Python Multiple-sequence-alignment Resources

split-patch.py This is git add -p on steroids for patches. Given a my.patch you can run ./split-patch.py my.patch You can choose in which bucket to p

BasicVSR_PlusPlus (CVPR 2022) [Paper] [Project Page] [Code] This is the official repository for BasicVSR++. Please feel free to raise issue related to

EMOCA: Emotion Driven Monocular Face Capture and Animation Radek Daněček · Michael J. Black · Timo Bolkart CVPR 2022 This repository is the official i

KARMA DDoS DDoS Script (DDoS Panel) with Multiple Bypass ( Cloudflare UAM,CAPTCHA,BFM,NOSEC / DDoS Guard / Google Shield / V Shield / Amazon / etc.. )

ROCA: Robust CAD Model Alignment and Retrieval from a Single Image (CVPR 2022) Code release of our paper ROCA. Check out our video, paper, and website

MedMCQA MedMCQA : A Large-scale Multi-Subject Multi-Choice Dataset for Medical domain Question Answering A large-scale, Multiple-Choice Question Answe

SOFIMA SOFIMA (Scalable Optical Flow-based Image Montaging and Alignment) is a tool for stitching, aligning and warping large 2d, 3d and 4d microscopy

LG-AI-Challenge-for-Plant-Classification Dacon에서 진행된 농업 환경 변화에 따른 작물 병해 진단 AI 경진대회 에 대한 코드입니다. (colab directory에 코드가 잘 정리 되어있습니다.) Requirements python

rich-msa A simple module to render colorful Multiple Sequence Alignment with rich in the terminal. 🔧 Installing Install the rich-msa package directly

Paper | Blog OFA is a unified multimodal pretrained model that unifies modalities (i.e., cross-modality, vision, language) and tasks (e.g., image gene

Behavior-Sequence-Transformer-Pytorch This is a pytorch implementation for the BST model from Alibaba https://arxiv.org/pdf/1905.06874.pdf This model

A wordlist generator tool, that allows you to supply a set of words, giving you the possibility to craft multiple variations from the given words, creating a unique and ideal wordlist to use regarding a specific target.

Bridging Video-text Retrieval with Multiple Choice Questions, CVPR 2022 (Oral) Paper | Project Page | Pre-trained Model | CLIP-Initialized Pre-trained

TwoStageAlign The official codes of our CVPR2022 paper: A Differentiable Two-stage Alignment Scheme for Burst Image Reconstruction with Large Shift Pa

Description: ProtFeat is designed to extract the protein features by employing POSSUM and iFeature python-based tools. ProtFeat includes a total of 39

EasyMCDM - Quick Installation methods Install with PyPI Once you have created your Python environment (Python 3.6+) you can simply type: pip3 install

mails-in-support-of-UA Using this repository you can send mails to multiple recipients.Was created in support of Ukraine, to turn society`s attention

Meraki Audit v0 API Requests (v0audit.py) (Note: this API key belongs to the Mer

Gclone Discord Utilities Features Clone - Clone a public/private google drive fi

Fibonaaci Series Generating the Fibonacci sequence is a classic recursive proble

yolox-bytetrack-sample YOLOXとByteTrackを用いたMOT(Multiple Object Tracking)のPythonサン

Multiple-requests-poster - A tool to send multiple requests to a particular website written in Python

ht-getter Searches a document for hash tags. Supports multiple natural languages. Works in various contexts. This package uses a non-regex approach an

Official repository of OFA. Paper: Unifying Architectures, Tasks, and Modalities Through a Simple Sequence-to-Sequence Learning Framework

• Socket Chat Room was a little project for socket study. It works with a server handling the incoming connections from the clients. Clients send encoded messages while waiting for others clients messages simultaneously. And the server receive all the messages and delivers to the other clients.

Minimal implementation of Decision Transformer: Reinforcement Learning via Sequence Modeling in PyTorch for mujoco control tasks in OpenAI gym

Astronomia: let the exploration begin The main objective of the game is to destroy multiple waves of asteroids with the help of a blaster mounted on t

Functional-Calculator A simple but fully functional calculator that will take multiple operations. Usage Run the following command through terminal: p

Volumetric TSDF Fusion of RGB-D Images in Python This is a lightweight python script that fuses multiple registered color and depth images into a proj

Image-based Navigation in Real-World Environments via Multiple Mid-level Representations: Fusion Models Benchmark and Efficient Evaluation This reposi

DNA sequence classification by Deep Neural Network: Project Overview worked on the DNA sequence classification problem where the input is the DNA sequ

find_te_ins find_te_ins is designed to find Transposon Element (TE) insertions using long reads (nanopore), by alignment directly. (minimap2) Install

Regression Transformer Codebase to experiment with a hybrid Transformer that combines conditional sequence generation with regression . Development se

Classification using Deep Learning Requirements PyTorch version = 1.9.1+cu111 Python version = 3.8.10 PyTorch-Lightning version = 1.4.9 Huggingface

Multiple-Linear-Regression-master - A python program to implement Multiple Linear Regression using the LinearRegression class from sklearn.linear model library

A clipboard where a user can add and retrieve multiple items to and from (resp) from the clipboard cache.

