Python Medical-image-analysis Resources

Deskew by Marek Mauder https://galfar.vevb.net/deskew https://github.com/galfar/deskew v1.30 2019-06-07 Overview Deskew is a command line tool for des

MORAN: A Multi-Object Rectified Attention Network for Scene Text Recognition Python 2.7 Python 3.6 MORAN is a network with rectification mechanism for

Large Scale Image Completion via Co-Modulated Generative Adversarial Networks, ICLR 2021 (Spotlight) Demo | Paper [NEW!] Time to play with our interac

Diverse Structure Inpainting ArXiv | Papar | Supplementary Material | BibTex This repository is for the CVPR 2021 paper, "Generating Diverse Structure

BIGPrior: Towards Decoupling Learned Prior Hallucination and Data Fidelity in Image Restoration Authors: Majed El Helou, and Sabine Süsstrunk {Note: p

Kalman Filter in Python This is a basic example of how Kalman filter works in Python. I do plan on refactoring and expanding this repo in the future.

Negative Sampling for NER Unlabeled entity problem is prevalent in many NER scenarios (e.g., weakly supervised NER). Our paper in ICLR-2021 proposes u

IIM - Crowd Localization This repo is the official implementation of paper: Learning Independent Instance Maps for Crowd Localization. The code is dev

TTNet-Pytorch The implementation for the paper "TTNet: Real-time temporal and spatial video analysis of table tennis" An introduction of the project c

SMSR Reposity for "Exploring Sparsity in Image Super-Resolution for Efficient Inference" [arXiv] Highlights Locate and skip redundant computation in S

Implementation / replication of DALL-E, OpenAI's Text to Image Transformer, in Pytorch

Implementation of Analyzing and Improving the Image Quality of StyleGAN (StyleGAN 2) in PyTorch

Bringing Old Photo Back to Life (CVPR 2020 oral)

Simple command line tool for text to image generation using OpenAI's CLIP and Siren (Implicit neural representation network)

SpiderFoot is an open source intelligence (OSINT) automation tool. It integrates with just about every data source available and utilises a range of m

Cowrie Welcome to the Cowrie GitHub repository This is the official repository for the Cowrie SSH and Telnet Honeypot effort. What is Cowrie Cowrie is

Solaris Image Packaging System Introduction The image packaging system (IPS) is a software delivery system with interaction with a network repository

Trafalgar Python library to make development of portfolio analysis faster and easier Installation 🔥 For the moment, Trafalgar is still in beta develo

CoTr: Efficient 3D Medical Image Segmentation by bridging CNN and Transformer This is the official pytorch implementation of the CoTr: Paper: CoTr: Ef

QPIC: Query-Based Pairwise Human-Object Interaction Detection with Image-Wide Contextual Information by Masato Tamura, Hiroki Ohashi, and Tomoaki Yosh

involution Official implementation of a neural operator as described in Involution: Inverting the Inherence of Convolution for Visual Recognition (CVP

Anycost GAN video | paper | website Anycost GANs for Interactive Image Synthesis and Editing Ji Lin, Richard Zhang, Frieder Ganz, Song Han, Jun-Yan Zh

sentello Sentello is a python script that simulates the anti-evasion and anti-analysis techniques used by malware. For techniques that are difficult t

Aphantasia This is a text-to-image tool, part of the artwork of the same name. Based on CLIP model, with FFT parameterizer from Lucent library as a ge

Easy Few-Shot Learning Ready-to-use code and tutorial notebooks to boost your way into few-shot image classification. This repository is made for you

Morph-UGATIT a morph transfer UGATIT for image translation. Introduction 中文技术文档 This is Pytorch implementation of UGATIT, paper "U-GAT-IT: Unsupervise

Alphalens Alphalens is a Python Library for performance analysis of predictive (alpha) stock factors. Alphalens works great with the Zipline open sour

scikit-posthocs is a Python package that provides post hoc tests for pairwise multiple comparisons that are usually performed in statistical data anal

Pandas Profiling Documentation | Slack | Stack Overflow Generates profile reports from a pandas DataFrame. The pandas df.describe() function is great

pandas_summary An extension to pandas dataframes describe function. The module contains DataFrameSummary object that extend describe() with: propertie

Albumentations Albumentations is a Python library for image augmentation. Image augmentation is used in deep learning and computer vision tasks to inc

Augmentor is an image augmentation library in Python for machine learning. It aims to be a standalone library that is platform and framework independe

imgaug This python library helps you with augmenting images for your machine learning projects. It converts a set of input images into a new, much lar

scikit-image: Image processing in Python Website (including documentation): https://scikit-image.org/ Mailing list: https://mail.python.org/mailman3/l

