Python Graph-representation Resources

Benchmarking Graph Neural Networks Updates Nov 2, 2020 Project based on DGL 0.4.2. See the relevant dependencies defined in the environment yml files

GAT Graph Attention Networks (Veličković et al., ICLR 2018): https://arxiv.org/abs/1710.10903 GAT layer t-SNE + Attention coefficients on Cora Overvie

Residual Gated Graph ConvNets April 24, 2018 Xavier Bresson http://www.ntu.edu.sg/home/xbresson https://github.com/xbresson https://twitter.com/xbress

DeepGCNs: Can GCNs Go as Deep as CNNs? In this work, we present new ways to successfully train very deep GCNs. We borrow concepts from CNNs, mainly re

A new codebase for popular Scene Graph Generation methods (2020). Visualization & Scene Graph Extraction on custom images/datasets are provided. It's also a PyTorch implementation of paper “Unbiased Scene Graph Generation from Biased Training CVPR 2020”

Markov Chain Composer Using Markov Chain to represent relationships between words in song lyrics and then generating new lyrics.. ahem interpretive po

What's New Sep 2021: We host a challenge in AAAI workshop: The 2nd Self-supervised Learning for Audio and Speech Processing! See SUPERB official site

GraPE GraPE (Graph Processing and Embedding) is a fast graph processing and embedding library, designed to scale with big graphs and to run on both of

A GOOD REPRESENTATION DETECTS NOISY LABELS This code is a PyTorch implementation of the paper: Prerequisites Python 3.6.9 PyTorch 1.7.1 Torchvision 0.

DuoRec Code for WSDM 2022 paper, Contrastive Learning for Representation Degeneration Problem in Sequential Recommendation. Usage Download datasets fr

Variational Graph Auto-encoder in Pytorch This repository implements variational graph auto-encoder by Thomas Kipf. For details of the model, refer to

This is a repository for the paper of "Well-classified Examples are Underestimated in Classification with Deep Neural Networks" The implementation and

SSSNET SSSNET: Semi-Supervised Signed Network Clustering For details, please read our paper. Environment Setup Overview The project has been tested on

CPC_DeepCluster This is the implementation of "SELF SUPERVISED REPRESENTATION LEARNING WITH DEEP CLUSTERING FOR ACOUSTIC UNIT DISCOVERY FROM RAW SPEEC

Motif-based Graph Self-Supervised Learning for Molecular Property Prediction Official Pytorch implementation of NeurIPS'21 paper "Motif-based Graph Se

Corp-Rel is a PoC of Corpartion Relationship Knowledge Graph System. It's built on top of the Open Source Graph Database: Nebula Graph with a dataset

Revitalizing CNN Attention via Transformers in Self-Supervised Visual Representation Learning This repository is the official implementation of CARE.

Select, Reduce, Connect This repository contains the code used for the experiments of: "Understanding Pooling in Graph Neural Networks" Setup Install

Multi-modal Interaction Graph Convolutioal Network for Temporal Language Localization in Videos Official implementation for Multi-Modal Interaction Gr

MMSceneGraph Introduction MMSceneneGraph is an open source code hub for scene graph generation as well as supporting downstream tasks based on the sce

3D Infomax improves GNNs for Molecular Property Prediction Video | Paper We pre-train GNNs to understand the geometry of molecules given only their 2D

Revitalizing CNN Attention via Transformers in Self-Supervised Visual Representation Learning

Select, Reduce, Connect This repository contains the code used for the experiments of: "Understanding Pooling in Graph Neural Networks" Setup Install

AASIST This repository provides the overall framework for training and evaluating audio anti-spoofing systems proposed in 'AASIST: Audio Anti-Spoofing

SubTab: Author: Talip Ucar ([email protected]) The official implementation of the paper, SubTab: Subsetting Features of Tabular Data for Self-Supervis

DSIG Deep Structured Instance Graph for Distilling Object Detectors Authors: Yixin Chen, Pengguang Chen, Shu Liu, Liwei Wang, Jiaya Jia. [pdf] [slide]

A-SDF: Learning Disentangled Signed Distance Functions for Articulated Shape Representation (ICCV 2021) This repository contains the official implemen

A framework for building (and incrementally growing) graph-based data structures used in hierarchical or DAG-structured clustering and nearest neighbor search

Permute Me Softly: Learning Soft Permutations for Graph Representations

Relation Prediction as an Auxiliary Training Objective for Knowledge Base Completion This repo provides the code for the paper Relation Prediction as

A graph neural network (GNN) model to predict protein-protein interactions (PPI) with no sample features

A geometric deep learning pipeline for predicting protein interface contacts.

A framework for evaluating Knowledge Graph Embedding Models in a fine-grained manner.

Float2Binary A simple python class which finds the binary representation of a floating-point number. You can find a class in IEEE754.py file with the

GNNLens2 is an interactive visualization tool for graph neural networks (GNN).

CodeT5: Identifier-aware Unified Pre-trained Encoder-Decoder Models for Code Understanding and Generation This is the official PyTorch implementation

DGCNN is the author's re-implementation of Dynamic Graph CNN, which achieves state-of-the-art performance on point-cloud-related high-level tasks including category classification, semantic segmentation and part segmentation.

