Python Medical-image-analysis Resources

Unified Instance and Knowledge Alignment Pretraining for Aspect-based Sentiment Analysis Requirements python 3.7 pytorch-gpu 1.7 numpy 1.19.4 pytorch_

single_snake_sequencing - sc/snRNAseq Snakemake Workflow A Snakemake workflow for standardised sc/snRNAseq analysis. Every single cell analysis is sli

Semantic Segmentation using UNET This is the implementation of UNET on Carvana Image Masking Kaggle Challenge About the Dataset This dataset contains

image_to_midi This is a python package that turns any images into MIDI files that views the same as them. This package firstly convert the image to AS

Interactive GrabCut An interactive interface for using OpenCV's GrabCut algorithm for image segmentation. Setup Install dependencies: pip install nump

Revisiting Oxford and Paris: Large-Scale Image Retrieval Benchmarking We revisit and address issues with Oxford 5k and Paris 6k image retrieval benchm

GainedVAE A Pytorch Implementation of a continuously rate adjustable learned image compression framework, Gained Variational Autoencoder(GainedVAE). N

TorchIR: Pytorch Image Registration TorchIR is a image registration library for deep learning image registration (DLIR). I have integrated several ide

Med Phys Scripts These are scripts that I, the medical physics assistant at Cookeville Regional Medical Center, wrote for use in our radiation therapy

Deep Learning for Computer Vision final project

geospatial-data-analysis [readme] Use this code in your Python IDE or notebook to generate a basic Kepler.gl data visualization, without pre-configura

signed-area-causal-inference This repository contains code demonstrating the methods outlined in Path Signature Area-Based Causal Discovery in Coupled

TargetCLIP- official pytorch implementation of the paper Image-Based CLIP-Guided Essence Transfer This repository finds a global direction in StyleGAN

Revealing unforeseen diagnostic image features with deep learning by detecting cardiovascular diseases from apical four-chamber ultrasounds The why Im

SILT: Self-supervised Lighting Transfer Using Implicit Image Decomposition (BMVC 2021) Project repo for the paper SILT: Self-supervised Lighting Trans

Research PACS on AWS Challenge to solve Solution presentation Deploy the solution Further reading Releases License Challenge to solve The rise of new

TargetCLIP- official pytorch implementation of the paper Image-Based CLIP-Guided Essence Transfer This repository finds a global direction in StyleGAN

PyABSA - Open & Efficient for Framework for Aspect-based Sentiment Analysis

Tag Machine A little Python application to auto tag your photos with the power of machine learning. Report a bug or request a feature Table of Content

Visualizing Technical Indicators Using Python and Plotly. Currently facing issues hosting the application on heroku. As soon as I am able to I'll like

Surf's Up Weather analysis with Python, SQLite, SQLAlchemy, and Flask Overview The purpose of this analysis was to examine weather trends (precipitati

SEJE is a prototype for the paper Learning Text-Image Joint Embedding for Efficient Cross-Modal Retrieval with Deep Feature Engineering. Contents Inst

Python library with Neural Networks for Image Segmentation based on PyTorch. The main features of this library are: High level API (just two lines to

Accelerated DL & RL PyTorch framework for Deep Learning research and development. It was developed with a focus on reproducibility, fast experimentati

Super-BPD for Fast Image Segmentation (CVPR 2020) Introduction We propose direction-based super-BPD, an alternative to superpixel, for fast generic im

PyTorch Image Classification Classifies an image as containing either a dog or a cat (using Kaggle's public dataset), but could easily be extended to

pytorch-vgg Some scripts to convert the VGG-16 and VGG-19 models [1] from Caffe to PyTorch. The converted models can be used with the PyTorch model zo

Convolutional Recurrent Neural Network This software implements the Convolutional Recurrent Neural Network (CRNN), a combination of CNN, RNN and CTC l

Dorna-Robotics-Internship Code In the directory "Code" is a python file which I wrote to allow the Dorna Robots API to draw an Image on a 3D plane. I

Adaptive wavelets Wavelets which adapt given data (and optionally a pre-trained model). This yields models which are faster, more compressible, and mo

ASCII art A flask app that turn image into ASCII art. This app has been deployed to https://motmaytinh.herokuapp.com Getting Started These instruction

Congress-Analysis Bar Chart of the number of Senators from each party who are up for election in the next three General Elections This bar chart shows

github_project This is a project for medical image segmentation. This project includes common medical image segmentation models such as U-net, FCN, De

Solution Solución propuesta para el reto BBVA Contigo del Hackathon BBVA 2021. Equipo Mexdapy. Integrantes: David Pedroza Segoviano Regina Priscila Ba

ec2-imagebuilder-ami-share CloudFormation template and CDK stack that contains a CustomResource with Lambda function to allow the setting of the targe

Trash or Treasure? An Interactive Dual-Stream Strategy for Single Image Reflection Separation (NeurIPS 2021) by Qiming Hu, Xiaojie Guo. Dependencies P

What does it do? Given a location and a date, it uses the Nasa Earth API to show a photo taken by the Landsat 8 satellite. The script must be executed

picinpics Script that receives an Image (original) and a set of images to be used as "pixels" in reconstruction of the Original image using the set of

NCNN implementation of Real-ESRGAN. Real-ESRGAN aims at developing Practical Algorithms for General Image Restoration.

