Python Medical-image-analysis Resources

GeneGAN: Learning Object Transfiguration and Attribute Subspace from Unpaired Data By Shuchang Zhou, Taihong Xiao, Yi Yang, Dieqiao Feng, Qinyao He, W

Exposure: A White-Box Photo Post-Processing Framework ACM Transactions on Graphics (presented at SIGGRAPH 2018) Yuanming Hu1,2, Hao He1,2, Chenxi Xu1,

ComboGAN This is our ongoing PyTorch implementation for ComboGAN. Code was written by Asha Anoosheh (built upon CycleGAN) [ComboGAN Paper] If you use

BicycleGAN Project Page | Paper | Video Pytorch implementation for multimodal image-to-image translation. For example, given the same night image, our

AttnGAN Pytorch implementation for reproducing AttnGAN results in the paper AttnGAN: Fine-Grained Text to Image Generation with Attentional Generative

ABC-GAN The work represented in this repository is the result of a 14 week semesterthesis on photo-realistic image generation using generative adversa

3D-R2N2: 3D Recurrent Reconstruction Neural Network This repository contains the source codes for the paper Choy et al., 3D-R2N2: A Unified Approach f

===================================== README: Inpainting based PatchMatch ===================================== @Author: Younesse ANDAM @Conta

Location-Aware Generative Adversarial Networks (LAGAN) for Physics Synthesis This repository contains all the code used in L. de Oliveira (@lukedeo),

GP-GAN: Towards Realistic High-Resolution Image Blending (ACMMM 2019, oral) [Project] [Paper] [Demo] [Related Work: A2RL (for Auto Image Cropping)] [C

Photo-Realistic-Super-Resoluton Torch Implementation of "Photo-Realistic Single Image Super-Resolution Using a Generative Adversarial Network" [Paper]

srez Image super-resolution through deep learning. This project uses deep learning to upscale 16x16 images by a 4x factor. The resulting 64x64 images

Image Completion with Deep Learning in TensorFlow See my blog post for more details and usage instructions. This repository implements Raymond Yeh and

Context Encoders: Feature Learning by Inpainting CVPR 2016 [Project Website] [Imagenet Results] Sample results on held-out images: This is the trainin

CycleGAN PyTorch | project page | paper Torch implementation for learning an image-to-image translation (i.e. pix2pix) without input-output pairs, for

pix2pix Project | Arxiv | PyTorch Torch implementation for learning a mapping from input images to output images, for example: Image-to-Image Translat

Image De-raining Using a Conditional Generative Adversarial Network [Paper Link] [Project Page] He Zhang, Vishwanath Sindagi, Vishal M. Patel In this

Invertible Conditional GANs This is the implementation of the IcGAN model proposed in our paper: Invertible Conditional GANs for image editing. Novemb

###Generative Adversarial Text-to-Image Synthesis Scott Reed, Zeynep Akata, Xinchen Yan, Lajanugen Logeswaran, Bernt Schiele, Honglak Lee This is the

Text To Image Synthesis Using Thought Vectors This is an experimental tensorflow implementation of synthesizing images from captions using Skip Though

StackGAN Pytorch implementation Inception score evaluation StackGAN-v2-pytorch Tensorflow implementation for reproducing main results in the paper Sta

iGAN: Interactive Image Generation via Generative Adversarial Networks Project | Youtube | Paper Recent projects: [pix2pix]: Torch implementation for

AGIS-Net Introduction This is the official PyTorch implementation of the Artistic Glyph Image Synthesis via One-Stage Few-Shot Learning. paper | suppl

Sentiment Analysis Project This project contains two sentiment analysis programs for Hotel Reviews using a Hotel Reviews dataset from Datafiniti. The

This piece of code is a User Welcomer with Image Manipulation using Python and Pillow (PIL).

Computer Vision Annotation Tool (CVAT) CVAT is free, online, interactive video and image annotation tool for computer vision. It is being used by our

Semantic Image Synthesis with SPADE New implementation available at imaginaire repository We have a reimplementation of the SPADE method that is more

Image Super-Resolution (ISR) The goal of this project is to upscale and improve the quality of low resolution images. This project contains Keras impl

HDBSCAN HDBSCAN - Hierarchical Density-Based Spatial Clustering of Applications with Noise. Performs DBSCAN over varying epsilon values and integrates

FCPS Fundamental Clustering Problems Suite The package provides over sixty state-of-the-art clustering algorithms for unsupervised machine learning pu

tree-SNE t-SNE and hierarchical clustering are popular methods of exploratory data analysis, particularly in biology. Building on recent advances in s

Description Kats is a toolkit to analyze time series data, a lightweight, easy-to-use, and generalizable framework to perform time series analysis. Ti

pmdarima Pmdarima (originally pyramid-arima, for the anagram of 'py' + 'arima') is a statistical library designed to fill the void in Python's time se

pmdarima Pmdarima (originally pyramid-arima, for the anagram of 'py' + 'arima') is a statistical library designed to fill the void in Python's time se

