Python Mri-reconstruction Resources

SkeletonNet This repository constains the codes and ShapeNetV1-Surface-Skeleton,ShapNetV1-SkeletalVolume and 2d image datasets ShapeNetRendering. Plea

DynaBOA Code repositoty for the paper: Out-of-Domain Human Mesh Reconstruction via Dynamic Bilevel Online Adaptation Shanyan Guan, Jingwei Xu, Michell

Shape As Points (SAP) Paper | Project Page | Short Video (6 min) | Long Video (12 min) This repository contains the implementation of the paper: Shape

Code for Neural Reflectance Surfaces (NeRS) [arXiv] [Project Page] [Colab Demo] [Bibtex] This repo contains the code for NeRS: Neural Reflectance Surf

meddlr Getting Started Meddlr is a config-driven ML framework built to simplify medical image reconstruction and analysis problems. Installation To av

DynaBOA Code repositoty for the paper: Out-of-Domain Human Mesh Reconstruction via Dynamic Bilevel Online Adaptation Shanyan Guan, Jingwei Xu, Michell

CBMPy Metadraft: a flexible and extensible, GUI-based genome-scale model reconstruction tool that supports multiple Systems Biology standards.

RGDSVR Tools for Robust Generative Diffeomorphic Slice to Volume Reconstructions (RGDSVR) This repository provides tools to implement the methods in t

ROSEFusion 🌹 This project is based on our SIGGRAPH 2021 paper, ROSEFusion: Random Optimization for Online DenSE Reconstruction under Fast Camera Moti

Non-Imaging Transient Reconstruction And TEmporal Search (NITRATES) This repo contains the full NITRATES pipeline for maximum likelihood-driven discov

Interacting Two-Hand 3D Pose and Shape Reconstruction from Single Color Image Interacting Two-Hand 3D Pose and Shape Reconstruction from Single Color

DreamerPro Official implementation of DreamerPro: Reconstruction-Free Model-Based Reinforcement Learning with Prototypical Representations in TensorFl

Back to Event Basics: SSL of Image Reconstruction for Event Cameras Minimal code for Back to Event Basics: Self-Supervised Learning of Image Reconstru

AA-RMVSNet Code for AA-RMVSNet: Adaptive Aggregation Recurrent Multi-view Stereo Network (ICCV 2021) in PyTorch. paper link: arXiv | CVF Change Log Ju

WARPd Code for the Weighted, Accelerated and Restarted Primal-dual algorithm. This algorithm achieves stable linear convergence for reconstruction fro

Hierarchical probabilistic 3D U-Net, with attention mechanisms (—𝘈𝘵𝘵𝘦𝘯𝘵𝘪𝘰𝘯 𝘜-𝘕𝘦𝘵, 𝘚𝘌𝘙𝘦𝘴𝘕𝘦𝘵) and a nested decoder structure with deep supervision (—𝘜𝘕𝘦𝘵++). Built in TensorFlow 2.5. Configured for voxel-level clinically significant prostate cancer detection in multi-channel 3D bpMRI scans.

Unsupervised Depth Completion with Calibrated Backprojection Layers PyTorch implementation of Unsupervised Depth Completion with Calibrated Backprojec

picinpics Script that receives an Image (original) and a set of images to be used as "pixels" in reconstruction of the Original image using the set of

PyTorch Implementation of Unsupervised Depth Completion with Calibrated Backprojection Layers (ORAL, ICCV 2021)

In-the-Wild Single Camera 3D Reconstruction Through Moving Water Surfaces This is the PyTorch implementation for 2021 ICCV paper "In-the-Wild Single C

Occlusion Robust 3D face Reconstruction Yeong-Joon Ju, Gun-Hee Lee, Jung-Ho Hong, and Seong-Whan Lee Code for Occlusion Robust 3D Face Reconstruction

VAE animeface Variational autoencoder for anime face reconstruction Introduction This repository is an exploratory example to train a variational auto

Role-based network embedding via structural features reconstruction with degree-regularized constraint Train python main.py --dataset brazil-flights

