Python Graph-drawing Resources

GATER This repository contains the code for our EMNLP 2021 paper “Heterogeneous Graph Neural Networks for Keyphrase Generation”. Our implementation is

GraphWar: Arms Race in Graph Adversarial Learning NOTE: GraphWar is still in the early stages and the API will likely continue to change. 🚀 Installat

GOAT A paper using optimal transport to solve the graph matching problem. https://arxiv.org/abs/2111.05366 Repo structure .github: Files specifying ho

isvd Official implementation of NeurIPS'21: Implicit SVD for Graph Representation Learning If you find this code useful, you may cite us as: @inprocee

Climate Modeling with Neural Diffusion Equation Introduction This is the repository of our accepted ICDM 2021 paper "Climate Modeling with Neural Diff

SGTL - Spectral Graph Theory Library SGTL is a python library of spectral graph theory methods. The library is still very new and so there are many fe

ICS-Visualizer is an interactive Industrial Control Systems (ICS) network graph that contains up-to-date ICS metadata (Name, company, port, user manua

Overview Metrinome is an all-purpose tool for working with code complexity metrics. It can be used as both a REPL and API, and includes: Converters to

Py2neo Py2neo is a client library and toolkit for working with Neo4j from within Python applications. The library supports both Bolt and HTTP and prov

Cold Brew: Distilling Graph Node Representations with Incomplete or Missing Neighborhoods Introduction Graph Neural Networks (GNNs) have demonstrated

MassFormer This is the original implementation of MassFormer, a graph transformer for small molecule MS/MS prediction. Check out the preprint on arxiv

Homepage | Paper | Datasets | Leaderboard | Documentation Graph Robustness Benchmark (GRB) provides scalable, unified, modular, and reproducible evalu

Polypharmacy - DDI - Synergy Survey The Survey Paper This repository accompanies our survey paper A Unified View of Relational Deep Learning for Polyp

GDN A tensorflow=1.13 implementation of Deconvolutional Networks on Graph Data (NeurIPS 2021) Abstract In this paper, we consider an inverse problem i

superSFS This is a tool for speculation of ancestral allel, calculation of sfs and drawing its bar plot. It is easy-to-use and runing fast. What you s

SGMNet Implementation PyTorch implementation of SGMNet for ICCV'21 paper "Learning to Match Features with Seeded Graph Matching Network", by Hongkai C

Styled text-to-drawing synthesis method. Featured at the 2021 NeurIPS Workshop on Machine Learning for Creativity and Design

Adversarial Attacks on Knowledge Graph Embeddings via Instance Attribution Methods This is the code repository to accompany the EMNLP 2021 paper on ad

CaGCN This repo is for source code of NeurIPS 2021 paper "Be Confident! Towards Trustworthy Graph Neural Networks via Confidence Calibration". Paper L

Polypharmacy - DDI - Synergy Survey The Survey Paper This repository accompanies our survey paper A Unified View of Relational Deep Learning for Polyp

ADGCL : Adversarial Graph Augmentation to Improve Graph Contrastive Learning Introduction This repo contains the Pytorch [1] implementation of Adversa

Learning Graph Cellular Automata This code implements the experiments from the NeurIPS 2021 paper: "Learning Graph Cellular Automata" Daniele Grattaro

Graph-Refined Convolutional Network for Multimedia Recommendation with Implicit Feedback This is our Pytorch implementation for the paper: Yinwei Wei,

RHGN Source code for CIKM 2021 paper for Relation-aware Heterogeneous Graph for User Profiling Dependencies torch==1.6.0 torchvision==0.7.0 dgl==0.7.1

Cold Brew: Distilling Graph Node Representations with Incomplete or Missing Neighborhoods Introduction Graph Neural Networks (GNNs) have demonstrated

Edge Independent Graph Models Code for the paper: "On the Power of Edge Independent Graph Models" Sudhanshu Chanpuriya, Cameron Musco, Konstantinos So

IGCN : Image-to-graph convolutional network IGCN is a learning framework for 2D/3D deformable model registration and alignment, and shape reconstructi

RMNA: A Neighbor Aggregation-Based Knowledge Graph Representation Learning Model Using Rule Mining Our code is based on Learning Attention-based Embed

Data and Code for paper Outlining and Filling: Hierarchical Query Graph Generation for Answering Complex Questions over Knowledge Graph is available f

DSP: Trajectory Prediction with Graph-based Dual-scale Context Fusion Introduction This is the project page of the paper Lu Zhang, Peiliang Li, Jing C

Diverse Motion Stylization (Official) This is the official Pytorch implementation of this paper. Diverse Motion Stylization for Multiple Style Domains

DiscoNet: Learning Distilled Collaboration Graph for Multi-Agent Perception [NeurIPS 2021] Yiming Li, Shunli Ren, Pengxiang Wu, Siheng Chen, Chen Feng

