Python Data-Analytics-on-Genomes-and-Genetics Resources

Gunicorn Gunicorn 'Green Unicorn' is a Python WSGI HTTP Server for UNIX. It's a pre-fork worker model ported from Ruby's Unicorn project. The Gunicorn

Glances - An eye on your system Summary Glances is a cross-platform monitoring tool which aims to present a large amount of monitoring information thr

Ganeti 3.0 =========== For installation instructions, read the INSTALL and the doc/install.rst files. For a brief introduction, read the ganeti(7) m

Ajenti is a Linux & BSD modular server admin panel. Ajenti 2 provides a new interface and a better architecture, developed with Python3 and AngularJS.

Apache Airflow Apache Airflow (or simply Airflow) is a platform to programmatically author, schedule, and monitor workflows. When workflows are define

sqlmap sqlmap is an open source penetration testing tool that automates the process of detecting and exploiting SQL injection flaws and taking over of

S3QL S3QL is a file system that stores all its data online using storage services like Google Storage, Amazon S3, or OpenStack. S3QL effectively provi

A REPL for Postgres This is a postgres client that does auto-completion and syntax highlighting. Home Page: http://pgcli.com MySQL Equivalent: http://

mycli A command line client for MySQL that can do auto-completion and syntax highlighting. HomePage: http://mycli.net Documentation: http://mycli.net/

Kinto Kinto is a minimalist JSON storage service with synchronisation and sharing abilities. Online documentation Tutorial Issue tracker Contributing

Datasette An open source multi-tool for exploring and publishing data Datasette is a tool for exploring and publishing data. It helps people take data

Barman, Backup and Recovery Manager for PostgreSQL Barman (Backup and Recovery Manager) is an open-source administration tool for disaster recovery of

Review Board Review Board is an open source, web-based code and document review tool built to help companies, open source projects, and other organiza

ViewVC - Version Control Browser Interface ViewVC is a browser interface for CVS and Subversion version control repositories. It generates templatized

About Trac Trac is a minimalistic web-based software project management and bug/issue tracking system. It provides an interface to the Git and Subvers

Patchwork Patchwork is a patch tracking system for community-based projects. It is intended to make the patch management process easier for both the p

Website • Docs • Blog • Twitter • Chat (Community & Support) • Tutorial • Mailing List Data Version Control or DVC is an open-source tool for data sci

Spack Spack is a multi-platform package manager that builds and installs multiple versions and configurations of software. It works on Linux, macOS, a

Dandified YUM Dandified YUM (DNF) is the next upcoming major version of YUM. It does package management using RPM, libsolv and hawkey libraries. For m

Grow Grow is a declarative tool for rapidly building, launching, and maintaining high-quality static HTML. Easy installation Jinja template engine Con

News Cactus 3 is out! We're happy to announce Cactus 3. It brings a set of great new features like asset fingerprinting, an asset pipeline, pretty url

Trafalgar Python library to make development of portfolio analysis faster and easier Installation 🔥 For the moment, Trafalgar is still in beta develo

Find Jobs on LinkedIn 📔 This program finds jobs by scraping on LinkedIn 👨‍💻 Relies on User Input. Accepts: Country, City, State 📑 Data about jobs

SSL_SLAM2 Lightweight 3-D Localization and Mapping for Solid-State LiDAR (Intel Realsense L515 as an example) This repo is an extension work of SSL_SL

CoTr: Efficient 3D Medical Image Segmentation by bridging CNN and Transformer This is the official pytorch implementation of the CoTr: Paper: CoTr: Ef

Send any valid video file and the bot shows you available streams in it that can be extracted!!

Evaluation, Training, Demo, and Inference of DeFMO DeFMO: Deblurring and Shape Recovery of Fast Moving Objects (CVPR 2021) Denys Rozumnyi, Martin R. O

Anycost GAN video | paper | website Anycost GANs for Interactive Image Synthesis and Editing Ji Lin, Richard Zhang, Frieder Ganz, Song Han, Jun-Yan Zh

sentello Sentello is a python script that simulates the anti-evasion and anti-analysis techniques used by malware. For techniques that are difficult t

Introduction Reconstant lets you share constant and enum definitions between programming languages. Constants are defined in a yaml file and converted

Lazynite Lazynite is a PC remote controller for YouTube and Twitch on Telegram. Features Volume control; Browser fullscreen / video fullscreen; PC shu

Rebib TLDR: This script retrieves information from DBLP to update your BibTex files. python rebib.py --bibfile xxx.bib It first parses the bib entries

