Python Kaggle-sartorius-cell-instance-segmentation-solution Resources

PyTorch Semantic Segmentation Introduction This repository is a PyTorch implementation for semantic segmentation / scene parsing. The code is easy to

Complete-IoU Loss and Cluster-NMS for Improving Object Detection and Instance Segmentation. Our paper is accepted by IEEE Transactions on Cybernetics

Whale Demo Instance: Bigquery Public Data This is a fully-functioning demo instance of the whale data catalog, actively scraping data from Bigquery's

Scanpy – Single-Cell Analysis in Python Scanpy is a scalable toolkit for analyzing single-cell gene expression data built jointly with anndata. It inc

Detectron2 trained on PubLayNet dataset This repo contains the training configurations, code and trained models trained on PubLayNet dataset using Det

BMaskR-CNN This code is developed on Detectron2 Boundary-preserving Mask R-CNN ECCV 2020 Tianheng Cheng, Xinggang Wang, Lichao Huang, Wenyu Liu Video

BiMix The code for Bi-Mix: Bidirectional Mixing for Domain Adaptive Nighttime Semantic Segmentation arxiv Framework: visualization results: Requiremen

A Python library to create single or multi Instance-based Learning (IBL) agents that are built based on Instance Based Learning Theory (IBLT) 1 Instal

ClevrTex This repository contains dataset generation code for ClevrTex benchmark from paper: ClevrTex: A Texture-Rich Benchmark for Unsupervised Multi

SwinTransformer + OBBDet The sixth place winning solution (6/220) in the track of Fine-grained Object Recognition in High-Resolution Optical Images, 2

CFPNet-M: A Light-Weight Encoder-Decoder Based Network for Multimodal Biomedical Image Real-Time Segmentation This repository contains the implementat

Introduction The field of connectomics aims to reconstruct the wiring diagram of the brain by mapping the neural connections at the level of individua

SegDistill: Toolbox for Knowledge Distillation on Semantic Segmentation Networks This repo contains the supported code and configuration files for Seg

Scripts for "Current best-practices in single-cell RNA-seq: a tutorial" This repository is complementary to the publication: M.D. Luecken, F.J. Theis,

Cellpose | A generalist algorithm for cell and nucleus segmentation. Cellpose was written by Carsen Stringer and Marius Pachitariu. To learn about Cel

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MIT Deep Learning This repository is a collection of tutorials for MIT Deep Learning courses. More added as courses progress. Tutorial: Deep Learning

DGPNet - Dense Gaussian Processes for Few-Shot Segmentation Welcome to the public repository for DGPNet. The paper is available at arxiv: https://arxi

SAPNet This repository contains the official Pytorch implementation of the paper: "SAPNet: Segmentation-Aware Progressive Network for Perceptual Contr

Point-Unet This is an unofficial implementation of the MICCAI 2021 paper Point-Unet: A Context-Aware Point-Based Neural Network for Volumetric Segment

UTNet (Accepted at MICCAI 2021) Official implementation of UTNet: A Hybrid Transformer Architecture for Medical Image Segmentation Introduction Transf

vieCap4H Challenge 2021: A transformer-based method for Healthcare Image Captioning in Vietnamese This repo GitHub contains our solution for vieCap4H

Code for paper "Context-self contrastive pretraining for crop type semantic segmentation" Setting up a python environment Follow the instruction in ht

iterseg napari plugin for iteratively improving unet-watershed segmentation This napari plugin was generated with Cookiecutter using @napari's cookiec

SimpleDet - A Simple and Versatile Framework for Object Detection and Instance Recognition Major Features FP16 training for memory saving and up to 2.

Computer Vision Annotation Tool (CVAT) CVAT is free, online, interactive video and image annotation tool for computer vision. It is being used by our

This is the code used in the paper "Entity Embeddings of Categorical Variables". If you want to get the original version of the code used for the Kagg

PhenoGraph for Python3 PhenoGraph is a clustering method designed for high-dimensional single-cell data. It works by creating a graph ("network") repr

JBHI-Pytorch This repository contains a reference implementation of the algorithms described in our paper "Self-supervised Multi-modal Hybrid Fusion N

🎓 UniHub API UniHub API is my solution to bringing students and their universities closer... By joining UniHub, students will be able to join their r

Welcome to Official repository of deepflash2 - a deep-learning pipeline for segmentation of ambiguous microscopic images. Quick Start in 30 seconds se

Session-aware Item-combination Recommendation with Transformer Network 2nd place (0.39224) code and report for IEEE BigData Cup 2021 Track1 Report EDA

ObjProp Introduction This is the official implementation of the paper "Object Propagation via Inter-Frame Attentions for Temporally Stable Video Insta

D²Conv3D: Dynamic Dilated Convolutions for Object Segmentation in Videos This repository contains the implementation for "D²Conv3D: Dynamic Dilated Co

NoCodeSeg: Deep segmentation made easy! This is the official repository for the manuscript "Code-free development and deployment of deep segmentation

Suture detection PyTorch This repo contains the reference implementation of suture detection model in PyTorch for the paper Point detection through mu

FASA: Feature Augmentation and Sampling Adaptation for Long-Tailed Instance Segmentation (ICCV 2021) This repository contains the implementation of th

[CVPRW 2021] - Object Propagation via Inter-Frame Attentions for Temporally Stable Video Instance Segmentation

Data science Python notebooks: Deep learning (TensorFlow, Theano, Caffe, Keras), scikit-learn, Kaggle, big data (Spark, Hadoop MapReduce, HDFS), matplotlib, pandas, NumPy, SciPy, Python essentials, AWS, and various command lines.

