Python Data-Analytics-on-Genomes-and-Genetics Resources

imbalanced-learn imbalanced-learn is a python package offering a number of re-sampling techniques commonly used in datasets showing strong between-cla

Antialiased CNNs [Project Page] [Paper] [Talk] Making Convolutional Networks Shift-Invariant Again Richard Zhang. In ICML, 2019. Quick & easy start Ru

AdaBound An optimizer that trains as fast as Adam and as good as SGD, for developing state-of-the-art deep learning models on a wide variety of popula

Here is Poutyne. Poutyne is a simplified framework for PyTorch and handles much of the boilerplating code needed to train neural networks. Use Poutyne

micrograd A tiny Autograd engine (with a bite! :)). Implements backpropagation (reverse-mode autodiff) over a dynamically built DAG and a small neural

Tez: a simple pytorch trainer NOTE: Currently, we are not accepting any pull requests! All PRs will be closed. If you want a feature or something does

PyTorch Implementation of Differentiable SDE Solvers This library provides stochastic differential equation (SDE) solvers with GPU support and efficie

Torch-Struct: Structured Prediction Library A library of tested, GPU implementations of core structured prediction algorithms for deep learning applic

Pytorch-toolbelt A pytorch-toolbelt is a Python library with a set of bells and whistles for PyTorch for fast R&D prototyping and Kaggle farming: What

README TabNet : Attentive Interpretable Tabular Learning This is a pyTorch implementation of Tabnet (Arik, S. O., & Pfister, T. (2019). TabNet: Attent

(Generic) EfficientNets for PyTorch A 'generic' implementation of EfficientNet, MixNet, MobileNetV3, etc. that covers most of the compute/parameter ef

Torchmeta A collection of extensions and data-loaders for few-shot learning & meta-learning in PyTorch. Torchmeta contains popular meta-learning bench

News March 3: v0.9.97 has various bug fixes and improvements: Bug fixes for NTXentLoss Efficiency improvement for AccuracyCalculator, by using torch i

PyTorch Implementation of Differentiable ODE Solvers This library provides ordinary differential equation (ODE) solvers implemented in PyTorch. Backpr

ipyexperiments jupyter/ipython experiment containers and utils for profiling and reclaiming GPU and general RAM, and detecting memory leaks. About Thi

SpeedTorch Faster pinned CPU tensor - GPU Pytorch variabe transfer and GPU tensor - GPU Pytorch variable transfer, in certain cases. Update 9-29-1

cuGraph - GPU Graph Analytics The RAPIDS cuGraph library is a collection of GPU accelerated graph algorithms that process data found in GPU DataFrames

Vulkan Kompute The general purpose GPU compute framework for cross vendor graphics cards (AMD, Qualcomm, NVIDIA & friends). Blazing fast, mobile-enabl

A lightweight, GPU accelerated, SQL engine built on the RAPIDS.ai ecosystem. Get Started on app.blazingsql.com Getting Started | Documentation | Examp

NVIDIA DALI The NVIDIA Data Loading Library (DALI) is a library for data loading and pre-processing to accelerate deep learning applications. It provi

Introduction This repository holds NVIDIA-maintained utilities to streamline mixed precision and distributed training in Pytorch. Some of the code her

gpustat Just less than nvidia-smi? NOTE: This works with NVIDIA Graphics Devices only, no AMD support as of now. Contributions are welcome! Self-Promo

Somoclu Somoclu is a massively parallel implementation of self-organizing maps. It exploits multicore CPUs, it is able to rely on MPI for distributing

sk-dist: Distributed scikit-learn meta-estimators in PySpark What is it? sk-dist is a Python package for machine learning built on top of scikit-learn

BytePS BytePS is a high performance and general distributed training framework. It supports TensorFlow, Keras, PyTorch, and MXNet, and can run on eith

Description FairScale is a PyTorch extension library for high performance and large scale training on one or multiple machines/nodes. This library ext

A unified Data Analytics and AI platform for distributed TensorFlow, Keras and PyTorch on Apache Spark/Flink & Ray What is Analytics Zoo? Analytics Zo

DeepSpeed is a deep learning optimization library that makes distributed training easy, efficient, and effective. 10x Larger Models 10x Faster Trainin

Petastorm Contents Petastorm Installation Generating a dataset Plain Python API Tensorflow API Pytorch API Spark Dataset Converter API Analyzing petas

BigDL: Distributed Deep Learning on Apache Spark What is BigDL? BigDL is a distributed deep learning library for Apache Spark; with BigDL, users can w

Horovod Horovod is a distributed deep learning training framework for TensorFlow, Keras, PyTorch, and Apache MXNet. The goal of Horovod is to make dis