Consistency Regularization for Adversarial Robustness Official PyTorch implementation of Consistency Regularization for Adversarial Robustness by Jiho

SyscallExtractorAnalyzer This script will pull and analyze syscalls in given application(s) allowing for easier security research purposes Goals Teach

Data Structures and Algorithms Python INDEX 1. Resources - Books Data Structures - Reema Thareja competitiveCoding Big-O Cheat Sheet DAA Syllabus Inte

BBB Streamer NG? Makes a conference like this... ...streamable like this! I also recorded a small video showing the basic features: https://www.youtub

zpy: Synthetic data in Blender. Website • Install • Docs • Examples • CLI • Contribute • Licence Abstract Collecting, labeling, and cleaning data for

Market Sentiment About This repository can mainly be used for two things. a. Tracking the live sentiment of stocks from Reddit and Twitter b. Tracking

Object Pose Estimation Demo This tutorial will go through the steps necessary to perform pose estimation with a UR3 robotic arm in Unity. You’ll gain

Algo-ScriptML Python implementations of some of the fundamental Machine Learning models and algorithms from scratch. The goal of this project is not t

ODMD Dataset ODMD is the first dataset for learning Object Depth via Motion and Detection. ODMD training data are configurable and extensible, with ea

Konfsave Konfsave is a config manager. That is, it allows you to save, back up, and easily switch between different (per-user) system configurations.

Create Django App 💛 We're a Django project starter on steroids! One-line command to create a Django app with all the dependencies auto-installed AND

ClassSR (CVPR2021) ClassSR: A General Framework to Accelerate Super-Resolution Networks by Data Characteristic Paper Authors: Xiangtao Kong, Hengyuan

Auto Filter Bot ㅤㅤㅤㅤㅤㅤㅤ ㅤㅤㅤㅤㅤㅤㅤ You can call this as an Auto Filter Bot if you like :D Bot simply search for the files from provided channel according

TradingView Machine Learning TradeView is a free and open source Trading View bot written in Python. It is designed to support all major exchanges. It

Easy Few-Shot Learning Ready-to-use code and tutorial notebooks to boost your way into few-shot image classification. This repository is made for you

Rubicon Purpose Rubicon is a data science tool that captures and stores model training and execution information, like parameters and outcomes, in a r

Data Augmentation using Pre-trained Transformer Models Code associated with the Data Augmentation using Pre-trained Transformer Models paper Code cont

MMdnn MMdnn is a comprehensive and cross-framework tool to convert, visualize and diagnose deep learning (DL) models. The "MM" stands for model manage

Jubatus The Jubatus library is an online machine learning framework which runs in distributed environment. See http://jubat.us/ for details. Quick Sta

Horovod Horovod is a distributed deep learning training framework for TensorFlow, Keras, PyTorch, and Apache MXNet. The goal of Horovod is to make dis

weightedcalcs weightedcalcs is a pandas-based Python library for calculating weighted means, medians, standard deviations, and more. Features Plays we

Pandas Profiling Documentation | Slack | Stack Overflow Generates profile reports from a pandas DataFrame. The pandas df.describe() function is great

pandas_summary An extension to pandas dataframes describe function. The module contains DataFrameSummary object that extend describe() with: propertie

Albumentations Albumentations is a Python library for image augmentation. Image augmentation is used in deep learning and computer vision tasks to inc

madmom Madmom is an audio signal processing library written in Python with a strong focus on music information retrieval (MIR) tasks. The library is i

muda A library for Musical Data Augmentation. muda package implements annotation-aware musical data augmentation, as described in the muda paper. The

Welcome to MARSYAS. MARSYAS is a software framework for rapid prototyping of audio applications, with flexibility and extensibility as primary concer

Essentia Essentia is an open-source C++ library for audio analysis and audio-based music information retrieval released under the Affero GPL license.

aubio aubio is a library to label music and sounds. It listens to audio signals and attempts to detect events. For instance, when a drum is hit, at wh

NLopt is a library for nonlinear local and global optimization, for functions with and without gradient information. It is designed as a simple, unifi

Hyperparameter Optimization for Keras Talos • Key Features • Examples • Install • Support • Docs • Issues • License • Download Talos radically changes

Platypus What is Platypus? Platypus is a framework for evolutionary computing in Python with a focus on multiobjective evolutionary algorithms (MOEAs)

Karoo GP Karoo GP is an evolutionary algorithm, a genetic programming application suite written in Python which supports both symbolic regression and

GPyTorch GPyTorch is a Gaussian process library implemented using PyTorch. GPyTorch is designed for creating scalable, flexible, and modular Gaussian

emcee The Python ensemble sampling toolkit for affine-invariant MCMC emcee is a stable, well tested Python implementation of the affine-invariant ense