OpenCV: Open Source Computer Vision Library Resources Homepage: https://opencv.org Courses: https://opencv.org/courses Docs: https://docs.opencv.org/m

madmom Madmom is an audio signal processing library written in Python with a strong focus on music information retrieval (MIR) tasks. The library is i

Welcome to MARSYAS. MARSYAS is a software framework for rapid prototyping of audio applications, with flexibility and extensibility as primary concer

Essentia Essentia is an open-source C++ library for audio analysis and audio-based music information retrieval released under the Affero GPL license.

aubio aubio is a library to label music and sounds. It listens to audio signals and attempts to detect events. For instance, when a drum is hit, at wh

POT: Python Optimal Transport This open source Python library provide several solvers for optimization problems related to Optimal Transport for signa

emcee The Python ensemble sampling toolkit for affine-invariant MCMC emcee is a stable, well tested Python implementation of the affine-invariant ense

dovpanda Directions OVer PANDAs Directions are hints and tips for using pandas in an analysis environment. dovpanda is an overlay companion for workin

datatable This is a Python package for manipulating 2-dimensional tabular data structures (aka data frames). It is close in spirit to pandas or SFrame

XPandas (extended Pandas) implements 1D and 2D data containers for storing type-heterogeneous tabular data of any type, and encapsulates feature extra

Pandas Profiling Documentation | Slack | Stack Overflow Generates profile reports from a pandas DataFrame. The pandas df.describe() function is great

TensorFlow Model Analysis TensorFlow Model Analysis (TFMA) is a library for evaluating TensorFlow models. It allows users to evaluate their models on

Yellowbrick Visual analysis and diagnostic tools to facilitate machine learning model selection. What is Yellowbrick? Yellowbrick is a suite of visual

Gluon CV Toolkit | Installation | Documentation | Tutorials | GluonCV provides implementations of the state-of-the-art (SOTA) deep learning models in

imbalanced-learn imbalanced-learn is a python package offering a number of re-sampling techniques commonly used in datasets showing strong between-cla

Time series analysis today is an important cornerstone of quantitative science in many disciplines, including natural and life sciences as well as eco

tslearn The machine learning toolkit for time series analysis in Python Section Description Installation Installing the dependencies and tslearn Getti

[Due to the time taken @ uni, work + hell breaking loose in my life, since things have calmed down a bit, will continue commiting!!!] [By the way, I'm

Mlxtend (machine learning extensions) is a Python library of useful tools for the day-to-day data science tasks. Sebastian Raschka 2014-2021 Links Doc

dlib C++ library Dlib is a modern C++ toolkit containing machine learning algorithms and tools for creating complex software in C++ to solve real worl

What is xLearn? xLearn is a high performance, easy-to-use, and scalable machine learning package that contains linear model (LR), factorization machin

PENet: Precise and Efficient Depth Completion This repo is the PyTorch implementation of our paper to appear in ICRA2021 on "Towards Precise and Effic

CVE-2021-23132 com_media allowed paths that are not intended for image uploads to RCE. CVE-2020-24597 Directory traversal in com_media to RCE Two CVEs

invisible-watermark invisible-watermark is a python library and command line tool for creating invisible watermark over image.(aka. blink image waterm

Deep Illuminator Deep Illuminator is a data augmentation tool designed for image relighting. It can be used to easily and efficiently genera

GANsformer: Generative Adversarial Transformers Drew A. Hudson* & C. Lawrence Zitnick *I wish to thank Christopher D. Manning for the fruitf

Transformer in Transformer Implementation of Transformer in Transformer, pixel level attention paired with patch level attention for image c

Demo Code for "Talking Head Anime from a Single Image 2: More Expressive" This repository contains demo programs for the Talking Head Anime

HiSD: Image-to-image Translation via Hierarchical Style Disentanglement Official pytorch implementation of paper "Image-to-image Translation

Image Editor - An open source image editor which can manipulate an image in many ways! If you need any more modes in repo or I

Orange Data Mining Orange is a data mining and visualization toolbox for novice and expert alike. To explore data with Orange, one requires no program

Table of contents What is PEM? Overview Installation Usage Executable Library Telegram Bot Try OPEM in Your Browser! MATLAB Issues & Bug Reports Contr

MOSAIC: A modular single-molecule analysis interface MOSAIC is a single molecule analysis toolbox that automatically decodes multi-state nanopore data

InVesalius InVesalius generates 3D medical imaging reconstructions based on a sequence of 2D DICOM files acquired with CT or MRI equipments. InVesaliu

CellProfiler is a free open-source software designed to enable biologists without training in computer vision or programming to quantitatively measure

StudioGAN is a Pytorch library providing implementations of representative Generative Adversarial Networks (GANs) for conditional/unconditional image generation.