GENDIS GENetic DIscovery of Shapelets In the time series classification domain, shapelets are small subseries that are discriminative for a certain cl

DOS Punk Text Inspired by MAX CAPACITY's DOS Punks & the amazing DOS Punk community. DOS Punk Text is a Python 3 script that renders a DOS Punk image

Fast Image Retrieval (FIRe) is an open source image retrieval project release by Center of Image and Signal Processing Lab (CISiP Lab), Universiti Malaya. This project implements most of the major binary hashing methods to date, together with different popular backbone networks and public datasets.

CSF Code of Classification Saliency-Based Rule for Visible and Infrared Image Fusion Tips: For testing: CUDA_VISIBLE_DEVICES=0 python main.py For trai

Image Quality Assessment using Contrastive Learning Pavan C. Madhusudana, Neil Birkbeck, Yilin Wang, Balu Adsumilli and Alan C. Bovik This is the offi

Frequency Domain Image Translation: More Photo-realistic, Better Identity-preserving This is the source code for our paper Frequency Domain Image Tran

An experimental Python-to-C transpiler and domain specific language for embedded high-performance computing

SSRL-for-image-classification Semi-supervised Representation Learning for Remote Sensing Image Classification Based on Generative Adversarial Networks

Fast Image Retrieval (FIRe) is an open source image retrieval project release by Center of Image and Signal Processing Lab (CISiP Lab), Universiti Malaya. This project implements most of the major binary hashing methods to date, together with different popular backbone networks and public datasets.

CenterPose Overview This repository is the official implementation of the paper "Single-stage Keypoint-based Category-level Object Pose Estimation fro

Pnuemonia Normal detection by using XRay images. Got image datas from kaggle(link is given in sources.txt file) also normal xray images from other site (also link is given) in order to avoid data disbalancing.

Deceive D: Adaptive Pseudo Augmentation for GAN Training with Limited Data (NeurIPS 2021) This repository will provide the official PyTorch implementa

Welcome to Official repository of deepflash2 - a deep-learning pipeline for segmentation of ambiguous microscopic images. Quick Start in 30 seconds se

CID3 This is a full-featured Decision Trees and Random Forests learner. It can save trees or forests to disk for later use. It is possible to query tr

Memotion Analysis Through The Lens Of Joint Embedding This repository contains the experiments conducted as described in the paper 'Memotion Analysis

kwd-extraction-study This repository is maintained for the scientific paper tittled " Study of keyword extraction techniques for Electric Double Layer

Stochastic Model Building (SMB) This repository includes a new fast and robust stochastic optimization algorithm for training deep learning models. Th

ISC-Track2-Submission The codes and related files to reproduce the results for Image Similarity Challenge Track 2. Required dependencies To begin with

ISC-Track1-Submission The codes and related files to reproduce the results for Image Similarity Challenge Track 1. Required dependencies To begin with

Spectral-spatial contrastive clustering (SSCC) Yaoming Cai, Yan Liu, Zijia Zhang, Zhihua Cai, and Xiaobo Liu, Large-scale Hyperspectral Image Clusteri

Stochastic Extragradient: General Analysis and Improved Rates This repository is the official implementation of the paper "Stochastic Extragradient: G

PythonImage2PDF A simple Python script to convert multiple images into a single PDF-document. Created basically for only my own needs for converting m

imgAnalyser - Un script pour obtenir la liste des pixels d'une image correspondant à plusieurs couleurs Ce script à pour but, à partir d'une image, de

Image processing using OpenCv Write a program that opens the webcam, and the user selects one of the following on the video: ✅ If the user presses the

Fast Image Retrieval is an open source image retrieval framework release by Center of Image and Signal Processing Lab (CISiP Lab), Universiti Malaya. This framework implements most of the major binary hashing methods, together with both popular backbone networks and public datasets.

Interactive Web App with Streamlit and Scikit-learn that applies different Classification algorithms to popular datasets Datasets Used: Iris dataset,

gtk-image-selector This is an attempt to restore Gtk Image Chooser "lost functionality": displaying an image preview when selecting images... This is

The code in this toolbox implements the "Spectralformer: Rethinking hyperspectral image classification with transformers". More specifically, it is detailed as follow.

