Python Graph-representation Resources

deeper_insights_into_GCNs Deeper insights into graph convolutional networks for semi-supervised learning References data and utils.py come from Implem

Reference Code for AAAI-20 paper "Multi-Stage Self-Supervised Learning for Graph Convolutional Networks on Graphs with Few Labels" Please refer to htt

Self-supervised edge features for improved Graph Neural Network training Data availability: Here is a link to the raw data for the organoids dataset.

DrRepair: Learning to Repair Programs from Error Messages This repo provides the source code & data of our paper: Graph-based, Self-Supervised Program

Autoregressive Predictive Coding This repository contains the official implementation (in PyTorch) of Autoregressive Predictive Coding (APC) proposed

Implementation for the papers: Self-Supervised Hyperboloid Representations from Logical Queries over Knowledge Graphs, Nurendra Choudhary, Nikhil Rao,

Self-labelling via simultaneous clustering and representation learning 🆗 🆗 🎉 NEW models (20th August 2020): Added standard SeLa pretrained torchvis

MoCo: Momentum Contrast for Unsupervised Visual Representation Learning This is a PyTorch implementation of the MoCo paper: @Article{he2019moco, aut

Unsupervised Learning by Invariance Propagation This repository is the official implementation of Unsupervised Learning by Invariance Propagation. Pre

Learning to Classify Images without Labels This repo contains the Pytorch implementation of our paper: SCAN: Learning to Classify Images without Label

Official PyTorch implementation of the paper: "Self-Supervised Relational Reasoning for Representation Learning" (2020), Patacchiola, M., and Storkey,

Self-supervised Video Representation Learning Using Inter-intra Contrastive Framework Official code for paper, Self-supervised Video Representation Le

PRP Introduction This is the implementation of our paper "Video Playback Rate Perception for Self-supervised Spatio-Temporal Representation Learning".

Video_Pace This repository contains the code for the following paper: Jiangliu Wang, Jianbo Jiao and Yunhui Liu, "Self-Supervised Video Representation

Video Representation Learning by Recognizing Temporal Transformations [Project Page] Simon Jenni, Givi Meishvili, and Paolo Favaro. In ECCV, 2020. Thi

CoCLR: Self-supervised Co-Training for Video Representation Learning This repository contains the implementation of: InfoNCE (MoCo on videos) UberNCE

Video Representation Learning with Visual Tempo Consistency [Paper] [Project Page] News Full codebae is coming soon Pretained Models For now, we provi

RSPNet Official Pytorch implementation for AAAI2021 paper "RSPNet: Relative Speed Perception for Unsupervised Video Representation Learning" [Suppleme

Unsupervised State Representation Learning in Atari Ankesh Anand*, Evan Racah*, Sherjil Ozair*, Yoshua Bengio, Marc-Alexandre Côté, R Devon Hjelm This

Mandelbrot Set Generator A small script written in Python3 that generates a visual representation of the Mandelbrot set. Abstract The colors in the ou

SAG-DTA The code is the implementation for the paper 'SAG-DTA: Prediction of Drug–Target Affinity Using Self-Attention Graph Network'. Requirements py

Cross Domain Facial Expression Recognition Benchmark Implementation of papers: Cross-Domain Facial Expression Recognition: A Unified Evaluation Benchm

🚨 Update 🚨 : As of 2021/10/17, the jiant project is no longer being actively maintained. This means there will be no plans to add new models, tasks,

AutoSF The code for our paper "AutoSF: Searching Scoring Functions for Knowledge Graph Embedding" and this paper has been accepted by ICDE2020. News:

UMLS-Graph Build a medical knowledge graph based on Unified Language Medical System (UMLS) Requisite Install MySQL Server 5.6 and import UMLS data int

MS Graph API authentication example with Fast API What it is & does This is a simple python service/webapp, using FastAPI with server side rendering,

LynxKite is a complete graph data science platform for very large graphs and other datasets. It seamlessly combines the benefits of a friendly graphical interface and a powerful Python API.

pysal/spaghetti SPAtial GrapHs: nETworks, Topology, & Inference Spaghetti is an open-source Python library for the analysis of network-based spatial d

tfgraphviz tfgraphviz is a module to visualize a TensorFlow's data flow graph like TensorBoard using Graphviz. tfgraphviz enables to provide a visuali

Flask-API-Utils Flask-API-Utils helps you to create APIs. It makes responses in appropriate formats, for instance, JSON. All you need to do is to retu

Logo by Zhuoning Yuan LibAUC: A Machine Learning Library for AUC Optimization Website | Updates | Installation | Tutorial | Research | Github LibAUC a

Build an Amazon SageMaker Pipeline to Transform Raw Texts to A Knowledge Graph This repository provides a pipeline to create a knowledge graph from ra

PyNode Next A complete rewrite of PyNode for the modern era. Up to five times faster than the original PyNode. PyNode Next allows you to easily create

