Python Multiple-sequence-alignment Resources

django-searchable-select A better and faster multiple selection widget with suggestions for Django This project is looking for maintainers! Please ope

django-shapeshifter A common problem in Django is how to have a view, especially a class-based view that can display and process multiple forms at onc

FaPN: Feature-aligned Pyramid Network for Dense Image Prediction [arXiv] [Project Page] @inproceedings{ huang2021fapn, title={{FaPN}: Feature-alig

Free-Course-Hunter-and-Enroller This is a very easy to use tool developed in python that will search for free courses from multiple sites including yo

Automatically download multiple papers by keywords in CVPR

Deobfuscated selfbot sources About. If you whant to add src, please make pull requests. If you whant to deobfuscate src, send mail to its_vichy@proton

Hydralit The Hydralit package is a wrapping and template project to combine multiple independant (or somewhat dependant) Streamlit applications into a

Selene is a Python library and command line interface for training deep neural networks from biological sequence data such as genomes.

Code for the paper: Sequence-to-Sequence Learning with Latent Neural Grammars

Demonstration of OpenVINO techniques - Model-division and a simplest-way to support custom layers Description: Model Optimizer in Intel(r) OpenVINO(tm

rpi-info-monitor A simple, configurable application and set of services to monitor multiple raspberry pi's on a network. It can be used in a terminal

BasicVSR++: Improving Video Super-Resolution with Enhanced Propagation and Alignment

CVFPaperHelper Automatically download multiple papers by keywords in CVPR Install mkdir PapersToRead cd PaperToRead pip install requests tqdm git clon

tox-gh is a tox plugin which helps running tox on GitHub Actions with multiple different Python versions on multiple workers in parallel. This project is inspired by tox-travis.

Script to post multiple status on twitter (i.e. TWITTER STORM) This program can post upto maximum limit of twitter(around 300 tweets) within seconds.

Trajectory Transformer Code release for Reinforcement Learning as One Big Sequence Modeling Problem. Installation All python dependencies are in envir

deep-linear-shapes PyTorch implementation of "Representing Shape Collections with Alignment-Aware Linear Models" paper. If you find this code useful i

MWPToolkit is a PyTorch-based toolkit for Math Word Problem (MWP) solving. It is a comprehensive framework for research purpose that integrates popular MWP benchmark datasets and typical deep learning-based MWP algorithms.

Pytorch-NLU，一个中文文本分类、序列标注工具包，支持中文长文本、短文本的多类、多标签分类任务，支持中文命名实体识别、词性标注、分词等序列标注任务。 Ptorch NLU, a Chinese text classification and sequence annotation toolkit, supports multi class and multi label classification tasks of Chinese long text and short text, and supports sequence annotation tasks such as Chinese named entity recognition, part of speech tagging and word segmentation.

DeepConsensus DeepConsensus uses gap-aware sequence transformers to correct errors in Pacific Biosciences (PacBio) Circular Consensus Sequencing (CCS)

a-shell: A terminal for iOS, with multiple windows

PDF Merger Merge multiple PDF files into one. Usage % python pdf_merger.py -h usage: pdf_merger.py [-h] [-o OUTPUT] [-f [FILES ...]] optional argumen

Template-Based NER Source Code For Template-Based Named Entity Recognition Using BART Training Training train.py Inference inference.py Corpus ATIS (h

Seq2Seq in PyTorch This is a complete suite for training sequence-to-sequence models in PyTorch. It consists of several models and code to both train

Token Shift GPT Implementation of Token Shift GPT - An autoregressive model that relies solely on shifting along the sequence dimension and feedforwar

SADRNet Paper link: SADRNet: Self-Aligned Dual Face Regression Networks for Robust 3D Dense Face Alignment and Reconstruction Requirements python

One-stage object detection is commonly implemented by optimizing two sub-tasks: object classification and localization, using heads with two parallel branches, which might lead to a certain level of spatial misalignment in predictions between the two tasks.

LM-LSTM-CRF Check Our New NER Toolkit 🚀 🚀 🚀 Inference: LightNER: inference w. models pre-trained / trained w. any following tools, efficiently. Tra

ADAT USB Audio Interface FPGA based USB 2.0 High Speed audio interface featuring multiple optical ADAT inputs and outputs Status / current limitations

The tl;dr on a few notable transformer/language model papers + other papers (alignment, memorization, etc).

Seeing Dynamic Scene in the Dark: High-Quality Video Dataset with Mechatronic Alignment This is a pytorch project for the paper Seeing Dynamic Scene i

An Image Captioning codebase This is a codebase for image captioning research. It supports: Self critical training from Self-critical Sequence Trainin

✨A collaborative music playing systems🎶 where multiple guests can join a room ➡🚪 and enjoy the song🎧 being played.