3D-Transformer: Molecular Representation with Transformer in 3D Space

SCoRe: Pre-Training for Context Representation in Conversational Semantic Parsing This repository contains code for the ICLR 2021 paper "SCoRE: Pre-Tr

GRF: Learning a General Radiance Field for 3D Representation and Rendering [Paper] [Video] GRF: Learning a General Radiance Field for 3D Representatio

VectorNet Re-implementation This is the unofficial pytorch implementation of CVPR2020 paper "VectorNet: Encoding HD Maps and Agent Dynamics from Vecto

IGMTF The source code and data of the paper "Instance-wise Graph-based Framework for Multivariate Time Series Forecasting". Requirements The framework

Pointly-supervised 3D Scene Parsing with Viewpoint Bottleneck Paper Created by Liyi Luo, Beiwen Tian, Hao Zhao and Guyue Zhou from Institute for AI In

GLaRA: Graph-based Labeling Rule Augmentation for Weakly Supervised Named Entity Recognition

Splitter ⠀⠀ A PyTorch implementation of Splitter: Learning Node Representations that Capture Multiple Social Contexts (WWW 2019). Abstract Recent inte

ConvE Convolutional 2D Knowledge Graph Embeddings resources. Paper: Convolutional 2D Knowledge Graph Embeddings Used in the paper, but do not use thes

The PASS dataset: pretrained models and how to get the data - PASS: Pictures without humAns for Self-Supervised Pretraining

Graphlevel-SSL Overview Apply Graph Self-Supervised Learning methods to graph-level task(TUDataset, MolculeNet Dataset). It is unified framework to co

Dynamic Attentive Graph Learning for Image Restoration This repository is for GATIR introduced in the following paper: Chong Mou, Jian Zhang, Zhuoyuan

fastText fastText is a library for efficient learning of word representations and sentence classification. Table of contents Resources Models Suppleme

SE Aggregation This is the implementation for Rethinking High-order Graph Convolutional Networks. Here we show the codes for citation networks as an e

CRL_EGPG Pytorch Implementation of Contrastive Representation Learning for Exemplar-Guided Paraphrase Generation We use contrastive loss implemented b

AAGCN-ACSA EMNLP 2021 Introduction This repository was used in our paper: Beta Distribution Guided Aspect-aware Graph for Aspect Category Sentiment An

Pyan takes one or more Python source files, performs a (rather superficial) static analysis, and constructs a directed graph of the objects in the combined source, and how they define or use each other. The graph can be output for rendering by GraphViz or yEd.

Pointly-supervised 3D Scene Parsing with Viewpoint Bottleneck Paper Created by Liyi Luo, Beiwen Tian, Hao Zhao and Guyue Zhou from Institute for AI In

DeepPanoContext (DPC) [Project Page (with interactive results)][Paper] DeepPanoContext: Panoramic 3D Scene Understanding with Holistic Scene Context G

This is an open-source toolkit for Heterogeneous Graph Neural Network(OpenHGNN) based on DGL [Deep Graph Library] and PyTorch.

Spatio-temporal Self-Supervised Representation Learning for 3D Point Clouds This is the official code implementation for the paper "Spatio-temporal Se

CTR-GCN This repo is the official implementation for Channel-wise Topology Refinement Graph Convolution for Skeleton-Based Action Recognition. The pap

Object-aware Contrastive Learning Official PyTorch implementation of "Object-aware Contrastive Learning for Debiased Scene Representation" by Sangwoo

MVGCN MVGCN: a novel multi-view graph convolutional network (MVGCN) framework for link prediction in biomedical bipartite networks. Developer: Fu Hait

Adaptive Graph Convolution for Point Cloud Analysis This repository contains the implementation of AdaptConv for point cloud analysis. Adaptive Graph

Graph2Pix: A Graph-Based Image to Image Translation Framework Installation Install the dependencies in env.yml $ conda env create -f env.yml $ conda a

Single Node Injection Attack against Graph Neural Networks This repository is our Pytorch implementation of our paper: Single Node Injection Attack ag

ANEMONE A PyTorch implementation of "ANEMONE: Graph Anomaly Detection with Multi-Scale Contrastive Learning", CIKM-21 Dependencies python==3.6.1 dgl==

近年来，图计算在搜索、推荐和风控等场景中获得显著的效果，但也面临超大规模异构图训练，与现有的深度学习框架Tensorflow和PyTorch结合等难题。 Galileo（伽利略）是一个图深度学习框架，具备超大规模、易使用、易扩展、高性能、双后端等优点，旨在解决超大规模图算法在工业级场景的落地难题，提

HyperNeRF: A Higher-Dimensional Representation for Topologically Varying Neural Radiance Fields This is the code for "HyperNeRF: A Higher-Dimensional

✨A Python framework to explore, label, and monitor data for NLP projects

ZSL-KG is a general-purpose zero-shot learning framework with a novel transformer graph convolutional network (TrGCN) to learn class representa

GraphKer Open Source Tool - Cybersecurity Graph Database in Neo4j |G|r|a|p|h|K|e|r| { open source tool for a cybersecurity graph database in neo4j } W

PyTorch implementation of SimCLR: A Simple Framework for Contrastive Learning of Visual Representations

COTREC Codes for CIKM'21 paper 'Self-Supervised Graph Co-Training for Session-based Recommendation'. Requirements: Python 3.7, Pytorch 1.6.0 Best Hype

MWPToolkit is a PyTorch-based toolkit for Math Word Problem (MWP) solving. It is a comprehensive framework for research purpose that integrates popular MWP benchmark datasets and typical deep learning-based MWP algorithms.

