NeurIPS 2021] Yiming Li, Shunli Ren, Pengxiang Wu, Siheng Chen, Chen Feng

A large-scale database for graph representation learning

LILLIE: Information Extraction and Database Integration Using Linguistics and Learning-Based Algorithms Based on the work by Smith et al. (2021) Query

dbv Decision Border Visualizer for Classification Algorithms Project description A python package for Machine Learning Engineers who want to visualize

UltraGCN This is our Pytorch implementation for our CIKM 2021 paper: Kelong Mao, Jieming Zhu, Xi Xiao, Biao Lu, Zhaowei Wang, Xiuqiang He. UltraGCN: A

GBK-GNN: Gated Bi-Kernel Graph Neural Networks for Modeling Both Homophily and Heterophily Abstract Graph Neural Networks (GNNs) are widely used on a

Digital Twin Mobility Profiling: A Spatio-Temporal Graph Learning Approach This is the implementation of traffic prediction code in DTMP based on PyTo

stock-graph-python Simple GUI python app to show a stocks graph performance. Made with Matplotlib and Tiingo. Tiingo API Key You will need to add your

Programming-Foundations-Algorithms Algorithms purpose to solve a specific proplem with a sequential sets of steps for instance : if you need to add di

Visualize sorting algorithms A simple python application to visualize sorting algorithms. Sort Algorithms Name Function Name O( ) Bubble Sort bubble_s

Fast and Easy-to-use Distributed Graph Learning for PyTorch Geometric

Ansible Playbook Grapher ansible-playbook-grapher is a command line tool to create a graph representing your Ansible playbook plays, tasks and roles.

Graph Regularized Residual Subspace Clustering Network for hyperspectral image clustering

Heterogeneous Temporal Graph Neural Network This repository contains the datasets and source code of HTGNN. run_mag.ipynb is the training and testing

Learning Graph Cellular Automata This code implements the experiments from the NeurIPS 2021 paper: "Learning Graph Cellular Automata" Daniele Grattaro

BMVC 2021 BI-GConv: Boundary-Aware Input-Dependent Graph Convolution for Biomedical Image Segmentation Necassary Dependencies: PyTorch 1.2.0 Python 3.

VACA Code repository for the paper "VACA: Designing Variational Graph Autoencoders for Interventional and Counterfactual Queries (arXiv)". The impleme

Rot-Pro : Modeling Transitivity by Projection in Knowledge Graph Embedding This repository contains the source code for the Rot-Pro model, presented a

Node Dependent Local Smoothing for Scalable Graph Learning Requirements Environments: Xeon Gold 5120 (CPU), 384GB(RAM), TITAN RTX (GPU), Ubuntu 16.04

SparseCard Code for approximate graph reduction techniques for cardinality-based DSFM, from paper "Approximate Decomposable Submodular Function Minimi

Implementation for On Provable Benefits of Depth in Training Graph Convolutional Networks Setup This implementation is based on PyTorch = 1.0.0. Smal

SMORE: Knowledge Graph Completion and Multi-hop Reasoning in Massive Knowledge Graphs SMORE is a a versatile framework that scales multi-hop query emb

Hierarchical User Intent Graph Network for Multimedia Recommendation This is our Pytorch implementation for the paper: Hierarchical User Intent Graph

Video Matting via Consistency-Regularized Graph Neural Networks Project Page | Real Data | Paper Installation Our code has been tested on Python 3.7,

Covid-19 Test AI (Deep Learning - NNs) Software I developed a segmentation algorithm to understand whether Covid-19 Test Photos are positive or negati

This is an Unbiased Learning To Rank Algorithms (ULTRA) toolbox, which provides a codebase for experiments and research on learning to rank with human annotated or noisy labels.

Predicting lncRNA–protein interactions based on graph autoencoders and collaborative training Code for our paper "Predicting lncRNA–protein interactio

Nested Graph Neural Networks About Nested Graph Neural Network (NGNN) is a general framework to improve a base GNN's expressive power and performance.

Exponential Graph is Provably Efficient for Decentralized Deep Training This code repository is for the paper Exponential Graph is Provably Efficient

The HIST framework for stock trend forecasting The implementation of the paper "HIST: A Graph-based Framework for Stock Trend Forecasting via Mining C

This repository contains the Matlab implementations for the following multi-target filtering/tracking algorithms: - Folder PMBM contains the implemen

Driving Style Recognition Using Interval Type-2 Fuzzy Inference System and Multiple Experts Decision Making Created by Iago Pachêco Gomes at USP - ICM

Data Structure and Algorithm : Want to learn data strutrues and algorithms ??? Then Stop thinking more and start to learn today. This repo will help y

The HIST framework for stock trend forecasting The implementation of the paper "HIST: A Graph-based Framework for Stock Trend Forecasting via Mining C

Directed Graph Contrastive Learning The PyTorch implementation of Directed Graph Contrastive Learning (DiGCL). In this paper, we present the first con

A PyTorch Implementation of GGNN This is a PyTorch implementation of the Gated Graph Sequence Neural Networks (GGNN) as described in the paper Gated G

toy_gradlogp This repo implements some toy examples of the following score matching algorithms in PyTorch: ssm-vr: sliced score matching with variance

Word Counter By EBUS Coding Club Count the frequency of letters or words in a text file and show a graph. Requirements Python 3.9 or higher matplotlib

DPGNN This repository is an official PyTorch(Geometric) implementation of DPGNN(DPGCN) in "Distance-wise Prototypical Graph Neural Network for Node Im

DyGED Dynamic Graph Event Detection Get Started pip install -r requirements.txt TODO Paper link to arxiv, and how to cite. Twitter Weather dataset tra

IQNAS: Interpretable Integer Quadratic programming Neural Architecture Search Realistic use of neural networks often requires adhering to multiple con

HMemNetworks Code and documentation for Harmonic Memory Networks, a series of models for compositionally assembling representations of graph elements

Random-walk Embedding Framework This repository is a reference implementation of the random-walk embedding framework as described in the paper: A Broa

CoVA: Context-aware Visual Attention for Webpage Information Extraction Abstract Webpage information extraction (WIE) is an important step to create k

Assessing the Influence of Models on the Performance of Reinforcement Learning Algorithms applied on Continuous Control Tasks This is the master thesi

Rce-KGQA A novel pipeline framework for multi-hop complex KGQA task. This framework mainly contains two modules, answering_filtering_module and relati

MRefG Wanli Li and Tieyun Qian: "Exploit a Multi-head Reference Graph for Semi-supervised Relation Extraction", IJCNN 2021 1. Requirements To reproduc

Auto-Baby-Cry-Detection-with-Music-Player A simple voice detection system which can be applied practically for designing a device with capability to d

CodingSimplified_GK This repository is aimed at creating a One stop Destination of codes of all Data structures and Algorithms along with basic explai

TesohhCrypt TesohhCrypt is a zero-dependency Cryptography Python Module, with a method that i made. (likely someone already made a similar one, but i

Neo4j Movies Application: Quick Start This example application demonstrates how easy it is to get started with Neo4j in Python. It is a very simple we

MCGC Description This is the code of "Multi-view Contrastive Graph Clustering" in NeurlPS 2021. Datasets Results ACM DBLP IMDB Amazon photos Amazon co

Djag Scheduler (Dj)ango Task D(AG) (Scheduler) Overview Djag scheduler associates scheduling information with celery tasks The task schedule is persis

Spatial-Temporal Transformer for Dynamic Scene Graph Generation Pytorch Implementation of our paper Spatial-Temporal Transformer for Dynamic Scene Gra