MOTR: End-to-End Multiple-Object Tracking with TRansformer This repository is an official implementation of the paper MOTR: End-to-End Multiple-Object

LightSeq: A High Performance Library for Sequence Processing and Generation

Genalog is an open source, cross-platform python package allowing generation of synthetic document images with custom degradations and text alignment capabilities.

CG-MuAlign A reference implementation for "Collective Multi-type Entity Alignment Between Knowledge Graphs", published in WWW 2020. If you find our pa

Text2Event An implementation for Text2Event: Controllable Sequence-to-Structure Generation for End-to-end Event Extraction Please contact Yaojie Lu (@

ASAP-Net This project implements ASAP-Net of paper ASAP-Net: Attention and Structure Aware Point Cloud Sequence Segmentation (BMVC2020). Overview We i

Sequence Feature Alignment (SFA) By Wen Wang, Yang Cao, Jing Zhang, Fengxiang He, Zheng-jun Zha, Yonggang Wen, and Dacheng Tao This repository is an o

Deep CORAL A PyTorch implementation of 'Deep CORAL: Correlation Alignment for Deep Domain Adaptation. B Sun, K Saenko, ECCV 2016' Deep CORAL can learn

WebClient Service Scanner Python tool to Check running WebClient services on multiple targets based on @tifkin_ idea. This tool uses impacket project.

MASS: Masked Sequence to Sequence Pre-training for Language Generation

A PyTorch Implementation of GGNN This is a PyTorch implementation of the Gated Graph Sequence Neural Networks (GGNN) as described in the paper Gated G

Sequence Modeling Benchmarks and Temporal Convolutional Networks (TCN) This repository contains the experiments done in the work An Empirical Evaluati

PackNet: https://arxiv.org/abs/1711.05769 Pretrained models are available here: https://uofi.box.com/s/zap2p03tnst9dfisad4u0sfupc0y1fxt Datasets in Py

LogDeep is an open source deeplearning-based log analysis toolkit for automated anomaly detection.

H-Transformer-1D Implementation of H-Transformer-1D, Transformer using hierarchical Attention for sequence learning with subquadratic costs. For now,

Table of Contents Table of Contents Local Planner Visualization Project (LPVP) Features Installation/Usage Local Planners Probabilistic Roadmap (PRM)

Online Multiple Object Tracking with Cross-Task Synergy This repository is the implementation of the CVPR 2021 paper "Online Multiple Object Tracking

transducer A Fast Sequence Transducer Implementation with PyTorch Bindings. The corresponding publication is Sequence Transduction with Recurrent Neur

Piggyback: https://arxiv.org/abs/1801.06519 Pretrained masks and backbones are available here: https://uofi.box.com/s/c5kixsvtrghu9yj51yb1oe853ltdfz4q

This is a fork of Fairseq(-py) with implementations of the following models: Pervasive Attention - 2D Convolutional Neural Networks for Sequence-to-Se

TrellisNet for Sequence Modeling This repository contains the experiments done in paper Trellis Networks for Sequence Modeling by Shaojie Bai, J. Zico

Face Alignment in Full Pose Range: A 3D Total Solution By Jianzhu Guo. [Updates] 2020.8.30: The pre-trained model and code of ECCV-20 are made public

Splitter ⠀⠀ A PyTorch implementation of Splitter: Learning Node Representations that Capture Multiple Social Contexts (WWW 2019). Abstract Recent inte

RE2 This is a pytorch implementation of the ACL 2019 paper "Simple and Effective Text Matching with Richer Alignment Features". The original Tensorflo

RetinaFace is a deep learning based cutting-edge facial detector for Python coming with facial landmarks.

CariMe-pytorch The official pytorch implementation of the paper "CariMe: Unpaired Caricature Generation with Multiple Exaggerations" CariMe: Unpaired

linked-bulk-checker bulk checks username availability on multiple sites info people have been selling these so i just made one to release dm my discor

CoderX A proof-of-concept AI system by Graham Neubig (June 30, 2021). About CoderX CoderX is a retrieval-based code generation AI system reminiscent o

TransFill-Reference-Inpainting This is the official repo for TransFill: Reference-guided Image Inpainting by Merging Multiple Color and Spatial Transf

BloodCheck BloodCheck enables Red and Blue Teams to manage multiple Neo4j databases and run Cypher queries against a BloodHound dataset. Installation

Implicit Feature Alignment: Learn to Convert Text Recognizer to Text Spotter This is a pytorch-based implementation for paper Implicit Feature Alignme

Probabilistic Tracklet Scoring and Inpainting for Multiple Object Tracking (CVPR 2021) Pytorch implementation of the ArTIST motion model. In this repo

SeqNet: Learning Descriptors for Sequence-Based Hierarchical Place Recognition [ArXiv+Supplementary] [IEEE Xplore RA-L 2021] [ICRA 2021 YouTube Video]

NoW Evaluation This is the official repository for evaluation on the NoW Benchmark Dataset. The goal of the NoW benchmark is to introduce a standard e

This repository implements a variety of sequence model architectures from scratch in PyTorch. Effort has been put to make the code well structured so that it can serve as learning material. The training loop implements the learner design pattern from fast.ai in pure PyTorch, with access to the loop provided through callbacks. Detailed logging and graphs are also provided with python logging and wandb. Additional implementations will be added.