Offline Reverse Image Search Overview This app finds duplicate to near duplicate images by generating a hash value for each image stored with a specia

hampp Robotic hamster to give you financial advice. I am not liable for any advice that the hamster gives. Follow at your own peril. Description Hampp

Kaggle: Cell Instance Segmentation The goal of this challenge is to detect cells in microscope images. with simple view on how many cels have been ann

napari-cupy-image-processing GPU-accelerated image processing using cupy and CUDA This napari plugin was generated with Cookiecutter using with @napar

Blockchain-based Medical Records 📄 Abstract Blockchain has the ability to keep an incorruptible, decentralized, and transparent log of all patient da

Comparing Database performance with Django ORM Postgresql MySQL MariaDB SQLite Comparing database operation performance using django ORM. PostgreSQL v

AMAZ3DSim AMAZ3DSim is a lightweight python-based 3D network multi-agent simulator. It uses a cell-based congestion model. It calculates risk, battery

OSS-Net: Memory Efficient High Resolution Semantic Segmentation of 3D Medical Data Christoph Reich, Tim Prangemeier, Özdemir Cetin & Heinz Koeppl | Pr

ElhamBlog Cloud Computing Course first assignment. A simple Blog Using Django Framework and Used IBM Cloud Services for Text Analysis and Text to Spee

douban_embedding 豆瓣中文影评差评分析 1. NLP NLP（Natural Language Processing）是指自然语言处理，他的目的是让计算机可以听懂人话。 下面是我将2万条豆瓣影评训练之后，随意输入一段新影评交给神经网络，最终AI推断出的结果。 "很好，演技不错

CRNN paper：An End-to-End Trainable Neural Network for Image-based Sequence Recognition and Its Application to Scene Text Recognition 1. create your ow

A facial recognition device is a device that takes an image or a video of a human face and compares it to another image faces in a database. The structure, shape and proportions of the faces are compared during the face recognition steps.

ImgAlign For auto aligning, cropping, and scaling HR and LR images for training image based neural networks Usage Make sure OpenCV is installed, 'pip

OSS-Net: Memory Efficient High Resolution Semantic Segmentation of 3D Medical Data Christoph Reich, Tim Prangemeier, Özdemir Cetin & Heinz Koeppl | Pr

MUSIQ: Multi-Scale Image Quality Transformer Unofficial pytorch implementation of the paper "MUSIQ: Multi-Scale Image Quality Transformer" (paper link

Udacity-BikeShare-Project: Python Project on Pro Data Analysis Track Basic Data Exploration with pandas on Bikeshare Data Basic Udacity project using

Documentation for the NASA IDS change analysis Poley 10/21/2021 Required python packages: whitebox numpy rasterio rasterio.mask os glob math itertools

Bi-directional Image and Text Generation UMT-BITG (image & text generator) Unifying Multimodal Transformer for Bi-directional Image and Text Generatio

LMSOC: An Approach for Socially Sensitive Pretraining Code for reproducing the paper LMSOC: An Approach for Socially Sensitive Pretraining to appear a

Trash or Treasure? An Interactive Dual-Stream Strategy for Single Image Reflection Separation (NeurIPS 2021) by Qiming Hu, Xiaojie Guo. Dependencies P

commit-prefix-analysis Script to quickly get the metrics from Github repos to analyze. Setup Install the Github CLI. You'll know its working when runn

This project is based on ultralytics/yolov3. LF-YOLO (Lighter and Faster YOLO) is used to detect defect of X-ray weld image. Download $ git clone http

Self-Supervised Learning of Image Scale and Orientation Estimation (BMVC 2021) This is the official implementation of the paper "Self-Supervised Learn

3d-ken-burns This is a reference implementation of 3D Ken Burns Effect from a Single Image [1] using PyTorch. Given a single input image, it animates

chitra What is chitra? chitra (चित्र) is a multi-functional library for full-stack Deep Learning. It simplifies Model Building, API development, and M

Welcome! I am a computer vision deep learning developer working in Korea. This is my blog, and you can see everything I've studied here. https://www.n

Reddit Bot Project 2: Neural Network Boogaloo Reddit bot that uses sentiment analysis from NLTK.VADER WIP_WIP_WIP_WIP_WIP_WIP Link to test subreddit:

This repository is meant to analyze the ROM images from Norsk Data VDU 301 S as provided at by Torfinn. To combine the two ROM image halves and extrac

