Python Graph-mining Resources

OANet implementation Pytorch implementation of OANet for ICCV'19 paper "Learning Two-View Correspondences and Geometry Using Order-Aware Network", by

Calculator 🖩 A simple calculator written in python allows you to make simple calculations, write charts, calculate the dates, and exchange currency.

SPTAG: A library for fast approximate nearest neighbor search SPTAG SPTAG (Space Partition Tree And Graph) is a library for large scale vector approxi

This repository holds the implementation for paper Towards Open-World Feature Extrapolation: An Inductive Graph Learning Approach Download our preproc

Parameterized Hypercomplex Graph Neural Networks (PHC-GNNs) PHC-GNNs (Le et al., 2021): https://arxiv.org/abs/2103.16584 PHM Linear Layer Illustration

SSR (NeurIPS 2021) Pytorch implementation of paper "Re-ranking for image retrieval and transductivefew-shot classification" [Paper] [Project webpage]

SAGCN - Official PyTorch Implementation | Paper | Project Page This is the official implementation of the paper "Steganographer detection via a simila

g2o - General Graph Optimization Linux: Windows: g2o is an open-source C++ framework for optimizing graph-based nonlinear error functions. g2o has bee

ADGC: Awesome Deep Graph Clustering ADGC is a collection of state-of-the-art (SOTA), novel deep graph clustering methods (papers, codes and datasets).

Orbitals in Python A small collection of tools made by me, that you can use to visualize atomic orbitals in both 2D and 3D in different aspects, and o

SURGE: Sequential Recommendation with Graph Neural Networks This is our TensorFlow implementation for the paper: Sequential Recommendation with Graph

MassFormer This is the original implementation of MassFormer, a graph transformer for small molecule MS/MS prediction. Check out the preprint on arxiv

ChebLieNet: Invariant spectral graph NNs turned equivariant by Riemannian geometry on Lie groups Hugo Aguettaz, Erik J. Bekkers, Michaël Defferrard We

Dynamic-Graphs-Construction Official Codes for Graph Modularity:Towards Understanding the Cross-Layer Transition of Feature Representations in Deep Ne

2s-AGCN Two-Stream Adaptive Graph Convolutional Networks for Skeleton-Based Action Recognition in CVPR19 Note PyTorch version should be 0.3! For PyTor

Command line utilities for tabular data files This is a set of command line utilities for manipulating large tabular data files. Files of numeric and

Fine-grained Sentiment Analysis as Dependency Graph Parsing This repository contains the code and datasets described in following paper: Fine-grained

SwisE Switch spaces for knowledge graph embeddings. Requirements: python3 pytorch numpy tqdm Reproduce the results To reproduce the reported results,

Graph Convolutional Gated Recurrent Neural Network (GCGRNN) Improved from Graph Convolutional Neural Networks with Data-driven Graph Filter (GCNN-DDGF

Feature Engineering & Feature Selection A comprehensive guide [pdf] [markdown] for Feature Engineering and Feature Selection, with implementations and

Overview of OpenPNM OpenPNM is a comprehensive framework for performing pore network simulations of porous materials. More Information For more detail

Pigment The problem of partitioning up a skincare regime into parts such that each part does not interfere with itself is equivalent to the minimal cl

Code has been run on Google Colab, thanks Google for providing computational resources Contents Natural Language Processing（自然语言处理） Text Classificati

Ohm-s-Law-Visualizer It's an application to calculate I from v and r using Ohm's Law. It can also plot a graph between V vs I. Story I'm doing my Unde

Implementing Graph Convolutional Networks and Information Retrieval Mechanisms using pure Python and NumPy

GN-Transformer AST This is the official repository for the paper "GN-Transformer: Fusing AST and Source Code information in Graph Networks". Data Prep

English | 简体中文 Latest News 2021.10.25 Paper "Docking-based Virtual Screening with Multi-Task Learning" is accepted by BIBM 2021. 2021.07.29 PaddleHeli

GemNet: Universal Directional Graph Neural Networks for Molecules Reference implementation in PyTorch of the geometric message passing neural network

TensorFlow GNN This is an early (alpha) release to get community feedback. It's under active development and we may break API compatibility in the fut

Some tentative models that incorporate label propagation to graph neural networks for graph representation learning in nodes, links or graphs.

Housegan-data-reader House-GAN++ (data-reader) Code and instructions for converting rplan dataset (raster images) to housegan++ data format. House-GAN

Graph Nets library Graph Nets is DeepMind's library for building graph networks in Tensorflow and Sonnet. Contact [email protected] for comments a

pyclustering is a Python, C++ data mining library (clustering algorithm, oscillatory networks, neural networks). The library provides Python and C++ implementations (C++ pyclustering library) of each algorithm or model. C++ pyclustering library is a part of pyclustering and supported for Linux, Windows and MacOS operating systems.

