Python Medical-image-analysis Resources

PyABSA - Open & Efficient for Framework for Aspect-based Sentiment Analysis Fast & Low Memory requirement & Enhanced implementation of Local Context F

PixelPyramids: Exact Inference Models from Lossless Image Pyramids This repository contains the PyTorch implementation of the paper PixelPyramids: Exa

CoraNet This is the 3D Implementation of 《Inconsistency-aware Uncertainty Estimation for Semi-supervised Medical Image Segmentation》 Environment pytor

README This project provides a rule learning algorithm for the deduction of syndrome definitions from time series data. Large parts of the algorithm a

DeepMTA_PyTorch Officical PyTorch Implementation of "Dynamic Attention-guided Multi-TrajectoryAnalysis for Single Object Tracking", Xiao Wang, Zhe Che

JumpDetectR Name of QuantLet : JumpDetectR Published in : 'To be published as "Jump dynamics in high frequency crypto markets"' Description : 'Scala

On the Analysis of French Phonetic Idiosyncrasies for Accent Recognition With the spirit of reproducible research, this repository contains codes requ

🦙 LaMa Image Inpainting, Resolution-robust Large Mask Inpainting with Fourier Convolutions, WACV 2022

The PyTorch re-implement of a 3D CNN Tracker to extract coronary artery centerlines with state-of-the-art (SOTA) performance. (paper: 'Coronary artery centerline extraction in cardiac CT angiography using a CNN-based orientation classifier')

Image-Optimizer Download and Install git clone https://github.com/stefankumpan/Image-Optimizer-Script.git cd Image-Optimizer-Script pip install -r req

kikuchipy is an open-source Python library for processing and analysis of electron backscatter diffraction (EBSD) patterns. The library builds on the

A Brain Tumor Detection and Classification Model built using RESNET50 architecture. The model is also deployed as a web application using Flask framework.

Generate your very own jerma sus imposter message. Modes: Default Mode: Only supports the characters " ", !, a, b, c, d, e, h, i, m, n, o, p, q, r, s,

Non-destructive, node-based 2D image graphics editor written in Python, focused on simplicity, speed, elegance, and usability

Amazon Forest Computer Vision Satellite Image tagging code using PyTorch / Keras Here is a sample of images we had to work with Source: https://www.ka

Fill holes in binary 2D & 3D images fast.

Automatic_Background_Remover A Web API for automatic background removal using Deep Learning. App is made using Flask and deployed on Heroku. 👉 https:

SQLite Image Handler Simple to use image handler for python sqlite3. Functions Function Name Parameters Returns init databasePath : str tableName : st

QSIprep: Preprocessing and analysis of q-space images Full documentation at https://qsiprep.readthedocs.io About qsiprep configures pipelines for proc

Basketball Team Stats Tool In this project you will be writing a program that reads from the "constants" data (PLAYERS and TEAMS) in constants.py. Thi

Copy Paste positive polyp using poisson image blending for medical image segmentation According poisson image blending I've completely used it for bio

Location-aware Single Image Reflection Removal The shown images are provided by the datasets from IBCLN, ERRNet, SIR2 and the Internet images. The cod

ALL Snow Removed: Single Image Desnowing Algorithm Using Hierarchical Dual-tree Complex Wavelet Representation and Contradict Channel Loss (HDCWNet) (

Focal Frequency Loss - Official PyTorch Implementation This repository provides the official PyTorch implementation for the following paper: Focal Fre

Variable-Rate Deep Image Compression through Spatially-Adaptive Feature Transform This repository is the implementation of "Variable-Rate Deep Image C

StarEnhancer StarEnhancer: Learning Real-Time and Style-Aware Image Enhancement (ICCV 2021 Oral) Abstract: Image enhancement is a subjective process w

Designing a Practical Degradation Model for Deep Blind Image Super-Resolution Kai Zhang, Jingyun Liang, Luc Van Gool, Radu Timofte Computer Vision Lab

crfill Usage | Web App | | Paper | Supplementary Material | More results | code for paper ``CR-Fill: Generative Image Inpainting with Auxiliary Contex

A Collection of Papers and Codes for ICCV2021 Low Level Vision and Image Generation

Image Completion Transformer (ICT) Project Page | Paper (ArXiv) | Pre-trained Models | Supplemental Material This repository is the official pytorch i

⚡ Handwriting Transformers [PDF] Ankan Kumar Bhunia, Salman Khan, Hisham Cholakkal, Rao Muhammad Anwer, Fahad Shahbaz Khan & Mubarak Shah Abstract: We

Documentation The documentation is available on populse_mia's website here Installation From PyPI, for users By cloning the package, for developers Fr

Cutout tools for astronomical images Astrocut provides tools for making cutouts from sets of astronomical images with shared footprints. It is under a

