Python Long-read-sequencing Resources

Nested Collaborative Learning for Long-Tailed Visual Recognition This repository is the official PyTorch implementation of the paper in CVPR 2022: Nes

Hacktoberfest_2021 If you looking for your first contribution, we are here to help. Just create a simple program using any language you like in our fo

tg-manga-bot Read manga from your favourites websites on telegram. Current Development Bot @idkpythonbot Telegram Channel tg_manga_bot Commands start

ELAN Codes for "Efficient Long-Range Attention Network for Image Super-resolution", arxiv link. Dependencies & Installation Please refer to the follow

WIE-WoC IEEE-WIE presents WIE Week of Code (WIEWoC), a 3-days long open-source contribution event starting from 1st March, highlighting different pyth

ParsBigBird: Persian Bert For Long-Range Sequences The Bert and ParsBert algorithms can handle texts with token lengths of up to 512, however, many ta

mokuro Read Japanese manga with selectable text inside a browser. See demo: https://kha-white.github.io/manga-demo mokuro_demo.mp4 Demo contains excer

AdapterBias: Parameter-efficient Token-dependent Representation Shift for Adapters in NLP Tasks arXiv link: upcoming To be published in Findings of NA

Nanopore-Workflow Snakemake workflow to process and filter long read data from Oxford Nanopore Technologies. It is designed to compare whole human gen

On Size-Oriented Long-Tailed Graph Classification of Graph Neural Networks We provide the code (in PyTorch) and datasets for our paper "On Size-Orient

Likert Scoring with Grade Decoupling for Long-term Action Assessment This is the code for CVPR2022 paper "Likert Scoring with Grade Decoupling for Lon

PyOpenVINO - An Experimental Python Implementation of OpenVINO Inference Engine (minimum-set) Description The PyOpenVINO is a spin-off product from my

MRS-SLAM for long-term place recognition In this work, we imply an multi-resolution sambling based visual place recognition method. This work is based

prompts read a textfile of prompts and import into anki via ankiconnect Usage In

Metadata Extractor The exifextract script can be used to read in exif metadata f

💾 MicroStealer ⚡ A compact Discord Token Logger/Discord Token Grabber made in o

In our solution based on plotly, dash and influxdb, the user will firstly generate the specifications for different robots, and then a wide range of interactive visualizations for different machines for machine power, machine cost, and total cost based on the energy time and total energy getting dynamically from sensors. If a threshold is met, the alert email is generated for further operation.

QR Code Application This is a basic QR Code application. Using this application you can generate QR code for you text/links. Using this application yo

Survival Game Simple game where you try to survive as long as you can on screen. Play To run, download the code and run the survival_game.py file. Fro

Analysis of SARS-CoV-2 reads in sequencing of 2018-2019 Antarctica samples in PRJNA692319 The samples analyzed here are described in this preprint, wh

find_te_ins find_te_ins is designed to find Transposon Element (TE) insertions using long reads (nanopore), by alignment directly. (minimap2) Install

TailCalibX : Feature Generation for Long-tail Classification by Rahul Vigneswaran, Marc T. Law, Vineeth N. Balasubramanian, Makarand Tapaswi [arXiv] [

s3sec Test AWS S3 buckets for read/write/delete access This tool was developed to quickly test a list of s3 buckets for public read, write and delete

Tracks how much money a profile has in their bank and graphs it, as long as they enable the bank api. (you could really use this to track anything from the hypixel api)

This is an easy to use Python library which allows you to make your terminal out

Users can read others' travel journeys in addition to being able to upload and delete posts detailing their own experiences! Posts are organized by country and destination within that country.

A simple python script to dump remote files through a local file read or local file inclusion web vulnerability. Features Dump a single file w

Inspectral Spectral decomposition for characterizing long-range interaction prof

An advanced software to keep you notes. It allows users to perform CRUD operations on theirs Notes. Was implemented Authorization and Authentication

Realtime read-write with AJAX Hey,this is the basic implementation type of ajax realtime read write from the database. where you can insert or view re

nft-stats Get the nftables counters easier to read It kind of hard to read the output of nft list ruleset so there is a small program parcising the ou

This a blogging site where people can make their accout and write blogs and read other author's blogs.