A large-scale database for graph representation learning

UltraGCN This is our Pytorch implementation for our CIKM 2021 paper: Kelong Mao, Jieming Zhu, Xi Xiao, Biao Lu, Zhaowei Wang, Xiuqiang He. UltraGCN: A

GBK-GNN: Gated Bi-Kernel Graph Neural Networks for Modeling Both Homophily and Heterophily Abstract Graph Neural Networks (GNNs) are widely used on a

Digital Twin Mobility Profiling: A Spatio-Temporal Graph Learning Approach This is the implementation of traffic prediction code in DTMP based on PyTo

stock-graph-python Simple GUI python app to show a stocks graph performance. Made with Matplotlib and Tiingo. Tiingo API Key You will need to add your

Fast and Easy-to-use Distributed Graph Learning for PyTorch Geometric

Ansible Playbook Grapher ansible-playbook-grapher is a command line tool to create a graph representing your Ansible playbook plays, tasks and roles.

Graph Regularized Residual Subspace Clustering Network for hyperspectral image clustering

Drawing Robust Scratch Tickets: Subnetworks with Inborn Robustness Are Found within Randomly Initialized Networks Yonggan Fu, Qixuan Yu, Yang Zhang, S

Heterogeneous Temporal Graph Neural Network This repository contains the datasets and source code of HTGNN. run_mag.ipynb is the training and testing

Learning Graph Cellular Automata This code implements the experiments from the NeurIPS 2021 paper: "Learning Graph Cellular Automata" Daniele Grattaro

BMVC 2021 BI-GConv: Boundary-Aware Input-Dependent Graph Convolution for Biomedical Image Segmentation Necassary Dependencies: PyTorch 1.2.0 Python 3.

VACA Code repository for the paper "VACA: Designing Variational Graph Autoencoders for Interventional and Counterfactual Queries (arXiv)". The impleme

Rot-Pro : Modeling Transitivity by Projection in Knowledge Graph Embedding This repository contains the source code for the Rot-Pro model, presented a

Node Dependent Local Smoothing for Scalable Graph Learning Requirements Environments: Xeon Gold 5120 (CPU), 384GB(RAM), TITAN RTX (GPU), Ubuntu 16.04

SparseCard Code for approximate graph reduction techniques for cardinality-based DSFM, from paper "Approximate Decomposable Submodular Function Minimi

Implementation for On Provable Benefits of Depth in Training Graph Convolutional Networks Setup This implementation is based on PyTorch = 1.0.0. Smal

SMORE: Knowledge Graph Completion and Multi-hop Reasoning in Massive Knowledge Graphs SMORE is a a versatile framework that scales multi-hop query emb

Hierarchical User Intent Graph Network for Multimedia Recommendation This is our Pytorch implementation for the paper: Hierarchical User Intent Graph

Video Matting via Consistency-Regularized Graph Neural Networks Project Page | Real Data | Paper Installation Our code has been tested on Python 3.7,

Predicting lncRNA–protein interactions based on graph autoencoders and collaborative training Code for our paper "Predicting lncRNA–protein interactio

Nested Graph Neural Networks About Nested Graph Neural Network (NGNN) is a general framework to improve a base GNN's expressive power and performance.

Exponential Graph is Provably Efficient for Decentralized Deep Training This code repository is for the paper Exponential Graph is Provably Efficient

The HIST framework for stock trend forecasting The implementation of the paper "HIST: A Graph-based Framework for Stock Trend Forecasting via Mining C

The HIST framework for stock trend forecasting The implementation of the paper "HIST: A Graph-based Framework for Stock Trend Forecasting via Mining C

Directed Graph Contrastive Learning The PyTorch implementation of Directed Graph Contrastive Learning (DiGCL). In this paper, we present the first con

A PyTorch Implementation of GGNN This is a PyTorch implementation of the Gated Graph Sequence Neural Networks (GGNN) as described in the paper Gated G

Word Counter By EBUS Coding Club Count the frequency of letters or words in a text file and show a graph. Requirements Python 3.9 or higher matplotlib

DPGNN This repository is an official PyTorch(Geometric) implementation of DPGNN(DPGCN) in "Distance-wise Prototypical Graph Neural Network for Node Im

DyGED Dynamic Graph Event Detection Get Started pip install -r requirements.txt TODO Paper link to arxiv, and how to cite. Twitter Weather dataset tra

HMemNetworks Code and documentation for Harmonic Memory Networks, a series of models for compositionally assembling representations of graph elements

Random-walk Embedding Framework This repository is a reference implementation of the random-walk embedding framework as described in the paper: A Broa

CoVA: Context-aware Visual Attention for Webpage Information Extraction Abstract Webpage information extraction (WIE) is an important step to create k

Rce-KGQA A novel pipeline framework for multi-hop complex KGQA task. This framework mainly contains two modules, answering_filtering_module and relati

MRefG Wanli Li and Tieyun Qian: "Exploit a Multi-head Reference Graph for Semi-supervised Relation Extraction", IJCNN 2021 1. Requirements To reproduc