The open-source core of Pinry, a tiling image board system for people who want to save, tag, and share images, videos and webpages in an easy to skim

Friture Friture is an application to visualize and analyze live audio data in real-time. Friture displays audio data in several widgets, such as a sco

CIPS -- Official Pytorch Implementation of the paper Image Generators with Conditionally-Independent Pixel Synthesis Requirements pip install -r requi

Easy to setup customizable honeypots for monitoring network traffic, bots activities and username\password credentials. The current available honeypot

Medical-Transformer Pytorch Code for the paper "Medical Transformer: Gated Axial-Attention for Medical Image Segmentation" About this repo: This repo

Quru Image Server - dynamic imaging for web and print QIS is a high performance web server for creating and delivering dynamic images. It is ideal for

Photonix Photo Manager This is a photo management application based on web technologies. Run it on your home server and it will let you find what you

ocropy OCRopus is a collection of document analysis programs, not a turn-key OCR system. In order to apply it to your documents, you may need to do so

Meshroom is a free, open-source 3D Reconstruction Software based on the AliceVision Photogrammetric Computer Vision framework. Learn more details abou

a BTC Clipper or a "Bitcoin Clipper" is a type of malware designed to target cryptocurrency transactions.

TransUNet This repo holds code for TransUNet: Transformers Make Strong Encoders for Medical Image Segmentation Usage

Official PyTorch code for ClipBERT, an efficient framework for end-to-end learning on image-text and video-text tasks. It takes raw videos/images + text as inputs, and outputs task predictions. ClipBERT is designed based on 2D CNNs and transformers, and uses a sparse sampling strategy to enable efficient end-to-end video-and-language learning.

Hide secret texts/messages inside an image. You can optionally encrypt your texts with a password using AES-256 before encoding into the image.

BaseSpec is a system that performs a comparative analysis of baseband implementation and the specifications of cellular networks. The key intuition of BaseSpec is that a message decoder in baseband software embeds the protocol specification in a machine-friendly structure to parse incoming messages;

SeaLion is designed to teach today's aspiring ml-engineers the popular machine learning concepts of today in a way that gives both intuition and ways of application. We do this through concise algorithms that do the job in the least jargon possible and examples to guide you through every step of the way.

HyperTag HyperTag helps humans intuitively express how they think about their files using tags and machine learning.

xgbse: XGBoost Survival Embeddings "There are two cultures in the use of statistical modeling to reach conclusions from data

CANalyse is a tool built to analyze the log files to find out unique datasets automatically and able to connect to simple user interfaces suc

一键翻译各类图片内文字 针对群内、各个图站上大量不太可能会有人去翻译的图片设计，让我这种日语小白能够勉强看懂图片 主要支持日语，不过也能识别汉语和小写英文 支持简单的涂白和嵌字

HyperTag helps humans intuitively express how they think about their files using tags and machine learning. Represent how you think using tags. Find what you look for using semantic search for your text documents (yes, even PDF's) and images.

Supported tags and respective Dockerfile links python3.8, latest (Dockerfile) python3.7, (Dockerfile) python3.6 (Dockerfile) python3.8-slim (Dockerfil

The HyperNetX library provides classes and methods for the analysis and visualization of complex network data. HyperNetX uses data structures designed to represent set systems containing nested data and/or multi-way relationships. The library generalizes traditional graph metrics to hypergraphs.

Summarization, translation, Q&A, text generation and more at blazing speed using a T5 version implemented in ONNX. This package is still in alpha stag

WHAT: Supervised text vectorization tool Textvec is a text vectorization tool, with the aim to implement all the "classic" text vectorization NLP meth

VizSeq is a Python toolkit for visual analysis on text generation tasks like machine translation, summarization, image captioning, speech translation

textpipe: clean and extract metadata from text textpipe is a Python package for converting raw text in to clean, readable text and extracting metadata

Scattertext 0.1.0.0 A tool for finding distinguishing terms in corpora and displaying them in an interactive HTML scatter plot. Points corresponding t

Spark NLP: State of the Art Natural Language Processing Spark NLP is a Natural Language Processing library built on top of Apache Spark ML. It provide

VADER-Sentiment-Analysis VADER (Valence Aware Dictionary and sEntiment Reasoner) is a lexicon and rule-based sentiment analysis tool that is specifica

An easier way to build neural search on the cloud Jina is a deep learning-powered search framework for building cross-/multi-modal search systems (e.g