Poplar Implementation of Bundle Adjustment using Gaussian Belief Propagation on Graphcore's IPU Implementation of CVPR 2020 paper: Bundle Adjustment o

Multimodal Deep Learning 🎆 🎆 🎆 Announcing the multimodal deep learning repository that contains implementation of various deep learning-based model

SGLKT-VisDial Pytorch Implementation for the paper: Reasoning Visual Dialog with Sparse Graph Learning and Knowledge Transfer Gi-Cheon Kang, Junseok P

CSGStumpNet The official implementation of CSG-Stump: A Learning Friendly CSG-Like Representation for Interpretable Shape Parsing Paper | Project page

ManipNet: Neural Manipulation Synthesis with a Hand-Object Spatial Representation - SIGGRAPH 2021 Dataset Code Demos Authors: He Zhang, Yuting Ye, Tak

GraphGT: Machine Learning Datasets for Graph Generation and Transformation Dataset Website | Paper Installation Using pip To install the core environm

Differentiable Factor Graph Optimization for Learning Smoothers Overview Status Setup Datasets Training Evaluation Acknowledgements Overview Code rele

CrowdNav with Social-NCE This is an official implementation for the paper Social NCE: Contrastive Learning of Socially-aware Motion Representations by

DSANet: Dynamic Segment Aggregation Network for Video-Level Representation Learning (ACMMM 2021) Overview We release the code of the DSANet (Dynamic S

PyNIF3D is an open-source PyTorch-based library for research on neural implicit functions (NIF)-based 3D geometry representation. It aims to accelerate research by providing a modular design that allows for easy extension and combination of NIF-related components, as well as readily available paper implementations and dataset loaders.

Using a predicted aligned error matrix corresponding to an AlphaFold2 model , returns a series of lists of residue indices, where each list corresponds to a set of residues clustering together into a pseudo-rigid domain.

Bag of Tricks for Training Deeper Graph Neural Networks: A Comprehensive Benchmark Study Codes for [Preprint] Bag of Tricks for Training Deeper Graph

Filtration Curves for Graph Representation This repository provides the code from the KDD'21 paper Filtration Curves for Graph Representation. Depende

MERIT A PyTorch implementation of our IJCAI-21 paper Multi-Scale Contrastive Siamese Networks for Self-Supervised Graph Representation Learning. Depen

Graph-Based Local Trajectory Planner The graph-based local trajectory planner is python-based and comes with open interfaces as well as debug, visuali

GenRep Project Page | Paper Generative Models as a Data Source for Multiview Representation Learning Ali Jahanian, Xavier Puig, Yonglong Tian, Phillip

SpiderFoot Neo4j Tools Import, visualize, and analyze SpiderFoot OSINT data in Neo4j, a graph database Step 1: Installation NOTE: This installs the sf

SIGIR2021-EGLN The implement of paper "Enhanced Graph Learning for Collaborative Filtering via Mutual Information Maximization" Neural graph based Col

Torch-RGCN Torch-RGCN is a PyTorch implementation of the RGCN, originally proposed by Schlichtkrull et al. in Modeling Relational Data with Graph Conv

README.md shall be finished soon. WSSGG 0 Overview 1 Installation 1.1 Faster-RCNN 1.2 Language Parser 1.3 GloVe Embeddings 2 Settings 2.1 VG-GT-Graph

Improving Graph Neural Network Expressivity via Subgraph Isomorphism Counting Official PyTorch implementation of the paper: Improving Graph Neural Net

st-nerf We provide PyTorch implementations for our paper: Editable Free-viewpoint Video Using a Layered Neural Representation SIGGRAPH 2021 Jiakai Zha

Ἀνατομή is a PyTorch library to analyze representation of neural networks

Graph ConvNets in PyTorch October 15, 2017 Xavier Bresson http://www.ntu.edu.sg/home/xbresson https://github.com/xbresson https://twitter.com/xbresson

Graph Convolutional Networks in PyTorch PyTorch implementation of Graph Convolutional Networks (GCNs) for semi-supervised classification [1]. For a hi

PanGraphViewer -- show panenome graph in an easy way Table of Contents Versions and dependences Desktop-based panGraphViewer Library installation for

Graph Convolutional Networks for Hyperspectral Image Classification Danfeng Hong, Lianru Gao, Jing Yao, Bing Zhang, Antonio Plaza, Jocelyn Chanussot T