En- and decrypting text-messages by creating a key with of the fibonacci-sequence. This key helps to create mathematical functions, whose zeros should generates the encrypted message.

Temporal Alignment Prediction for Supervised Representation Learning and Few-Shot Sequence Classification Introduction. This package includes the pyth

jarbou3 Jarbou3 is rat tool with coded in python with C&C which can accept multi

Iterative refinement graph neural network for antibody sequence-structure co-des

FastAPI_and_SocketIO A server hosts a FastAPI application and multiple clients can be connected to it via SocketIO. Executing server.py sets up the se

FluentGenerator Create a random fluent image based on multiple colors. Navigation Example Install Update Usage In Python console FluentGenerator Fluen

System Monitoring Center GTK3 and Python3 based, simple multiple image editor tool. Note: Development of this application is not completed yet. The ap

Discord spam bots with multiple account support and more. PLEASE READ EVERYTHING BEFORE WRITING AN ISSUE!! Server Messages Text Image Dm Messages Text

Program Design Purpose: We want to create an application to visualize single/multiple Xandar Kardian people counting sensors detection result for a indoor area.

Data-Analysis-Web-App Data Analysis Web App can analysis data in multiple formates(csv, txt, xls, xlsx, ods, odt) and gives shows you the analysis in

Diaformer Diaformer: Automatic Diagnosis via Symptoms Sequence Generation (AAAI 2022) Diaformer is an efficient model for automatic diagnosis via symp

Tensorflow Implementation of A Generative Flow for Text-to-Speech via Monotonic Alignment Search

NaturalCC NaturalCC is a sequence modeling toolkit that allows researchers and developers to train custom models for many software engineering tasks,

JASS: Japanese-specific Sequence to Sequence Pre-training for Neural Machine Translation This the repository for this paper. Find extensions of this w

Leaf: Multiple-Choice Question Generation Easy to use and understand multiple-choice question generation algorithm using T5 Transformers. The applicat

ReLSO Improved Fitness Optimization Landscapes for Sequence Design Description Citation How to run Training models Original data source Description In

MIL Model Agnostic Interpretability This repo contains the code for "Model Agnostic Interpretability for Multiple Instance Learning". Overview Executa

Tablicate Tablicate - Python library for easy table creation and output to terminal Features Column-wise justification alignment (left, right, center)

gapmm2: gapped alignment using minimap2 This tool is a wrapper for minimap2 to r

FSRA This repository contains the dataset link and the code for our paper A Transformer-Based Feature Segmentation and Region Alignment Method For UAV

Sequence-Labeling-Early-Exit Code for ACL 2021 paper: Accelerating BERT Inference for Sequence Labeling via Early-Exit Requirement: Please refer to re

pyspark_sam This repo hosts my code for the article "Analyze Big Sequence Alignm

TransMIL: Transformer based Correlated Multiple Instance Learning for Whole Slide Image Classification [NeurIPS 2021] Abstract Multiple instance learn

A boosting-based Multiple Instance Learning (MIL) package that includes MIL-Boost and MCIL-Boost

This is an implementation of Volodymyr Mnih's dissertation methods on his Massachusetts road & building dataset and my original methods that are publi

sequitur sequitur is a library that lets you create and train an autoencoder for sequential data in just two lines of code. It implements three differ

WATTS (Workflow and Template Toolkit for Simulation) provides a set of Python classes that can manage simulation workflows for multiple codes where information is exchanged at a coarse level.

A python script for combining multiple native SU2 format meshes into one mesh file for multi-zone simulations.

Transform application Lifecycle Data and Design and ETL pipeline architecture for ingesting data from multiple sources to redshift This project is composed of two parts: Part1 and Part2

Translators - is a library which aims to bring free, multiple, enjoyable translation to individuals and students in Python

CAMoE + Dual SoftMax Loss (DSL): Improving Video-Text Retrieval by Multi-Stream Corpus Alignment and Dual Softmax Loss This is official implement of "

Simple function to plot multiple barplots in the same figure. Supports padding and custom color.