一个关于所有格式文件读取的方法 1。 问题描述： 各种各样的文件格式，读写操作非常的麻烦，能够有一种方法，可以整合所有格式的文件，方便用户进行读取和写入。 2

Django URL Shortener This project is just a complete and production-ready URL shortener web application to show off my tech and coding abilities. Impo

News Headlines Generator bunnysaini/Generate-Headlines Goal This project aims to generate news headlines using a Long Short-Term Memory (LSTM) neural

ShadowClone allows you to distribute your long running tasks dynamically across thousands of serverless functions and gives you the results within seconds where it would have taken hours to complete

Information : Hello, thank you for reading this first of all. This is a Aula-API

Blackstone Blackstone is a spaCy model and library for processing long-form, unstructured legal text. Blackstone is an experimental research project f

WARP+ uses Cloudflare’s virtual private backbone, known as Argo, to achieve higher speeds and ensure your connection is encrypted across the long haul of the Internet

Memory Compressed Attention Implementation of the Self-Attention layer of the proposed Memory-Compressed Attention, in Pytorch. This repository offers

ContinualPassageRanking Repository for the paper "Continual Learning of Long Topic Sequences in Neural Information Retrieval". In this repository you

Long text token classification using LongFormer

Read and write layered TIFF ImageSourceData and ImageResources tags Psdtags is a Python library to read and write the Adobe Photoshop(r) specific Imag

A Python library that provides basic functions to read / write Aseprite format files

1. What does this library do? Its task is simple: It tells you which language some provided textual data is written in. This is very useful as a prepr

VL-LTR: Learning Class-wise Visual-Linguistic Representation for Long-Tailed Visual Recognition Usage First, install PyTorch 1.7.1+, torchvision 0.8.2

This repository contains the code for the paper Localization and multifractal properties of the long-range Kitaev chain in the presence of an Aubry-André-Harper modulation.

Classification of Long Sequential Data using Circular Dilated Convolutional Neural Networks arXiv preprint: https://arxiv.org/abs/2201.02143. Architec

SCROLLS This repository contains the official code of the paper: "SCROLLS: Standardized CompaRison Over Long Language Sequences". Links Official Websi

Discovering local read-level DNA methylation patterns and DNA methylation heterogeneity in intermediately methylated regions

DialogLM Code for AAAI 2022 paper: DialogLM: Pre-trained Model for Long Dialogue Understanding and Summarization. Pre-trained Models We release two ve

This application aims to read all wifi passwords and visualizes the complexity in graph formation by taking into account several criteria and help you generate new random passwords.

Sign Language Recognition Service This is a Sign Language Recognition service utilizing a deep learning model with Long Short-Term Memory to perform s

ACE: Ally Complementary Experts for Solving Long-Tailed Recognition in One-Shot This repository is the official PyTorch implementation of ICCV-21 pape

OpenFaas Job Worker OpenFaas Job Worker is a fork of project : OSCAR Worker - https://github.com/grycap/oscar-worker Thanks to Sebástian Risco @srisco

Handles SDVX EXCEED GEAR result screen photos and attempts to read it.

Help-Me-Read A web application created with Flask + BootStrap + HuggingFace 🤗 to generate summary and question-answer from given input text. It uses

Supplementary Materials for CEMENT: Incomplete Multi-View Weak-Label Learning with Long-Tailed Labels This repository includes all supplementary mater

Predictive-Maintenance-LSTM - Predictive maintenance study for Complex case study, we've obtained failure causes by operational error and more deeply by design mistakes.

IMBENS: Class-imbalanced Ensemble Learning in Python Language: English | Chinese/中文 Links: Documentation | Gallery | PyPI | Changelog | Source | Downl

warp-cli-gui GUI app to read settings and stats from Cloudflare WARP CLI for Linux, and change some settings. Description Python program that will int

⚙️ Compile, Read and update your .conf file in python

[AAAI22] Cross-Domain Empirical Risk Minimization for Unbiased Long-tailed Classification We point out the overlooked unbiasedness in long-tailed clas

ALiBi PyTorch implementation of Train Short, Test Long: Attention with Linear Biases Enables Input Length Extrapolation. Quickstart Clone this reposit

Instagram Bot 🤖 July 14, 2021 Overview 👍 A multifunctionality automated instagram bot that can mass text users, receive and read a message and store

Pango lineage information for German SARS-CoV-2 sequences This repository contains a join of the metadata and pango lineage tables of all German SARS-

readthedocs-custom-steps A hack to run custom steps when building documentation on Read the Docs. Important: This module should not be installed outsi

Execution After Redirect (EAR) / Long Response Redirection Vulnerability Scanner written in python3, It Fuzzes All URLs of target website & then scan them for EAR

QuALITY: Question Answering with Long Input Texts, Yes! Authors: Richard Yuanzhe Pang,* Alicia Parrish,* Nitish Joshi,* Nikita Nangia, Jason Phang, An

Vital What is Vital? Vital is malware primarily used to collect and extract information from the Discord desktop client. While it has other features (

Here is some Python code that allows you to read in SVG files and approximate their paths using a Fourier series. The Fourier series can be animated and visualized, the function can be output as a two dimensional vector for Desmos and there is a method to output the coefficients as LaTeX code.

longwind Make an audio file (really) long-winded Daily repetitions are an illusion anyway.