Ray provides a simple, universal API for building distributed applications. Ray is packaged with the following libraries for accelerating machine lear

Auto_TS: Auto_TimeSeries Automatically build multiple Time Series models using a Single Line of Code. Now updated with Dask. Auto_timeseries is a comp

matrixprofile-ts matrixprofile-ts is a Python 2 and 3 library for evaluating time series data using the Matrix Profile algorithms developed by the Keo

seglearn Seglearn is a python package for machine learning time series or sequences. It provides an integrated pipeline for segmentation, feature extr

STUMPY STUMPY is a powerful and scalable library that efficiently computes something called the matrix profile, which can be used for a variety of tim

Time Series Made Easy in Python darts is a python library for easy manipulation and forecasting of time series. It contains a variety of models, from

Streamz Streamz helps you build pipelines to manage continuous streams of data. It is simple to use in simple cases, but also supports complex pipelin

tslearn The machine learning toolkit for time series analysis in Python Section Description Installation Installing the dependencies and tslearn Getti

Welcome to sktime A unified framework for machine learning with time series We provide specialized time series algorithms and scikit-learn compatible

tsfresh This repository contains the TSFRESH python package. The abbreviation stands for "Time Series Feature extraction based on scalable hypothesis

Surpriver - Find High Moving Stocks before they Move Find high moving stocks before they move using anomaly detection and machine learning. Surpriver

Qlib is an AI-oriented quantitative investment platform, which aims to realize the potential, empower the research, and create the value of AI technol

TensorTrade: Trade Efficiently with Reinforcement Learning TensorTrade is still in Beta, meaning it should be used very cautiously if used in producti

empyrical Common financial risk metrics. Table of Contents Installation Usage Support Contributing Testing Installation pip install empyrical Usage S

pyfolio pyfolio is a Python library for performance and risk analysis of financial portfolios developed by Quantopian Inc. It works well with the Zipl

Technical Analysis Library in Python It is a Technical Analysis library useful to do feature engineering from financial time series datasets (Open, Cl

alpha_vantage Python module to get stock data/cryptocurrencies from the Alpha Vantage API Alpha Vantage delivers a free API for real time financial da

Yahoo! Finance market data downloader Ever since Yahoo! finance decommissioned their historical data API, many programs that relied on it to stop work

geoplotlib is a python toolbox for visualizing geographical data and making maps data = read_csv('data/bus.csv') geoplotlib.dot(data) geoplotlib.show(

Location Data Visualization library for Jupyter Notebooks Library documentation at https://mapbox-mapboxgl-jupyter.readthedocs-hosted.com/en/latest/.

sentinelsat Sentinelsat makes searching, downloading and retrieving the metadata of Sentinel satellite images from the Copernicus Open Access Hub easy

Satpy The Satpy package is a python library for reading and manipulating meteorological remote sensing data and writing it to various image and data f

EarthPy EarthPy makes it easier to plot and manipulate spatial data in Python. Why EarthPy? Python is a generic programming language designed to suppo

ArcGIS API for Python ArcGIS API for Python is a Python library for working with maps and geospatial data, powered by web GIS. It provides simple and

geojson This Python library contains: Functions for encoding and decoding GeoJSON formatted data Classes for all GeoJSON Objects An implementation of

Fiona Fiona reads and writes geographic data files and thereby helps Python programmers integrate geographic information systems with other computer s

Rasterio Rasterio reads and writes geospatial raster data. Geographic information systems use GeoTIFF and other formats to organize and store gridded,

pyproj Python interface to PROJ (cartographic projections and coordinate transformations library). Documentation Stable: http://pyproj4.github.io/pypr

GeoPandas Python tools for geographic data Introduction GeoPandas is a project to add support for geographic data to pandas objects. It currently impl

Shapely Manipulation and analysis of geometric objects in the Cartesian plane. Shapely is a BSD-licensed Python package for manipulation and analysis

folium Python Data, Leaflet.js Maps folium builds on the data wrangling strengths of the Python ecosystem and the mapping strengths of the Leaflet.js

deck.gl | Website WebGL2-powered, highly performant large-scale data visualization deck.gl is designed to simplify high-performance, WebGL-based visua

Apache Flink Apache Flink is an open source stream processing framework with powerful stream- and batch-processing capabilities. Learn more about Flin

A Differentiable Recurrent Surface for Asynchronous Event-Based Data Code for the ECCV2020 paper "A Differentiable Recurrent Surface for Asynchronous

Maths from examples - Learning advanced mathematical computations from examples This is the source code and data sets relevant to the paper Learning a