Color & Depth Renderer for ShapeNet This library includes the tools for rendering multi-view color and depth images of ShapeNet models. Physically bas

DBSegment This tool generates 30 deep brain structures segmentation, as well as a brain mask from T1-Weighted MRI. The whole procedure should take ~1

KCT CBCT Fast, accurate and reliable software for algebraic CT reconstruction. This set of software tools includes OpenCL implementation of modern CT

HF2-VAD Offcial implementation of "A Hybrid Video Anomaly Detection Framework via Memory-Augmented Flow Reconstruction and Flow-Guided Frame Predictio

QSIprep: Preprocessing and analysis of q-space images Full documentation at https://qsiprep.readthedocs.io About qsiprep configures pipelines for proc

Focal Frequency Loss - Official PyTorch Implementation This repository provides the official PyTorch implementation for the following paper: Focal Fre

crfill Usage | Web App | | Paper | Supplementary Material | More results | code for paper ``CR-Fill: Generative Image Inpainting with Auxiliary Contex

Documentation The documentation is available on populse_mia's website here Installation From PyPI, for users By cloning the package, for developers Fr

Traffic4D: Single View Reconstruction of Repetitious Activity Using Longitudinal Self-Supervision Project | PDF | Poster Fangyu Li, N. Dinesh Reddy, X

Towards Accurate Alignment in Real-time 3D Hand-Mesh Reconstruction Introduction This is official PyTorch implementation of Towards Accurate Alignment

PARE: Part Attention Regressor for 3D Human Body Estimation [ICCV 2021] PARE: Part Attention Regressor for 3D Human Body Estimation, Muhammed Kocabas,

SPEC: Seeing People in the Wild with an Estimated Camera [ICCV 2021] SPEC: Seeing People in the Wild with an Estimated Camera, Muhammed Kocabas, Chun-

UNISURF: Unifying Neural Implicit Surfaces and Radiance Fields for Multi-View Reconstruction Project Page | Paper | Supplementary | Video This reposit

Interactive Scene Reconstruction Project Page | Paper This repository contains the implementation of our ICRA2021 paper Reconstructing Interactive 3D

RetrievalFuse Paper | Project Page | Video RetrievalFuse: Neural 3D Scene Reconstruction with a Database Yawar Siddiqui, Justus Thies, Fangchang Ma, Q

Differentiable Volumetric Rendering Paper | Supplementary | Spotlight Video | Blog Entry | Presentation | Interactive Slides | Project Page This repos

Multiview Neural Surface Reconstruction by Disentangling Geometry and Appearance Project Page | Paper | Data This repository contains an implementatio

Small Lesion Segmentation in Brain MRIs with Subpixel Embedding PyTorch implementation of Small Lesion Segmentation in Brain MRIs with Subpixel Embedd

Table of Content Introduction Getting Started Datasets Installation Experiments Training & Testing Pretrained models Texture fine-tuning Demo Toward R

TreePartNet This is the code repository implementing the paper "TreePartNet: Neural Decomposition of Point Clouds for 3D Tree Reconstruction". Depende

patchmatch patchmatch以及patchmatchstereo算法的python版实现 patchmatch参考 github patchmatchstereo参考李迎松博士的c++版代码 由于patchmatchstereo没有做任何优化，并且是python的代码，主要是方便解析算

bartpy Python bindings for BART. Overview This repo contains code to generate an updated Python wrapper for the Berkeley Advance Reconstruction Toolbo

Planar Surface Reconstruction From Sparse Views Linyi Jin, Shengyi Qian, Andrew Owens, David F. Fouhey University of Michigan ICCV 2021 (Oral) This re

HV-plane reconstruction from a single 360 image Code for our paper in CVPR 2021: Indoor Panorama Planar 3D Reconstruction via Divide and Conquer (pape

Multi-view 3D reconstruction using neural rendering. Unofficial implementation of UNISURF, VolSDF, NeuS and more.