Database_Project Prototype ideas for website: Computer Science library (Sells books, products, etc.) Code editor Graph visualizer / creator (can save

RDMolReader An expansion for RDKit to read all types of files in one line How to use? Add this single .py file to your project and import MolFromFile(

dragmap_meth (dragmap_meth.py) Alignment of BS-Seq reads using dragmap. Intro This works for single-end reads and for paired-end reads from the direct

Imagine by Reasoning: A Reasoning-Based Implicit Semantic Data Augmentation for Long-Tailed Classification Prerequisite PyTorch = 1.2.0 Python3 torch

A toolkit for monitoring ONT MinION sequencing, followed by data analysis, for viral genomes amplified with tiled amplicon sequencing.

Longformer Longformer and LongformerEncoderDecoder (LED) are pretrained transformer models for long documents. ***** New December 1st, 2020: Longforme

BP-Transformer This repo contains the code for our paper BP-Transformer: Modeling Long-Range Context via Binary Partition Zihao Ye, Qipeng Guo, Quan G

Status: Archive (code is provided as-is, no updates expected) Update August 2020: For an example repository that achieves state-of-the-art modeling pe

Awesome Long-tailed Recognition A curated list of long-tailed recognition and related resources. Please feel free to pull requests or open an issue to

Forest R-CNN: Large-Vocabulary Long-Tailed Object Detection and Instance Segmentation (ACM MM 2020) Official implementation of: Forest R-CNN: Large-Vo

RangeLoss Pytorch This is a Pytorch reproduction of Range Loss, which is proposed in paper 《Range Loss for Deep Face Recognition with Long-Tailed Trai

DRAGON: From Generalized zero-shot learning to long-tail with class descriptors Paper Project Website Video Overview DRAGON learns to correct the bias

WASP2 (Currently in pre-development): Allele-specific pipeline for unbiased read mapping(WIP), QTL discovery(WIP), and allelic-imbalance analysis Requ

Python-bioformats is a Python wrapper for Bio-Formats, a standalone Java library for reading and writing life sciences image file formats. Bio-Formats

Read and write TIFF files Tifffile is a Python library to store numpy arrays in TIFF (Tagged Image File Format) files, and read image and metadata fro

AdminerRead Exploit tool for Adminer 1.0 up to 4.6.2 Arbitrary File Read vulnerability Installation git clone https://github.com/p0dalirius/AdminerRea

Convert long numbers into a human-readable format in Python

CVE-2021-43798 – Grafana Exploit About This is a proof-of-concept exploit for Grafana's Unauthorized Arbitrary File Read Vulnerability (CVE-2021-43798

pyexcel-xlsx - Let you focus on data, instead of xlsx format pyexcel-xlsx is a tiny wrapper library to read, manipulate and write data in xlsx and xls

Python-Fastprint Python 3 module to print out long strings of text with intervals of time inbetween Install: pip install fastprint Sync Usage: from fa

2021_grafana_arbitrary_file_read base on pocsuite3 try 40 default plugins of grafana alertlist annolist barchart cloudwatch dashlist elasticsearch gra

fulltmdb A wrapper for The Movie Database API v3 and v4 that only uses the read access token (not api key). Installation Use the package manager pip t

Imagine by Reasoning: A Reasoning-Based Implicit Semantic Data Augmentation for Long-Tailed Classification (AAAI 2022) Prerequisite PyTorch = 1.2.0 P

ScisorWiz: Vizualizer for Differential Isoform Expression README ScisorWiz is a linux-based R-package for visualizing differential isoform expression

GitHub | PyPI | Issues pytest-fail-slow is a pytest plugin for making tests fail that take too long to run. It adds a --fail-slow DURATION command-lin

By: Seanpm2001, Et; Al. Top README.md Read this article in a different language Sorted by: A-Z Sorting options unavailable ( af Afrikaans Afrikaans |

Unequal-Training-for-Deep-Face-Recognition-with-Long-Tailed-Noisy-Data. This is the code of CVPR 2019 paper《Unequal Training for Deep Face Recognition

Rethinking Class-Balanced Methods for Long-Tailed Visual Recognition from a Domain Adaptation Perspective [Arxiv] This is PyTorch implementation of th