Pure Python implementation of the GIMP image formats (.xcf projects as well as brushes, patterns, etc)

A modern, web-based photo management server. Run it on your home server and it will let you find the right photo from your collection on any device. Smart filtering is made possible by object recognition, face recognition, location awareness, color analysis and other ML algorithms.

impy is All You Need in Image Analysis impy is an all-in-one image analysis library, equipped with parallel processing, GPU support, GUI based tools a

Kimimaro: Skeletonize Densely Labeled Images # Produce SWC files from volumetric images. kimimaro forge labels.npy --progress # writes to ./kimimaro_o

Vignette Vignette is a Python library to create and manage thumbnails following the FreeDesktop standard. Thumbnails are stored in a shared directory

The ScreenTeX project By: Seanpm2001 / ScreenTeX, Et; Al. Top README.md Read this article in a different language 🌐 List of languages Sorted by: A-Z

An Image Captioning codebase This is a codebase for image captioning research. It supports: Self critical training from Self-critical Sequence Trainin

img2texture Command line utility for converting images to seamless tiles. The resulting tiles can be used as textures in games, compositing and 3D mod

A Multi-attribute Controllable Generative Model for Histopathology Image Synthesis This is the pytorch implementation for our MICCAI 2021 paper. A Mul

MODEL SUMMARY 모델의 구조는 크게 6단계로 나뉩니다. STEP 0: Input Image Predict 할 이미지를 모델에 입력합니다. STEP 1: Make Black and White Image STEP 1 은 입력받은 이미지의 글자를 흑색으로, 배경을

Perturber Code for our paper "Interactive Analysis of CNN Robustness" Datasets Feature visualizations: Google Drive Fine-tuning checkpoints as saved m

UWMMSE-stability Tensorflow implementation of Stability Analysis of UWMMSE Overview This library contains a Tensorflow implementation of the paper Sta

UIT-ViSD4SA PACLIC 35 General Introduction This repository contains the data of the paper: Span Detection for Vietnamese Aspect-Based Sentiment Analys

Documentation and issues for Pylance - Fast, feature-rich language support for Python

Self-Attention Context Network for Hyperspectral Image Classification PyTorch implementation of our method for adversarial attacks and defenses in hyp

Diverse Image Inpainting with Bidirectional and Autoregressive Transformers Installation pip install -r requirements.txt Dataset Preparation Given the

Vision Transformer Pytorch reimplementation of Google's repository for the ViT model that was released with the paper An Image is Worth 16x16 Words: T

Is it Time to Replace CNNs with Transformers for Medical Images? Accepted at ICCV-2021: Workshop on Computer Vision for Automated Medical Diagnosis (C

Tindicators is a Python library to calculate the values of various technical indicators

Automatic Image Background Subtraction This repo contains set of scripts for automatic one-shot image background subtraction task using the following

AWS infrastructure to ship CloudTrail logs from S3 to Kinesis This repository contains a Terraform module to ship CloudTrail logs stored in a S3 bucke

Pytorch Implementation of Deep Orthogonal Fusion of Local and Global Features (DOLG) This is the unofficial PyTorch Implementation of "DOLG: Single-St

push-container-image-to-docker-registry 概要 push-container-image-to-docker-registry は、エッジコンピューティング環境において、特定のエッジ端末上の Private Docker Registry に特定のコンテナイメー

Install Library pypi $ pip3 install xremovebg

Detecting Errors and Estimating Accuracy on Unlabeled Data with Self-training Ensembles This project is for the paper: Detecting Errors and Estimating

A Jupyter notebook to play with NVIDIA's StyleGAN3 and OpenAI's CLIP for a text-based guided image generation.

Deep Markov Factor Analysis (DMFA) Codes and experiments for deep Markov factor analysis (DMFA) model accepted for publication at NeurIPS2021: A. Farn

Semi-Supervised Graph Prototypical Networks for Hyperspectral Image Classification, IGARSS, 2021. Bobo Xi, Jiaojiao Li, Yunsong Li and Qian Du. Code f

Image Optimization Using Python steps to run the script run the command to install the required libraries pip install -r requirements.txt create a dir

sentiment-analysis A simple demonstration of integrating a sentiment analysis tool in a django project (watch the video .mp4) To run this project : pi

rscolorq Rust port of Derrick Coetzee's scolorq, based on the 1998 paper "On spatial quantization of color images" by Jan Puzicha, Markus Held, Jens K

Current build status All platforms: Current release info Name Downloads Version Platforms Hapi - Hydrological library for Python Hapi is an open-sourc

ANTsPyNet A collection of deep learning architectures and applications ported to the python language and tools for basic medical image processing. Bas

PyPi Conda The Multi-Mission Maximum Likelihood framework (3ML) A framework for multi-wavelength/multi-messenger analysis for astronomy/astrophysics.

pySPEDAS pySPEDAS is an implementation of the SPEDAS framework for Python. The Space Physics Environment Data Analysis Software (SPEDAS) framework is

Mathematical modeling is a powerful method for the analysis of complex biological systems. Although there are many researches devoted on produ

MaD GUI Machine Learning and Data Analytics Graphical User Interface MaD GUI is a basis for graphical annotation and computational analysis of time se

MONAI Deploy App SDK offers a framework and associated tools to design, develop and verify AI-driven applications in the healthcare imaging domain.