EZ-Graph EZ Graph is a GUI that allows users to make and train neural networks without writing a single line of code. Requirements python 3 pandas num

GSCNN This is the official code for: Gated-SCNN: Gated Shape CNNs for Semantic Segmentation Towaki Takikawa, David Acuna, Varun Jampani, Sanja Fidler

PortraitNet Code for the paper "PortraitNet: Real-time portrait segmentation network for mobile device". @ CAD&Graphics 2019 Introduction We propose a

FastFCN: Rethinking Dilated Convolution in the Backbone for Semantic Segmentation [Project] [Paper] [arXiv] [Home] Official implementation of FastFCN:

PyTorch implementation of UNet++ (Nested U-Net) This repository contains code for a image segmentation model based on UNet++: A Nested U-Net Architect

Extreme Lightwegith Portrait Segmentation Please go to this link to download code Requirements python 3 pytorch = 0.4.1 torchvision==0.2.1 opencv-pyt

DFANet This repo is an unofficial pytorch implementation of DFANet:Deep Feature Aggregation for Real-Time Semantic Segmentation log 2019.4.16 After 48

Medical Image Segmentation with Guided Attention This repository contains the code of our paper: "'Multi-scale self-guided attention for medical image

ConvCRF This repository contains the reference implementation for our proposed Convolutional CRFs in PyTorch (Tensorflow planned). The two main entry-

UPSNet: A Unified Panoptic Segmentation Network Introduction UPSNet is initially described in a CVPR 2019 oral paper. Disclaimer This repository is te

High-resolution networks and Segmentation Transformer for Semantic Segmentation Branches This is the implementation for HRNet + OCR. The PyTroch 1.1 v

Fast-SCNN: Fast Semantic Segmentation Network Unofficial implementation of the model architecture of Fast-SCNN. Real-time Semantic Segmentation and mo

CCNet: Criss-Cross Attention for Semantic Segmentation Paper Links: Our most recent TPAMI version with improvements and extensions (Earlier ICCV versi

ESPNet: Efficient Spatial Pyramid of Dilated Convolutions for Semantic Segmentation This repository contains the source code of our paper, ESPNet (acc

face-parsing.PyTorch Contents Training Demo References Training Prepare training data: -- download CelebAMask-HQ dataset -- change file path in the pr

TorchSeg This project aims at providing a fast, modular reference implementation for semantic segmentation models using PyTorch. Highlights Modular De

Implementation for paper LadderNet: Multi-path networks based on U-Net for medical image segmentation This implementation is based on orobix implement

ShelfNet-lightweight for paper (ShelfNet for fast semantic segmentation) This repo contains implementation of ShelfNet-lightweight models for real-tim

Dual Attention Network for Scene Segmentation(CVPR2019) Jun Fu, Jing Liu, Haijie Tian, Yong Li, Yongjun Bao, Zhiwei Fang,and Hanqing Lu Introduction W

Attention Gated Networks (Image Classification & Segmentation) Pytorch implementation of attention gates used in U-Net and VGG-16 models. The framewor

TuSimple-DUC by Panqu Wang, Pengfei Chen, Ye Yuan, Ding Liu, Zehua Huang, Xiaodi Hou, and Garrison Cottrell. Introduction This repository is for Under

Learning to Adapt Structured Output Space for Semantic Segmentation Pytorch implementation of our method for adapting semantic segmentation from the s

Real-time Semantic Segmentation Comparative Study The repository contains the official TensorFlow code used in our papers: RTSEG: REAL-TIME SEMANTIC S

Pixel Transposed Convolutional Networks Created by Hongyang Gao, Hao Yuan, Zhengyang Wang and Shuiwang Ji at Texas A&M University. Introduction Pixel

Semantic Segmentation using Adversarial Networks Requirements Chainer (1.23.0) Differences Use of FCN-VGG16 instead of Dilated8 as Segmentor. Caution

Segmentation-Aware Convolutional Networks Using Local Attention Masks [Project Page] [Paper] Segmentation-aware convolution filters are invariant to b

KittiSeg KittiSeg performs segmentation of roads by utilizing an FCN based model. The model achieved first place on the Kitti Road Detection Benchmark

Laplacian Pyramid Reconstruction and Refinement for Semantic Segmentation This repository contains code and models for the method described in: Golnaz