FCPS Fundamental Clustering Problems Suite The package provides over sixty state-of-the-art clustering algorithms for unsupervised machine learning pu

GENDIS GENetic DIscovery of Shapelets In the time series classification domain, shapelets are small subseries that are discriminative for a certain cl

CG3 This is the repository for the AAAI 21 paper [Contrastive and Generative Graph Convolutional Networks for Graph-based Semi-Supervised Learning]. R

Mining the Stack Overflow Developer Survey A prototype data mining application to compare the accuracy of decision tree and random forest regression m

Time2box Implementation of [Time in a Box: Advancing Knowledge Graph Completion with Temporal Scopes].

HaloGraphNet Predict halo masses from simulations via Graph Neural Networks. Given a dark matter halo and its galaxies, creates a graph with informati

Interpreting Language Models Through Knowledge Graph Extraction Idea: How do we interpret what a language model learns at various stages of training?

DeepSTD: Mining Spatio-temporal Disturbances of Multiple Context Factors for Citywide Traffic Flow Prediction This is the implementation of DeepSTD in

Introduction MASS allows you to search a time series for a subquery resulting in an array of distances. These array of distances enable you to identif

Examples of techniques for training interpretable ML models, explaining ML models, and debugging ML models for accuracy, discrimination, and security.

EZ-Graph EZ Graph is a GUI that allows users to make and train neural networks without writing a single line of code. Requirements python 3 pandas num

GATER This repository contains the code for our EMNLP 2021 paper “Heterogeneous Graph Neural Networks for Keyphrase Generation”. Our implementation is

GraphWar: Arms Race in Graph Adversarial Learning NOTE: GraphWar is still in the early stages and the API will likely continue to change. 🚀 Installat

GOAT A paper using optimal transport to solve the graph matching problem. https://arxiv.org/abs/2111.05366 Repo structure .github: Files specifying ho

isvd Official implementation of NeurIPS'21: Implicit SVD for Graph Representation Learning If you find this code useful, you may cite us as: @inprocee

Climate Modeling with Neural Diffusion Equation Introduction This is the repository of our accepted ICDM 2021 paper "Climate Modeling with Neural Diff

SGTL - Spectral Graph Theory Library SGTL is a python library of spectral graph theory methods. The library is still very new and so there are many fe

ICS-Visualizer is an interactive Industrial Control Systems (ICS) network graph that contains up-to-date ICS metadata (Name, company, port, user manua

Overview Metrinome is an all-purpose tool for working with code complexity metrics. It can be used as both a REPL and API, and includes: Converters to

Py2neo Py2neo is a client library and toolkit for working with Neo4j from within Python applications. The library supports both Bolt and HTTP and prov

Cold Brew: Distilling Graph Node Representations with Incomplete or Missing Neighborhoods Introduction Graph Neural Networks (GNNs) have demonstrated

MassFormer This is the original implementation of MassFormer, a graph transformer for small molecule MS/MS prediction. Check out the preprint on arxiv

Homepage | Paper | Datasets | Leaderboard | Documentation Graph Robustness Benchmark (GRB) provides scalable, unified, modular, and reproducible evalu

Polypharmacy - DDI - Synergy Survey The Survey Paper This repository accompanies our survey paper A Unified View of Relational Deep Learning for Polyp

GDN A tensorflow=1.13 implementation of Deconvolutional Networks on Graph Data (NeurIPS 2021) Abstract In this paper, we consider an inverse problem i

Mining Crypto with Tesla Solar and Powerwalls This script turns a crypto miner on and off when the Tesla Powerwall level drops/rises above a certain t

SGMNet Implementation PyTorch implementation of SGMNet for ICCV'21 paper "Learning to Match Features with Seeded Graph Matching Network", by Hongkai C

Mining Latent Classes for Few-shot Segmentation Lihe Yang, Wei Zhuo, Lei Qi, Yinghuan Shi, Yang Gao. This codebase contains baseline of our paper Mini

Adversarial Attacks on Knowledge Graph Embeddings via Instance Attribution Methods This is the code repository to accompany the EMNLP 2021 paper on ad

CaGCN This repo is for source code of NeurIPS 2021 paper "Be Confident! Towards Trustworthy Graph Neural Networks via Confidence Calibration". Paper L

Polypharmacy - DDI - Synergy Survey The Survey Paper This repository accompanies our survey paper A Unified View of Relational Deep Learning for Polyp

ADGCL : Adversarial Graph Augmentation to Improve Graph Contrastive Learning Introduction This repo contains the Pytorch [1] implementation of Adversa

Learning Graph Cellular Automata This code implements the experiments from the NeurIPS 2021 paper: "Learning Graph Cellular Automata" Daniele Grattaro

Summary This is the source code for the paper "A Case Study and Qualitative Analysis of Simple Cross-Lingual Opinion Mining", which was accepted as fu