NerfingMVS Project Page | Paper | Video | Data NerfingMVS: Guided Optimization of Neural Radiance Fields for Indoor Multi-view Stereo Yi Wei, Shaohui

(ACMMM 2021 Oral) SfM Face Reconstruction Based on Massive Landmark Bundle Adjustment This repository shows two tasks: Face landmark detection and Fac

Sign-Agnostic Convolutional Occupancy Networks Paper | Supplementary | Video | Teaser Video | Project Page This repository contains the implementation

Sign-Agnostic Convolutional Occupancy Networks Paper | Supplementary | Video | Teaser Video | Project Page This repository contains the implementation

(ACMMM 2021 Oral) SfM Face Reconstruction Based on Massive Landmark Bundle Adjustment This repository shows two tasks: Face landmark detection and Fac

SADRNet Paper link: SADRNet: Self-Aligned Dual Face Regression Networks for Robust 3D Dense Face Alignment and Reconstruction Requirements python

Towards uncontrained hand-object reconstruction from RGB videos Yana Hasson, Gül Varol, Ivan Laptev and Cordelia Schmid Project page Paper Table of Co

Code for HDR Video Reconstruction HDR Video Reconstruction: A Coarse-to-fine Network and A Real-world Benchmark Dataset (ICCV 2021) Guanying Chen, Cha

An Effective Loss Function for Generating 3D Models from Single 2D Image without Rendering Papers with code | Paper Nikola Zubić Pietro Lio University

H3DS Dataset This repository contains the code for using the H3DS dataset introduced in H3D-Net: Few-Shot High-Fidelity 3D Head Reconstruction Access

PyTorch Deep Image Prior An implementation of image reconstruction methods from Deep Image Prior (Ulyanov et al., 2017) in PyTorch. The point of the p

Neural Implicit Reconstruction with Vector Neurons This repository contains code for the neural implicit reconstruction experiments in the paper Vecto

Riggable 3D Face Reconstruction via In-Network Optimization Source code for CVPR 2021 paper "Riggable 3D Face Reconstruction via In-Network Optimizati

Accurate 3D Face Reconstruction with Weakly-Supervised Learning: From Single Image to Image Set —— PyTorch implementation This is an unofficial offici

densebody_pytorch PyTorch implementation of CloudWalk's recent paper DenseBody. Note: For most recent updates, please check out the dev branch. Update

MonoRUn MonoRUn: Monocular 3D Object Detection by Reconstruction and Uncertainty Propagation. CVPR 2021. [paper] Hansheng Chen, Yuyao Huang, Wei Tian*

ManhattanSLAM Authors: Raza Yunus, Yanyan Li and Federico Tombari ManhattanSLAM is a real-time SLAM library for RGB-D cameras that computes the camera

U-Net for brain segmentation U-Net implementation in PyTorch for FLAIR abnormality segmentation in brain MRI based on a deep learning segmentation alg

RootBA: Square Root Bundle Adjustment Project Page | Paper | Poster | Video | Code Table of Contents Citation Dependencies Installing dependencies on

Who Left the Dogs Out? Evaluation and demo code for our ECCV 2020 paper: Who Left the Dogs Out? 3D Animal Reconstruction with Expectation Maximization

S2HAND: Model-based 3D Hand Reconstruction via Self-Supervised Learning S2HAND presents a self-supervised 3D hand reconstruction network that can join

NoW Evaluation This is the official repository for evaluation on the NoW Benchmark Dataset. The goal of the NoW benchmark is to introduce a standard e

LASR Installation Build with conda conda env create -f lasr.yml conda activate lasr # install softras cd third_party/softras; python setup.py install;

Neural Deformation Graphs Project Page | Paper | Video Neural Deformation Graphs for Globally-consistent Non-rigid Reconstruction Aljaž Božič, Pablo P

MonoRec: Semi-Supervised Dense Reconstruction in Dynamic Environments from a Single Moving Camera

SinIR (Official Implementation) Requirements To install requirements: pip install -r requirements.txt We used Python 3.7.4 and f-strings which are in