Neo4j Movies Application: Quick Start This example application demonstrates how easy it is to get started with Neo4j in Python. It is a very simple we

MCGC Description This is the code of "Multi-view Contrastive Graph Clustering" in NeurlPS 2021. Datasets Results ACM DBLP IMDB Amazon photos Amazon co

Djag Scheduler (Dj)ango Task D(AG) (Scheduler) Overview Djag scheduler associates scheduling information with celery tasks The task schedule is persis

Spatial-Temporal Transformer for Dynamic Scene Graph Generation Pytorch Implementation of our paper Spatial-Temporal Transformer for Dynamic Scene Gra

graph_SSL Self-supervised learning on Graph Representation Learning (node-level task) How to run the code To run GRACE, sh run_GRACE.sh To run GCA, sh

Key Information Extraction from Scanned Invoices Key information extraction from invoice document with Graph Convolution Network Related blog post fro

blender_freestyle_line_drawing This is simply repo for line drawing rendering using freestyle in Blender. how to use blender2935 --background --python

Batoms is a Python package for editing and rendering atoms and molecules objects using blender. A Python interface that allows for automating workflows.

Resilient UAV Swarm Communications with Graph Convolutional Neural Network This repository contains the source codes of Resilient UAV Swarm Communicat

LMSOC: An Approach for Socially Sensitive Pretraining Code for reproducing the paper LMSOC: An Approach for Socially Sensitive Pretraining to appear a

stock-graph-python Simple CLI python app to show a stocks graph performance. Made with Matplotlib and Tiingo. Tiingo API Key You will need to add your

What is Retentioneering? Retentioneering is a Python framework and library to assist product analysts and marketing analysts as it makes it easier to

Code for the paper "PICK: Processing Key Information Extraction from Documents using Improved Graph Learning-Convolutional Networks" (ICPR 2020)

Graph Mining Author: Jiayi Chen Time: April 2021 Implemented Algorithms: Network: Scrabing Data, Network Construbtion and Network Measurement (e.g., P

Scene Graph Benchmark in PyTorch 1.7 This project is based on maskrcnn-benchmark Highlights Upgrad to pytorch 1.7 Multi-GPU training and inference Bat

MTDM Temporal Knowledge Graph Reasoning Triggered by Memories To alleviate the time dependence, we propose a memory-triggered decision-making (MTDM) n

MIA GNN Project Starter If you meet the version mismatch error for Lasagne library, please use following command to upgrade Lasagne library. pip insta

Edge Rewiring Goes Neural: Boosting Network Resilience via Policy Gradient This repository is the official PyTorch implementation of "Edge Rewiring Go

Graph2SMILES A graph-to-sequence model for one-step retrosynthesis and reaction outcome prediction. 1. Environmental setup System requirements Ubuntu:

Learning to Learn Graph Topologies This is the official code of L2G, Unrolling and Recurrent Unrolling in Learning to Learn Graph Topologies. Requirem

VLG-Net: Video-Language Graph Matching Networks for Video Grounding Introduction Official repository for VLG-Net: Video-Language Graph Matching Networ

FairGo WWW2021 Learning Fair Representations for Recommendation: A Graph-based Perspective As a key application of artificial intelligence, recommende

FairGNN A PyTorch implementation of "Say No to the Discrimination: Learning Fair Graph Neural Networks with Limited Sensitive Attribute Information" (

Dependencies NOTE: This code has been updated, if you were using this repo earlier and experienced issues that was due to an outaded codebase. Please

Reinforcement Knowledge Graph Reasoning for Explainable Recommendation This repository contains the source code of the SIGIR 2019 paper "Reinforcement

Jointly Learning Explainable Rules for Recommendation with Knowledge Graph

Accuracy-Diversity Trade-off in Recommender Systems via Graph Convolutions This repository contains the code of the paper "Accuracy-Diversity Trade-of

DGCN This is the official implementation of our WWW'21 paper: Yu Zheng, Chen Gao, Liang Chen, Depeng Jin, Yong Li, DGCN: Diversified Recommendation wi

DMBGN: Deep Multi-Behaviors Graph Networks for Voucher Redemption Rate Prediction The implementation of the accepted paper "Deep Multi-Behaviors Graph

GHCF This is our implementation of the paper: Chong Chen, Weizhi Ma, Min Zhang, Zhaowei Wang, Xiuqiang He, Chenyang Wang, Yiqun Liu and Shaoping Ma. 2

HeroGRAPH Code for my ORSUM @ RecSys 2020, HeroGRAPH: A Heterogeneous Graph Framework for Multi-Target Cross-Domain Recommendation Paper, workshop pro

Bi-TGCF Tensorflow Implementation of BiTGCF： Cross Domain Recommendation via Bi-directional Transfer Graph Collaborative Filtering Networks. in CIKM20

hierarchical_fashion_graph_network This is our Tensorflow implementation for the paper: Xingchen Li, Xiang Wang, Xiangnan He, Long Chen, Jun Xiao, and