Graph-Refined Convolutional Network for Multimedia Recommendation with Implicit Feedback This is our Pytorch implementation for the paper: Yinwei Wei,

RHGN Source code for CIKM 2021 paper for Relation-aware Heterogeneous Graph for User Profiling Dependencies torch==1.6.0 torchvision==0.7.0 dgl==0.7.1

Association Rules Mining Using Python Implementation of association rules mining algorithms (Apriori|FPGrowth) using python. As a part of hw1 code in

Cold Brew: Distilling Graph Node Representations with Incomplete or Missing Neighborhoods Introduction Graph Neural Networks (GNNs) have demonstrated

LP-Option-Hedging Description A Python program to analyze leveraged liquidity farming/mining and find the optimal option combination for hedging imper

Edge Independent Graph Models Code for the paper: "On the Power of Edge Independent Graph Models" Sudhanshu Chanpuriya, Cameron Musco, Konstantinos So

IGCN : Image-to-graph convolutional network IGCN is a learning framework for 2D/3D deformable model registration and alignment, and shape reconstructi

RMNA: A Neighbor Aggregation-Based Knowledge Graph Representation Learning Model Using Rule Mining Our code is based on Learning Attention-based Embed

Data and Code for paper Outlining and Filling: Hierarchical Query Graph Generation for Answering Complex Questions over Knowledge Graph is available f

MIRCO PyTorch implementation for paper: Latent Structures Mining with Contrastive Modality Fusion for Multimedia Recommendation Dependencies Python 3.

DSP: Trajectory Prediction with Graph-based Dual-scale Context Fusion Introduction This is the project page of the paper Lu Zhang, Peiliang Li, Jing C

Diverse Motion Stylization (Official) This is the official Pytorch implementation of this paper. Diverse Motion Stylization for Multiple Style Domains

DiscoNet: Learning Distilled Collaboration Graph for Multi-Agent Perception [NeurIPS 2021] Yiming Li, Shunli Ren, Pengxiang Wu, Siheng Chen, Chen Feng

A large-scale database for graph representation learning

Enhancing Knowledge Tracing via Adversarial Training This repository contains source code for the paper "Enhancing Knowledge Tracing via Adversarial T

UltraGCN This is our Pytorch implementation for our CIKM 2021 paper: Kelong Mao, Jieming Zhu, Xi Xiao, Biao Lu, Zhaowei Wang, Xiuqiang He. UltraGCN: A

GBK-GNN: Gated Bi-Kernel Graph Neural Networks for Modeling Both Homophily and Heterophily Abstract Graph Neural Networks (GNNs) are widely used on a

Digital Twin Mobility Profiling: A Spatio-Temporal Graph Learning Approach This is the implementation of traffic prediction code in DTMP based on PyTo

stock-graph-python Simple GUI python app to show a stocks graph performance. Made with Matplotlib and Tiingo. Tiingo API Key You will need to add your

Fast and Easy-to-use Distributed Graph Learning for PyTorch Geometric

Ansible Playbook Grapher ansible-playbook-grapher is a command line tool to create a graph representing your Ansible playbook plays, tasks and roles.

Graph Regularized Residual Subspace Clustering Network for hyperspectral image clustering

Heterogeneous Temporal Graph Neural Network This repository contains the datasets and source code of HTGNN. run_mag.ipynb is the training and testing

Learning Graph Cellular Automata This code implements the experiments from the NeurIPS 2021 paper: "Learning Graph Cellular Automata" Daniele Grattaro

BMVC 2021 BI-GConv: Boundary-Aware Input-Dependent Graph Convolution for Biomedical Image Segmentation Necassary Dependencies: PyTorch 1.2.0 Python 3.

VACA Code repository for the paper "VACA: Designing Variational Graph Autoencoders for Interventional and Counterfactual Queries (arXiv)". The impleme

Rot-Pro : Modeling Transitivity by Projection in Knowledge Graph Embedding This repository contains the source code for the Rot-Pro model, presented a

Node Dependent Local Smoothing for Scalable Graph Learning Requirements Environments: Xeon Gold 5120 (CPU), 384GB(RAM), TITAN RTX (GPU), Ubuntu 16.04

SparseCard Code for approximate graph reduction techniques for cardinality-based DSFM, from paper "Approximate Decomposable Submodular Function Minimi

Implementation for On Provable Benefits of Depth in Training Graph Convolutional Networks Setup This implementation is based on PyTorch = 1.0.0. Smal

SMORE: Knowledge Graph Completion and Multi-hop Reasoning in Massive Knowledge Graphs SMORE is a a versatile framework that scales multi-hop query emb

Hierarchical User Intent Graph Network for Multimedia Recommendation This is our Pytorch implementation for the paper: Hierarchical User Intent Graph

Video Matting via Consistency-Regularized Graph Neural Networks Project Page | Real Data | Paper Installation Our code has been tested on Python 3.7,