A Benchmark for Rough Sketch Cleanup This is the code repository associated with the paper A Benchmark for Rough Sketch Cleanup by Chuan Yan, David Va

Open-L2O This repository establishes the first comprehensive benchmark efforts of existing learning to optimize (L2O) approaches on a number of proble

CDIoU-CDIoUloss CDIoU and CDIoU loss is like a convenient plug-in that can be used in multiple models. CDIoU and CDIoU loss have different excellent p

RIDE: ROS IDE RIDE automatically creates the package and boilerplate OOP Python code for nodes as per your needs (RIDE is not an IDE, but even ROS isn

Twitter Last Seen Activity Let your friends know when you are online and offline Laser-light eyes when online Last seen is mentioned in user bio Also

TGBIOFY - Telegram & Spotify integration Changes the Telegram bio, profile picture, first and last name to the song that the user is currently listeni

SERank An efficient and effective learning to rank algorithm by mining information across ranking candidates. This repository contains the tensorflow

Understanding and Improving Encoder Layer Fusion in Sequence-to-Sequence Learning (ICLR 2021) Citation Please cite as: @inproceedings{liu2020understan

DESCRIPTION This bot is designed to buy bitcoin every time Elon musk tweets about bitcoin with the following parameters: The bot will open a buy pos

gitrecon OSINT tool to get information from a Github or Gitlab profile and find user's email addresses leaked on commits. 📚 How does this work? GitHu

Copylot Your copilot to studies and work (Pomodoro-timer, Translate and Notes app) Copylot are three applications in one: Pomodoro Translate Notes Cop

TiktokAutoUploader - Open to code contributions Automatically Edits Videos and Uploads to Tiktok with 1 line of code. Setup pip install -r requirement

mune · Mune is an open source python web application built to analyze stocks, named after Homma Munehisa. Currently, the forecasting component is powe

Broken Phone Recovery a guide how to backup data from your locked android phone if you broke your screen (and more) you can skip some steps depending

Deep GNN, Shallow Sampling Hanqing Zeng, Muhan Zhang, Yinglong Xia, Ajitesh Srivastava, Andrey Malevich, Rajgopal Kannan, Viktor Prasanna, Long Jin, R

Discord Nitro Generator and Checker A discord nitro generator and checker for all your nitro needs Explore the docs » Report Bug · Request Feature · J

Telegram Voice Chat UserBot A Telegram UserBot to Play Audio in Voice Chats. This is also the source code of the userbot which is being used for playi

ID Verification by LibraX.ai This is the first free Identity verification in the market. LibraX.ai is an identity verification platform for developers

Simple Spotify Overlay This is a simple yet powerful Spotify Overlay. About I have been looking for something like this ever since I got Spotify. I th

Dual Encoding for Video Retrieval by Text Source code of our TPAMI'21 paper Dual Encoding for Video Retrieval by Text and CVPR'19 paper Dual Encoding

Passive TCP/IP Fingerprinting This is a passive TCP/IP fingerprinting tool. Run this on your server and find out what operating systems your clients a

Overview Nidaba is the central controller for the entire OGL OCR pipeline. It oversees and automates the process of converting raw images into citable

Open Semantic Search https://opensemanticsearch.org Integrated search server, ETL framework for document processing (crawling, text extraction, text a

ScanTailor Advanced The ScanTailor version that merges the features of the ScanTailor Featured and ScanTailor Enhanced versions, brings new ones and f

doc2text doc2text extracts higher quality text by fixing common scan errors Developing text corpora can be a massive pain in the butt. Much of the tex

awesome-SynthText A curated list of awesome synthetic data for text location and recognition and OCR datasets. Text location SynthText SynthText_Chine

TextRecognitionDataGenerator A synthetic data generator for text recognition What is it for? Generating text image samples to train an OCR software. N

Total-Text-Dataset (Official site) Updated on April 29, 2020 (Detection leaderboard is updated - highlighted E2E methods. Thank you shine-lcy.) Update

hocr-tools About About the code Installation System-wide with pip System-wide from source virtualenv Available Programs hocr-check -- check the hOCR f

ocr-fileformat Validate and transform between OCR file formats (hOCR, ALTO, PAGE, FineReader) Installation Docker System-wide Usage CLI GUI API Transf

PAGE-XML PAGE XML format collection for document image page content and more For an introduction, please see the following publication: http://www.pri

SceneTextPapers Tracking the latest progress in Scene Text Detection and Recognition: must-read papers well organized Information about this repositor

OCR Resources This repository contains a collection of resources (including the papers and datasets) of OCR (Optical Character Recognition). Contents

Awesome Scene Text A curated list of papers and resources for scene text detection and recognition The year when a paper was first published, includin