MeshTransformer ✨ This is our research code of End-to-End Human Pose and Mesh Reconstruction with Transformers. MEsh TRansfOrmer is a simple yet effec

TSDF++: A Multi-Object Formulation for Dynamic Object Tracking and Reconstruction TSDF++ is a novel multi-object TSDF formulation that can encode mult

Reducing Footskate in Human Motion Reconstruction with Ground Contact Constraints Official implementation for Reducing Footskate in Human Motion Recon

The Boombox: Visual Reconstruction from Acoustic Vibrations Boyuan Chen, Mia Chiquier, Hod Lipson, Carl Vondrick Columbia University Project Website |

StyleGAR TODO: add arxiv link Implementation of Inverting Generative Adversarial Renderer for Face Reconstruction TODO: for test Currently, some model

fastMRI is a collaborative research project from Facebook AI Research (FAIR) and NYU Langone Health to investigate the use of AI to make MRI scans faster. NYU Langone Health has released fully anonymized knee and brain MRI datasets that can be downloaded from the fastMRI dataset page. Publications associated with the fastMRI project can be found at the end of this README.

PeeledHuman: Robust Shape Representation for Textured 3D Human Body Reconstruction International Conference on 3D Vision, 2020 Sai Sagar Jinka1, Rohan

Bayesian Image Reconstruction using Deep Generative Models R. Marinescu, D. Moyer, P. Golland For technical inquiries, please create a Github issue. F

Deep learning networks This repo is used to research convolutional networks primarily for computer vision tasks. For this purpose, the repo contains (

Surface Reconstruction from 3D Line Segments Surface reconstruction from 3d line segments. Langlois, P. A., Boulch, A., & Marlet, R. In 2019 Internati

Synergies Between Affordance and Geometry: 6-DoF Grasp Detection via Implicit Representations Zhenyu Jiang, Yifeng Zhu, Maxwell Svetlik, Kuan Fang, Yu

RfD-Net [Project Page] [Paper] [Video] RfD-Net: Point Scene Understanding by Semantic Instance Reconstruction Yinyu Nie, Ji Hou, Xiaoguang Han, Matthi

CoReNet CoReNet is a technique for joint multi-object 3D reconstruction from a single RGB image. It produces coherent reconstructions, where all objec

NeuralRecon: Real-Time Coherent 3D Reconstruction from Monocular Video Project Page | Paper NeuralRecon: Real-Time Coherent 3D Reconstruction from Mon

PyMAF This repository contains the code for the following paper: 3D Human Pose and Shape Regression with Pyramidal Mesh Alignment Feedback Loop Hongwe

Poisson Surface Reconstruction for LiDAR Odometry and Mapping Surfels TSDF Our Approach Table: Qualitative comparison between the different mapping te

DeepMLS: Deep Implicit Moving Least-Squares Functions for 3D Reconstruction This repository contains the implementation of the paper: Deep Implicit Mo

Learning Pairwise Inter-Plane Relations for Piecewise Planar Reconstruction Code for the ECCV 2020 paper by Yiming Qian and Yasutaka Furukawa Getting

InVesalius InVesalius generates 3D medical imaging reconstructions based on a sequence of 2D DICOM files acquired with CT or MRI equipments. InVesaliu

Meshroom is a free, open-source 3D Reconstruction Software based on the AliceVision Photogrammetric Computer Vision framework. Learn more details abou

Non-Rigid Neural Radiance Fields This is the official repository for the project "Non-Rigid Neural Radiance Fields: Reconstruction and Novel View Synt

AIST++ API This repo contains starter code for using the AIST++ dataset. To download the dataset or explore details of this dataset, please go to our

Stable Head Pose Estimation and Landmark Regression via 3D Dense Face Reconstruction Reimplementation of (ECCV 2020) Towards Fast, Accurate and Stable

Documentation: https://raamana.github.io/neuropredict/ News As of v0.6, neuropredict now supports regression applications i.e. predicting continuous t

nilearn Nilearn enables approachable and versatile analyses of brain volumes. It provides statistical and machine-learning tools, with instructive doc