ParaGen is a PyTorch deep learning framework for parallel sequence generation. Apart from sequence generation, ParaGen also enhances various NLP tasks, including sequence-level classification, extraction and generation.

cross-platform-profile-pic-changer script to change profile pictures across mult

A tool to brute force a gmail account. Use this tool to crack multiple accounts. This tool is developed to crack multiple accounts

DeepMIH: Deep Invertible Network for Multiple Image Hiding (TPAMI 2022) This repo is the official code for DeepMIH: Deep Invertible Network for Multip

Volatile Fast and easy way to rollout on multiple GitLab project file a particular content. Why ? After looking for a tool to simply enforce a develop

Rename-Resize-and-convert-multiple-images A simple code to convert image format and channel as well as resizing and renaming multiple images. This cod

Algorithms Classic algorithms including Fizz Buzz, Bubble Sort, the Fibonacci Sequence, a Sudoku solver, and more. Algorithm Complexity Time and Space

Discord Bulk Image Sending Bot Send bulk images to Discord channel. This is a bot script that will allow you to send multiple images to Discord channe

CFD Python Please cite as: Barba, Lorena A., and Forsyth, Gilbert F. (2018). CFD Python: the 12 steps to Navier-Stokes equations. Journal of Open Sour

mpgitleaks A Python script that wraps the gitleaks tool to enable scanning of multiple repositories in parallel. The motivation behind writing this sc

MetaCall Polyglot REPL Description This repository implements a Polyglot REPL which shares the state of the meta-object protocol between the REPLs. Us

Python implementation of MULTIseq barcode alignment using fuzzy string matching and GMM barcode assignment.

AAF framework Framework generalities This repository contains the code of the AAF framework proposed in this paper. The main idea behind this work is

PAMA This is the Pytorch implementation of Progressive Attentional Manifold Alignment. Requirements python 3.6 pytorch 1.2.0+ PIL, numpy, matplotlib C

Ejemplo Algoritmo Viterbi Ejemplo de un algoritmo Viterbi aplicado a modelo ocul

Concurrent Sync A concurrent sync tool which works similar to rsync. It supports syncing given sources with multiple targets concurrently. Requirement

Forex Data Prediction via Recurrent Neural Network Deep Sequence Modeling Research Paper Our research paper can be viewed here Installation Clone the

MLops tools review focused on execution using multiple cluster types: slurm, kubernetes, dask...

taganomaly Anomaly detection labeling tool, specifically for multiple time series (one time series per category). Taganomaly is a tool for creating la

examify-io is an online examination system that offers automatic grading , exam statistics , proctoring and programming tests , multiple user roles ( Examiner , Supervisor , Student )

BART (Beyond Audio Replay Technology) aids transcribe tasks by taking a source audio file and creating automatic repeated loops, allowing transcribers to listen to fragments multiple times (with possible overlap between segments).

msprime msprime is a population genetics simulator based on tskit. Msprime can simulate random ancestral histories for a sample of individuals (consis

EazeBot Introduction Have you ever traded cryptocurrencies and lost overview of your planned buys/sells? Have you encountered the experience that your

FFsubsync Language-agnostic automatic synchronization of subtitles with video, so that subtitles are aligned to the correct starting point within the

The Diff Match and Patch libraries offer robust algorithms to perform the operations required for synchronizing plain text. Diff: Compare two blocks o

motutils is a Python package for multiple object tracking research with focus on laboratory animals tracking. Features loads: MOTChallenge CSV, sleap

ImageResize Tool Tool made for the FWA Yearbook Team to resize multiple images quickly. Make sure to check this repo for future updates How to Use The

Efficient Single Image Super-Resolution Using Dual Path Connections with Multiple Scale Learning This repository is for EMSRDPN introduced in the foll

pybuster v1.1 pybuster is a tool that is used to brute-force URLs of web servers. Features Directory busting (URI) URL replace patterns (put PYBUSTER

Efficient Single Image Super-Resolution Using Dual Path Connections with Multiple Scale Learning This repository is for EMSRDPN introduced in the foll

Bi-level feature alignment for versatile image translation and manipulation (Under submission of TPAMI) Preparation Clone the Synchronized-BatchNorm-P

Seq2seq Sequence to Sequence Learning with Keras Hi! You have just found Seq2Seq. Seq2Seq is a sequence to sequence learning add-on for the python dee