This repository contains sample code scripts for creating awesome data visualizations from scratch using different python libraries (such as matplotli

Transcript Analysis - Graph + NLP This program extracts insights from Zoom Meeting Transcripts (.vtt) using TigerGraph and NLTK. In order to run this

DAG_Generator Random Directed Acyclic Graph Generator verison1.0 简介 工作流通常由DAG（有向无环图）来定义，其中每个计算任务$T_i$由一个顶点(node,task,vertex)表示。同时，任务之间的每个数据或控制依赖性由一条加权

1 Introduction Official code for article "Expression is enough: Improving traffic signal control with advanced traffic state representation". The code s

Multimodal Trajectory Prediction Conditioned on Lane-Graph Traversals This repository contains code for "Multimodal trajectory prediction conditioned

Mutual Contrastive Learning for Visual Representation Learning This project provides source code for our Mutual Contrastive Learning for Visual Repres

Graph Convolutional Networks with Dual Message Passing for Subgraph Isomorphism Counting and Matching This repository is an official implementation of

Neointerface - Neo4j made easy for Python programmers! A Python interface to use the Neo4j graph database, and simplify its use. class NeoInterface: C

HyFactor Graph-based architectures are becoming increasingly popular as a tool for structure generation. Here, we introduce a novel open-source archit

ForceAtlas2 for Python A port of Gephi's Force Atlas 2 layout algorithm to Python 2 and Python 3 (with a wrapper for NetworkX and igraph). This is the

gdsclient NOTE: This is a work in progress and many GDS features are known to be missing or not working properly. This repo hosts the sources for gdsc

gdsclient This repo hosts the sources for gdsclient, a Python wrapper API for operating and working with the Neo4j Graph Data Science (GDS) library. g

deepGCFX PyTorch implementation for our AAAI 2022 Paper "Graph-wise Common Latent Factor Extraction for Unsupervised Graph Representation Learning" Pr

Contrastive Spatio Temporal Pretext Learning for Self-supervised Video Representation (AAAI 2022) The code for paper "Contrastive Spatio-Temporal Pret

Graph Convolutional Networks with Dual Message Passing for Subgraph Isomorphism Counting and Matching This repository is an official implementation of

Decoupling and Recoupling Spatiotemporal Representation for RGB-D-based Motion Recognition, arxiv This is a PyTorch implementation of our paper. 1. Re

ReFine: Multi-Grained Explainability for GNNs This is the official code for Towards Multi-Grained Explainability for Graph Neural Networks (NeurIPS 20

SSL_OSC Graph Self-Supervised Learning for Optoelectronic Properties of Organic Semiconductors

Documentation | External Resources | Datasets | Examples ChemicalX is a deep learning library for drug-drug interaction, polypharmacy side effect and

G-SimSiam A PyTorch implementation which refers to repo for the paper Exploring Simple Siamese Representation Learning by Xinlei Chen & Kaiming He Add

Scene Representation Networks This is the official implementation of the NeurIPS submission "Scene Representation Networks: Continuous 3D-Structure-Aw

KiwiDB HTTP graph database built in Python 3. Reference Format References are strings in the format: {refIDENTIFIER@GROUP} Authentication Currently, t

Target Adaptive Context Aggregation for Video Scene Graph Generation This is a PyTorch implementation for Target Adaptive Context Aggregation for Vide

ICCV'21 Context-aware Scene Graph Generation with Seq2Seq Transformers Authors: Yichao Lu*, Himanshu Rai*, Cheng Chang*, Boris Knyazev†, Guangwei Yu,

Talking Face Generation by Adversarially Disentangled Audio-Visual Representation (AAAI 2019) We propose Disentangled Audio-Visual System (DAVS) to ad

Graph Notebook: easily query and visualize graphs The graph notebook provides an easy way to interact with graph databases using Jupyter notebooks. Us

Cog - Embedded Graph Database for Python cogdb.io New release: 2.0.5! Installing Cog pip install cogdb Cog is a persistent embedded graph database im

CodeT5: Identifier-aware Unified Pre-trained Encoder-Decoder Models for Code Understanding and Generation This is the official PyTorch implementation

Edge-augmented Graph Transformer Introduction This is the official implementation of the Edge-augmented Graph Transformer (EGT) as described in https:

DeBERTa: Decoding-enhanced BERT with Disentangled Attention This repository is the official implementation of DeBERTa: Decoding-enhanced BERT with Dis

CGPN This is the repository for the NeurIPS-21 paper [Contrastive Graph Poisson Networks: Semi-Supervised Learning with Extremely Limited Labels]. Req

Gihan Jayatilaka*, Jameel Hassan*, Suren Sritharan*, Janith Senananayaka, Harshana Weligampola, et. al., 2021. Holistic Interpretation of Public Scenes Using Computer Vision and Temporal Graphs to Identify Social Distancing Violations. arXiv preprint.