PtStat Probabilistic Programming and Statistical Inference in PyTorch. Introduction This project is being developed during my time at Cogent Labs. The

Aboleth A bare-bones TensorFlow framework for Bayesian deep learning and Gaussian process approximation [1] with stochastic gradient variational Bayes

A supervised domain-agnostic framework that allows for probabilistic modelling, namely the prediction of probability distributions for individual data

Getting Started | Documentation | Community | Contributing Pyro is a flexible, scalable deep probabilistic programming library built on PyTorch. Notab

TF-Agents: A reliable, scalable and easy to use TensorFlow library for Contextual Bandits and Reinforcement Learning. TF-Agents makes implementing, de

Stable Baselines Stable Baselines is a set of improved implementations of reinforcement learning algorithms based on OpenAI Baselines. You can read a

Master status: Development status: Package information: scikit-rebate This package includes a scikit-learn-compatible Python implementation of ReBATE,

BoostARoota A Fast XGBoost Feature Selection Algorithm (plus other sklearn tree-based classifiers) Why Create Another Algorithm? Automated processes l

tsfresh This repository contains the TSFRESH python package. The abbreviation stands for "Time Series Feature extraction based on scalable hypothesis

Feature Forge This library provides a set of tools that can be useful in many machine learning applications (classification, clustering, regression, e

"One of the holy grails of machine learning is to automate more and more of the feature engineering process." ― Pedro Domingos, A Few Useful Things to

Prodmodel is a build system for data science pipelines. Users, testers, contributors are welcome! Motivation · Concepts · Installation · Usage · Contr

meza: A Python toolkit for processing tabular data Index Introduction | Requirements | Motivation | Hello World | Usage | Interoperability | Installat

pyjanitor pyjanitor is a Python implementation of the R package janitor, and provides a clean API for cleaning data. Why janitor? Originally a port of

BatchFlow BatchFlow helps you conveniently work with random or sequential batches of your data and define data processing and machine learning workflo

pandas-ply: functional data manipulation for pandas pandas-ply is a thin layer which makes it easier to manipulate data with pandas. In particular, it

pdpipe ˨ Easy pipelines for pandas DataFrames (learn how!). Website: https://pdpipe.github.io/pdpipe/ Documentation: https://pdpipe.github.io/pdpipe/d

What is Vaex? Vaex is a high performance Python library for lazy Out-of-Core DataFrames (similar to Pandas), to visualize and explore big tabular data

pandas API on Apache Spark Explore Koalas docs » Live notebook · Issues · Mailing list Help Thirsty Koalas Devastated by Recent Fires The Koalas proje

datatable This is a Python package for manipulating 2-dimensional tabular data structures (aka data frames). It is close in spirit to pandas or SFrame

Arctic TimeSeries and Tick store Arctic is a high performance datastore for numeric data. It supports Pandas, numpy arrays and pickled objects out-of-

pysparkling Pysparkling provides a faster, more responsive way to develop programs for PySpark. It enables code intended for Spark applications to exe

XPandas (extended Pandas) implements 1D and 2D data containers for storing type-heterogeneous tabular data of any type, and encapsulates feature extra

pandas-gbq pandas-gbq is a package providing an interface to the Google BigQuery API from pandas Installation Install latest release version via conda

Blaze translates a subset of modified NumPy and Pandas-like syntax to databases and other computing systems. Blaze allows Python users a familiar inte

Pandas Profiling Documentation | Slack | Stack Overflow Generates profile reports from a pandas DataFrame. The pandas df.describe() function is great

Logging MXNet Data for Visualization in TensorBoard Overview MXBoard provides a set of APIs for logging MXNet data for visualization in TensorBoard. T

tensorboardX Write TensorBoard events with simple function call. The current release (v2.1) is tested on anaconda3, with PyTorch 1.5.1 / torchvision 0

Netron is a viewer for neural network, deep learning and machine learning models. Netron supports ONNX (.onnx, .pb, .pbtxt), Keras (.h5, .keras), Tens

Lucid Lucid is a collection of infrastructure and tools for research in neural network interpretability. We're not currently supporting tensorflow 2!

AI Explainability 360 (v0.2.1) The AI Explainability 360 toolkit is an open-source library that supports interpretability and explainability of datase

TreeInterpreter Package for interpreting scikit-learn's decision tree and random forest predictions. Allows decomposing each prediction into bias and

ELI5 ELI5 is a Python package which helps to debug machine learning classifiers and explain their predictions. It provides support for the following m