Full-Resolution Residual Networks (FRRN) This repository contains code to train and qualitatively evaluate Full-Resolution Residual Networks (FRRNs) a

Tensorflow implementation of Learning Deconvolution Network for Semantic Segmentation. Install Instructions Works with tensorflow 1.11.0 and uses the

DeconvNet: Learning Deconvolution Network for Semantic Segmentation Created by Hyeonwoo Noh, Seunghoon Hong and Bohyung Han at POSTECH Acknowledgement

PSPNet with PyTorch Unofficial implementation of "Pyramid Scene Parsing Network" (https://arxiv.org/abs/1612.01105). This repository is just for caffe

PSPNet_tensorflow Important Code is fine for inference. However, the training code is just for reference and might be only used for fine-tuning. If yo

PSPNet This is an unofficial implementation of Pyramid Scene Parsing Network (PSPNet) in Chainer. Training Requirement Python 3.4.4+ Chainer 3.0.0b1+

Multipath RefineNet A MATLAB based framework for semantic image segmentation and general dense prediction tasks on images. This is the source code for

ERFNet (PyTorch version) This code is a toolbox that uses PyTorch for training and evaluating the ERFNet architecture for semantic segmentation. For t

ERFNet This code is a toolbox that uses Torch library for training and evaluating the ERFNet architecture for semantic segmentation. NEW!! New PyTorch

Real-Time Semantic Segmentation in TensorFlow Perform pixel-wise semantic segmentation on high-resolution images in real-time with Image Cascade Netwo

ICNet_tensorflow This repo provides a TensorFlow-based implementation of paper "ICNet for Real-Time Semantic Segmentation on High-Resolution Images,"

Keras-ICNet [paper] Keras implementation of Real-Time Semantic Segmentation on High-Resolution Images. Training in progress! Requisites Python 3.6.3 K

ICNet for Real-Time Semantic Segmentation on High-Resolution Images by Hengshuang Zhao, Xiaojuan Qi, Xiaoyong Shen, Jianping Shi, Jiaya Jia, details a

PixelNet: Representation of the pixels, by the pixels, and for the pixels. We explore design principles for general pixel-level prediction problems, f

Multi-Scale Context Aggregation by Dilated Convolutions Introduction Properties of dilated convolution are discussed in our ICLR 2016 conference paper

Keras implementation of DilatedNet for semantic segmentation A native Keras implementation of semantic segmentation according to Multi-Scale Context A

The One Hundred Layers Tiramisu: Fully Convolutional DenseNets for Semantic Segmentation: Work In Progress, Results can't be replicated yet with the m

FC-DenseNet-Tensorflow This is a re-implementation of the 100 layer tiramisu, technically a fully convolutional DenseNet, in TensorFlow (Tiramisu). Th

Introduction This repo contains the code to train and evaluate FC-DenseNets as described in The One Hundred Layers Tiramisu: Fully Convolutional Dense

TensorFlow-ENet TensorFlow implementation of ENet: A Deep Neural Network Architecture for Real-Time Semantic Segmentation. This model was tested on th

segmentation TensorFlow implementation of ENet (https://arxiv.org/pdf/1606.02147.pdf) based on the official Torch implementation (https://github.com/e

ENet This work has been published in arXiv: ENet: A Deep Neural Network Architecture for Real-Time Semantic Segmentation. Packages: train contains too

ENet in Caffe Execution times and hardware requirements Network 1024x512 1280x720 Parameters Model size (fp32) ENet 20.4 ms 32.9 ms 0.36 M 1.5 MB SegN

FCN-8s implementation in TensorFlow Contents Overview Examples and demo video Dependencies How to use it Download pre-trained VGG-16 Overview This is

semantic-segmentation-tensorflow This is a Tensorflow implementation of semantic segmentation models on MIT ADE20K scene parsing dataset and Cityscape

Using fully convolutional networks for semantic segmentation (Shelhamer et al.) with caffe for the cityscapes dataset How to get started Download the

VGGSegmentation Segmentation vgg16 fcn - cityscapes Priprema skupa skripta prepare_dataset_downsampled.py Iz slika cityscapesa izrezuje haubu automobi

FCN-semantic-segmentation Simple end-to-end semantic segmentation using fully convolutional networks [1]. Takes a pretrained 34-layer ResNet [2], remo

Pytorch for Semantic Segmentation This repo has been deprecated currently and I will not maintain it. Meanwhile, I strongly recommend you can refer to

fcn - Fully Convolutional Networks Chainer implementation of Fully Convolutional Networks. Installation pip install fcn Inference Inference is done as

##A tensorflow implementation of Fully Convolutional Networks For Semantic Segmentation. #USAGE To run the trained classifier on some images: python w

FCN.tensorflow Tensorflow implementation of Fully Convolutional Networks for Semantic Segmentation (FCNs). The implementation is largely based on the

FCN_via_Keras FCN FCN (Fully Convolutional Network) is deep fully convolutional neural network architecture for semantic pixel-wise segmentation. This