Decentralised graph database management system To get started clone the repo, and run the command below. python3 database.py Now, create a new termina

Introduction This is the source code of our TCSVT 2021 paper "MARS: Learning Modality-Agnostic Representation for Scalable Cross-media Retrieval". Ple

Docker Network Graph Visualize the relationship between Docker networks and containers as a neat graphviz graph. Example Usage usage: docker-net-graph

Hierarchical Clustering: O(1)-Approximation for Well-Clustered Graphs This repository contains code to accompany the paper "Hierarchical Clustering: O

Dual Correlation Reduction Network An official source code for paper Deep Graph Clustering via Dual Correlation Reduction, accepted by AAAI 2022. Any

Sparse Structure Learning via Graph Neural Networks for inductive document classification Make graph dataset create co-occurrence graph for datasets.

Self-Supervised Learning (SimCLR) with Biological Plausible Image Augmentations Official code base for the poster "On the use of Cortical Magnificatio

How to apply? Create your config.ini file following the example provided in config.ini Choose one of the options below to run: Run with Python3 pip in

SHGNN: Structure-Aware Heterogeneous Graph Neural Network The source code and dataset of the paper: SHGNN: Structure-Aware Heterogeneous Graph Neural

Lambekseq "Everyone who failed Greek or Latin hates it." This package is for proving theorems in Categorial grammars (CG) and constructing semantic gr

RDFLib RDFLib is a pure Python package for working with RDF. RDFLib contains most things you need to work with RDF, including: parsers and serializers

PyG (PyTorch Geometric) is a library built upon PyTorch to easily write and train Graph Neural Networks (GNNs) for a wide range of applications related to structured data.

# 1. Installing Maven & Pandas First, please install Java (JDK11) and Python 3 if they are not already. Next, make sure that Maven (for importing J

LUNAR Official Implementation of "LUNAR: Unifying Local Outlier Detection Methods via Graph Neural Networks" Adam Goodge, Bryan Hooi, Ng See Kiong and

Contents AnonyGAN Installation Dataset Preparation Generating Images Using Pretrained Model Train and Test New Models Evaluation Acknowledgments Citat

Monte Carlo python simulation Install linux dependencies sudo apt update sudo apt install build-essential \ software-properties-commo

KIDA: Knowledge Inheritance in Data Aggregation This project releases our 1st place solution on NeurIPS2021 ML4CO Dual Task. Slide and model weights a

Token: Token-based Representation for Image Retrieval PyTorch training code for Token-based Representation for Image Retrieval. We propose a joint loc

CogniPy for Pandas - In-memory Graph Database and Knowledge Graph with Natural Language Interface Whats in the box Reasoning, exploration of RDF/OWL,

WSDM 2022 Large-scale Temporal Graph Link Prediction - Baseline and Initial Test Set WSDM Cup Website link Link to this challenge This branch offers A

HetGAN Implementation of Heterogeneous Graph Attention Network This is the code repository of paper "Prediction of Metro Ridership During the COVID-19

Knowledge Graph Embeddings and Chemical Effect Prediction, 2020. Scripts and outputs related to the paper Prediction of Adverse Biological Effects of

CMSF Official Code for "Constrained Mean Shift Using Distant Yet Related Neighbors for Representation Learning" Requirements Python = 3.7.6 PyTorch

Enhancing Column Generation by a Machine-Learning-BasedPricing Heuristic for Graph Coloring (to appear at AAAI 2022) We propose a machine-learning-bas

AKGNN The source code for Adaptive Kernel Graph Neural Network at AAAI2022. Please cite our paper if you think our work is helpful to you: @inproceedi

Wikidated Wikidated 1.0 is a dataset of Wikidata’s full revision history, which encodes changes between Wikidata revisions as sets of deletions and ad

A Shared Representation for Photorealistic Driving Simulators The official code for the paper: "A Shared Representation for Photorealistic Driving Sim

Compressive Visual Representations This repository contains the source code for our paper, Compressive Visual Representations. We developed informatio

    VarCLR: Variable Representation Pre-training via Contrastive Learning New: Paper accepted by ICSE 2022. Preprint at arXiv! This repository contain

DiffMG This repository contains the code for our KDD 2021 Research Track paper: DiffMG: Differentiable Meta Graph Search for Heterogeneous Graph Neura

ECRT: Energy-based Causal Representation Transfer Code for Supercharging Imbalanced Data Learning With Energy-basedContrastive Representation Transfer

PyCRE Conflict-aware Inference of Python Compatible Runtime Environments with Domain Knowledge Graph, ICSE 2022 Dependencies This project is developed

LUNAR Official Implementation of "LUNAR: Unifying Local Outlier Detection Methods via Graph Neural Networks" Adam Goodge, Bryan Hooi, Ng See Kiong and

CRGNN Paper ： Improving the Training of Graph Neural Networks with Consistency Regularization Environments Implementing environment: GeForce RTX™ 3090

Localized Vision-Text Pre-Training Contrastive learning has proven effective for pre- training image models on unlabeled data and achieved great resul