Unsupervised Image Generation with Infinite Generative Adversarial Networks Here is the implementation of MICGANs using DCGAN architecture on MNIST da

HCaptcha solver using requests and an image recognition package! Report Bug · Request Feature Features Image recognition Requests base

A collection of papers about Transformer in the field of medical image analysis.

Neural Rationale Interpretability Analysis We analyze the neural rationale models proposed by Lei et al. (2016) and Bastings et al. (2019), as impleme

unfoldedVBA Unrolled Variational Bayesian Algorithm for Image Blind Deconvolution This repository contains the Pytorch implementation of the unrolled

Semi-supervised Transfer Learning for Image Rain Removal This package contains the Python implementation of "Semi-supervised Transfer Learning for Ima

Feedback Network for Image Super-Resolution [arXiv] [CVF] [Poster] Update: Our proposed Gated Multiple Feedback Network (GMFN) will appear in BMVC2019

Progressive Image Deraining Networks: A Better and Simpler Baseline [arxiv] [pdf] [supp] Introduction This paper provides a better and simpler baselin

SRNTT: Image Super-Resolution by Neural Texture Transfer Tensorflow implementation of the paper Image Super-Resolution by Neural Texture Transfer acce

Gated Multiple Feedback Network for Image Super-Resolution This repository contains the PyTorch implementation for the proposed GMFN [arXiv]. The fram

About PyTorch 1.2.0 Now the master branch supports PyTorch 1.2.0 by default. Due to the serious version problem (especially torch.utils.data.dataloade

IGNN Code repo for "Cross-Scale Internal Graph Neural Network for Image Super-Resolution" [paper] [supp] Prepare datasets 1 Download training dataset

##Dependencies pillow(~2.6.0) Numpy(~1.9.0) If the scripts throw AttributeError: __float__, make sure your pillow has jpeg support e.g. try: $ sudo ap

DID-MDN Density-aware Single Image De-raining using a Multi-stream Dense Network He Zhang, Vishal M. Patel [Paper Link] (CVPR'18) We present a novel d

Spatial Attentive Single-Image Deraining with a High Quality Real Rain Dataset (CVPR'19) Tianyu Wang*, Xin Yang*, Ke Xu, Shaozhe Chen, Qiang Zhang, Ry

Second-order Attention Network for Single Image Super-resolution (CVPR-2019) "Second-order Attention Network for Single Image Super-resolution" is pub

Residual Dense Network for Image Super-Resolution This repository is for RDN introduced in the following paper Yulun Zhang, Yapeng Tian, Yu Kong, Bine

Multi-Scale Progressive Fusion Network for Single Image Deraining (MSPFN) This is an implementation of the MSPFN model proposed in the paper (Multi-Sc

Single Image Deraining Using Bilateral Recurrent Network Introduction Single image deraining has received considerable progress based on deep convolut

DFN：Distributed Feedback Network for Single-Image Deraining Abstract Recently, deep convolutional neural networks have achieved great success for sing

pycls pycls is an image classification codebase, written in PyTorch. It was originally developed for the On Network Design Spaces for Visual Recogniti

PointRend A PyTorch implementation of PointRend: Image Segmentation as Rendering [arxiv] [Official Implementation: Detectron2] This repo for Only Sema

Unet network with mean teacher for altrasound image segmentation

Image Colorization API Machine Learning Model used- https://github.com/richzhang/colorization/tree/caffe Paper - https://arxiv.org/abs/1603.08511 Step

clip-search (WIP) A simple tool for searching images inside a local folder with text/image input using CLIP 10 results for "a blonde woman" in a folde

DeCLIP Supervision Exists Everywhere: A Data Efficient Contrastive Language-Image Pre-training Paradigm. Our paper is available in arxiv Updates ** Ou

Video Scene Cut Detection and Analysis Tool Latest Release: v0.5.6.1 (October 11, 2021) Main Webpage: py.scenedetect.com Documentation: manual.scenede

Collection of Docker images for ML/DL and video processing projects. Overview of images Three types of images differ by tag postfix: base: Python with

image2excel A program which converts images and video into Excel spreadsheets. Usage examples can be found in examples Videos can take a long time to