Introduction MASS allows you to search a time series for a subquery resulting in an array of distances. These array of distances enable you to identif

QuantStats: Portfolio analytics for quants QuantStats Python library that performs portfolio profiling, allowing quants and portfolio managers to unde

scikit-survival scikit-survival is a Python module for survival analysis built on top of scikit-learn. It allows doing survival analysis while utilizi

survivalstan: Survival Models in Stan author: Jacki Novik Overview Library of Stan Models for Survival Analysis Features: Variety of standard survival

PySurvival What is Pysurvival ? PySurvival is an open source python package for Survival Analysis modeling - the modeling concept used to analyze or p

Package: dsm Python package dsm provides an API to train the Deep Survival Machines and associated models for problems in survival analysis. The under

Banpei Banpei is a Python package of the anomaly detection. Anomaly detection is a technique used to identify unusual patterns that do not conform to

Causal Inference 360 A Python package for inferring causal effects from observational data. Description Causal inference analysis enables estimating t

moDel Agnostic Language for Exploration and eXplanation Overview Unverified black box model is the path to the failure. Opaqueness leads to distrust.

PyTorch implementation of UNet++ (Nested U-Net) This repository contains code for a image segmentation model based on UNet++: A Nested U-Net Architect

UNet++: A Nested U-Net Architecture for Medical Image Segmentation UNet++ is a new general purpose image segmentation architecture for more accurate i

Medical Image Segmentation with Guided Attention This repository contains the code of our paper: "'Multi-scale self-guided attention for medical image

Implementation for paper LadderNet: Multi-path networks based on U-Net for medical image segmentation This implementation is based on orobix implement

Attention Gated Networks (Image Classification & Segmentation) Pytorch implementation of attention gates used in U-Net and VGG-16 models. The framewor

Full-Resolution Residual Networks (FRRN) This repository contains code to train and qualitatively evaluate Full-Resolution Residual Networks (FRRNs) a

Multipath RefineNet A MATLAB based framework for semantic image segmentation and general dense prediction tasks on images. This is the source code for

Keras-ICNet [paper] Keras implementation of Real-Time Semantic Segmentation on High-Resolution Images. Training in progress! Requisites Python 3.6.3 K

Multi-Scale Context Aggregation by Dilated Convolutions Introduction Properties of dilated convolution are discussed in our ICLR 2016 conference paper

Keras implementation of DilatedNet for semantic segmentation A native Keras implementation of semantic segmentation according to Multi-Scale Context A

FC-DenseNet-Tensorflow This is a re-implementation of the 100 layer tiramisu, technically a fully convolutional DenseNet, in TensorFlow (Tiramisu). Th

MatConvNet implementation of the FCN models for semantic segmentation This package contains an implementation of the FCN models (training and evaluati

Train DeepLab for Semantic Image Segmentation Martin Kersner, [email protected] This repository contains scripts for training DeepLab for Semantic I

DeepLab-ResNet-TensorFlow This is an (re-)implementation of DeepLab-ResNet in TensorFlow for semantic image segmentation on the PASCAL VOC dataset. Up

DeepLab Introduction DeepLab is a state-of-art deep learning system for semantic image segmentation built on top of Caffe. It combines densely-compute

Segnet is deep fully convolutional neural network architecture for semantic pixel-wise segmentation. This is implementation of http://arxiv.org/pdf/15

Python library with Neural Networks for Image Segmentation based on Keras and TensorFlow. The main features of this library are: High level API (just

TernausNet: U-Net with VGG11 Encoder Pre-Trained on ImageNet for Image Segmentation By Vladimir Iglovikov and Alexey Shvets Introduction TernausNet is

Image Segmentation Keras : Implementation of Segnet, FCN, UNet, PSPNet and other models in Keras. Implementation of various Deep Image Segmentation mo

Tensorflow Unet Warning This project is discontinued in favour of a Tensorflow 2 compatible reimplementation of this project found under https://githu

Deep Learning Tutorial for Kaggle Ultrasound Nerve Segmentation competition, using Keras This tutorial shows how to use Keras library to build deep ne

ZF_UNET_224 Pretrained Model Modification of convolutional neural net "UNET" for image segmentation in Keras framework Requirements Python 3.*, Keras

Implementation of deep learning framework -- Unet, using Keras The architecture was inspired by U-Net: Convolutional Networks for Biomedical Image Seg

A combination of autoregressors and autoencoders using XLNet for sentiment analysis Abstract In this paper sentiment analysis has been performed in or

Sparse deconvolution Python v0.3.0 Official Python implementation of the 'Sparse deconvolution', and the CPU (NumPy) and GPU (CuPy) calculation backen

CNN Based Meta-Learning for Noisy Image Classification and Template Matching Introduction This master thesis used a few-shot meta learning approach to

The Curious Layperson: Fine-Grained Image Recognition without Expert Labels Subhabrata Choudhury, Iro Laina, Christian Rupprecht, Andrea Vedaldi Code

A criticism of a recent paper on buggy image downsampling methods in popular image processing and deep learning libraries.

TTSR Official PyTorch implementation of the paper Learning Texture Transformer Network for Image Super-Resolution accepted in CVPR 2020. Contents Intr