What is Retentioneering? Retentioneering is a Python framework and library to assist product analysts and marketing analysts as it makes it easier to

Code for the paper "PICK: Processing Key Information Extraction from Documents using Improved Graph Learning-Convolutional Networks" (ICPR 2020)

WIBAM (Work in progress) Weakly Supervised Training of Monocular 3D Object Detectors Using Wide Baseline Multi-view Traffic Camera Data 3D object dete

CRISPRanalysis InDels analysis of CRISPR lines by NGS amplicon sequencing technology for a multicopy gene family. In this work, we present a workflow

Patch SVDD Patch SVDD for Image anomaly detection. Paper: https://arxiv.org/abs/2006.16067 (published in ACCV 2020). Original Code : https://github.co

Cutting-edge GitHub page customization tool Want to customize your GitHub user page, but don't know how? Now you can make your profile unique and attr

Deep Learning for image classification pip install -r http://webia.lip6.fr/~baskiotisn/requirements-amal.txt Train an autoencoder python3 train_auto

MohammedHussiengadalla-Intelligent-Classification-System-for-Bone-Fractures It is a system used to detect bone fractures. using techniques deep learni

Bi-directional Image and Text Generation UMT-BITG (image & text generator) Unifying Multimodal Transformer for Bi-directional Image and Text Generatio

SegSwap Pytorch implementation of paper "Learning Co-segmentation by Segment Swapping for Retrieval and Discovery" [PDF] [Project page] If our project

ColorPalette A simple web app to extract dominant colors from an image. Demo Live View it live at : https://colorpalettedemo.herokuapp.com/ You can de

Flickr-Faces-HQ Dataset (FFHQ) Flickr-Faces-HQ (FFHQ) is a high-quality image dataset of human faces, originally created as a benchmark for generative

Pluralistic Image Completion ArXiv | Project Page | Online Demo | Video(demo) This repository implements the training, testing and editing tools for "

Scene Graph Benchmark in PyTorch 1.7 This project is based on maskrcnn-benchmark Highlights Upgrad to pytorch 1.7 Multi-GPU training and inference Bat

TagLab: an image segmentation tool oriented to marine data analysis TagLab was created to support the activity of annotation and extraction of statist

starfish: scalable pipelines for image-based transcriptomics starfish is a Python library for processing images of image-based spatial transcriptomics

Color & Depth Renderer for ShapeNet This library includes the tools for rendering multi-view color and depth images of ShapeNet models. Physically bas

📷 This repository is focused on having various feature implementation of OpenCV in Python. The aim is to have a minimal implementation of all OpenCV features together, under one roof.

gallerize Create a static HTML/CSS image gallery from a bunch of images.

Colour - HDRI A Python package implementing various HDRI / Radiance image processing algorithms. It is open source and freely available under the New

seaborn-image: image data visualization Description Seaborn-image is a Python image visualization library based on matplotlib and provides a high-leve

Visage Differentiation Visage Differentiation is a GUI application for outlining and labeling the visages in an image. The main functionality is provi

PyTorch Image Models Sponsors What's New Introduction Models Features Results Getting Started (Documentation) Train, Validation, Inference Scripts Awe

BackgroundRemover BackgroundRemover is a command line tool to remove background from video and image, made by nadermx to power https://BackgroundRemov

SDWNet: A Straight Dilated Network with Wavelet Transformation for Image Deblurring(offical) 1. Introduction This repo is not only used for our paper(

MixNMatch: Multifactor Disentanglement and Encoding for Conditional Image Generation [Paper] Yuheng Li, Krishna Kumar Singh, Utkarsh Ojha, Yong Jae Le

Isaac ROS Image Pipeline Overview This metapackage offers similar functionality as the standard, CPU-based image_pipeline metapackage, but does so by

Alfred Clipboard OCR 注：本仓库基于 oott123/alfred-clipboard-ocr 的逻辑用 Python 重写，换用了有道 AI 的 API，准确率更高，有效防止百度导致隐私泄露等问题，并且有道 AI 初始提供的 50 元体验金对于其资费而言个人用户基本可以永久使用

MevonAI - Speech Emotion Recognition Identify the emotion of multiple speakers in a Audio Segment Report Bug · Request Feature Try the Demo Here Table

AICSImageIO Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Pure Python Features Supports reading metadata and imaging

Image-Viewer Hi! Image-Viewer is a Windows image viewer based on Python 3. Using You must download Image-Viewer.exe from the root of the repository. T

BeeRef — A Simple Reference Image Viewer BeeRef lets you quickly arrange your reference images and view them while you create. Its minimal interface i

n-stage Latent Dirichlet Allocation (n-LDA) Proposed n-LDA & A Novel Approach for classical LDA Latent Dirichlet Allocation (LDA) is a generative prob