Markup is an online annotation tool that can be used to transform unstructured documents into structured formats for NLP and ML tasks, such as named-entity recognition. Markup learns as you annotate in order to predict and suggest complex annotations. Markup also provides integrated access to existing and custom ontologies, enabling the prediction and suggestion of ontology mappings based on the text you're annotating.

AWS-CloudFront Problem: Deploy multiple CloudFront for account with multiple domains. Functionality: Running this script in loop and deploy CloudFront

TRICE: a task-agnostic transferring framework for multi-source sequence generation This is the source code of our work Transfer Learning for Sequence

leakscoop Perform queries across multiple MongoDB databases and collections, where the field names and the field content structure in each database ma

Ingest and query genomic intervals from multiple BED files.

ASMA-GAN Anisotropic Stroke Control for Multiple Artists Style Transfer Proceedings of the 28th ACM International Conference on Multimedia The officia

InsightFace: 2D and 3D Face Analysis Project on MXNet and PyTorch

wp-automation Info: this is a simple automation software that sends WhatsApp message to single or multiple users. Key feature: -Sends message to multi

r2env This repository contains the tool available via pip to install and manage multiple versions of radare2 and its plugins. r2-tools doesn't conflic

Decision Transformer Lili Chen*, Kevin Lu*, Aravind Rajeswaran, Kimin Lee, Aditya Grover, Michael Laskin, Pieter Abbeel, Aravind Srinivas†, and Igor M

You Only 👀 One Sequence TL;DR: We study the transferability of the vanilla ViT pre-trained on mid-sized ImageNet-1k to the more challenging COCO obje

U2Fusion Code of U2Fusion: a unified unsupervised image fusion network for multiple image fusion tasks, including multi-modal (VIS-IR, medical), multi

Lexicon Enhanced Chinese Sequence Labeling Using BERT Adapter Code and checkpoints for the ACL2021 paper "Lexicon Enhanced Chinese Sequence Labelling

This repository includes the codes, the experiment configurations and the scripts to prepare/download data for the Simultaneous Machine Translation wi

Trivial Augment This is the official implementation of TrivialAugment (https://arxiv.org/abs/2103.10158), as was used for the paper. TrivialAugment is

Mask-Align: Self-Supervised Neural Word Alignment This is the implementation of our work Mask-Align: Self-Supervised Neural Word Alignment. @inproceed

Lingtrain Aligner ML powered library for the accurate texts alignment in different languages. Purpose Main purpose of this alignment tool is to build

CAUSE: Causality from AttribUtions on Sequence of Events

RMA-Net This repo is the implementation of the paper: Recurrent Multi-view Alignment Network for Unsupervised Surface Registration (CVPR 2021). Paper

Time series Timeseries Deep Learning Pytorch fastai - State-of-the-art Deep Learning with Time Series and Sequences in Pytorch / fastai

YOLOR implementation of paper - You Only Learn One Representation: Unified Network for Multiple Tasks To reproduce the results in the paper, please us

SapBERT: Self-alignment pretraining for BERT This repo holds code for the SapBERT model presented in our NAACL 2021 paper: Self-Alignment Pretraining

MevonAI - Speech Emotion Recognition

nmtpytorch allows training of various end-to-end neural architectures including but not limited to neural machine translation, image captioning and au

Fairseq(-py) is a sequence modeling toolkit that allows researchers and developers to train custom models for translation, summarization, language mod

VoiceLoop PyTorch implementation of the method described in the paper VoiceLoop: Voice Fitting and Synthesis via a Phonological Loop. VoiceLoop is a n

django-shapeshifter A common problem in Django is how to have a view, especially a class-based view that can display and process multiple forms at onc

Intro This is the repository for CVPR2021 Dynamic Metric Learning: Towards a Scalable Metric Space to Accommodate Multiple Semantic Scales Vehicle Sam

Quasi-Dense Tracking This is the offical implementation of paper Quasi-Dense Similarity Learning for Multiple Object Tracking. We present a trailer th

Organize Django settings into multiple files and directories. Easily override and modify settings. Use wildcards in settings file paths and mark setti

LightSeq is a high performance inference library for sequence processing and generation implemented in CUDA. It enables highly efficient computation of modern NLP models such as BERT, GPT2, Transformer, etc. It is therefore best useful for Machine Translation, Text Generation, Dialog， Language Modelling, and other related tasks using these models.

SeqIO: Task-based datasets, preprocessing, and evaluation for sequence models. SeqIO is a library for processing sequential data to be fed into downst