175 Repositories
Python relational-graphs Libraries
ipyvizzu - Jupyter notebook integration of Vizzu
ipyvizzu - Jupyter notebook integration of Vizzu. Tutorial · Examples · Repository About The Project ipyvizzu is the Jupyter Notebook integration of V
Semantic Data Management - Property Graphs 📈
SDM - Lab 1 @ UPC 👨🏻💻 Table of contents Introduction Property Graph Dataset 1. Introduction This repo is all about what we have done in SDM lab 1
ReLoss - Official implementation for paper "Relational Surrogate Loss Learning" ICLR 2022
Relational Surrogate Loss Learning (ReLoss) Official implementation for paper "R
Neighbor2Seq: Deep Learning on Massive Graphs by Transforming Neighbors to Sequences
Neighbor2Seq: Deep Learning on Massive Graphs by Transforming Neighbors to Sequences This repository is an official PyTorch implementation of Neighbor
Kglab - an abstraction layer in Python for building knowledge graphs
Graph Data Science: an abstraction layer in Python for building knowledge graphs, integrated with popular graph libraries – atop Pandas, RDFlib, pySHACL, RAPIDS, NetworkX, iGraph, PyVis, pslpython, pyarrow, etc.
Loopy belief propagation for factor graphs on discrete variables, in JAX!
PGMax implements general factor graphs for discrete probabilistic graphical models (PGMs), and hardware-accelerated differentiable loopy belief propagation (LBP) in JAX.
Tracks how much money a profile has in their bank and graphs it, as long as they enable the bank api
Tracks how much money a profile has in their bank and graphs it, as long as they enable the bank api. (you could really use this to track anything from the hypixel api)
1900-2016 Olympic Data Analysis in Python by plotting different graphs
🔥 Olympics Data Analysis 🔥 In Data Science field, there is a big topic before creating a model for future prediction is Data Analysis. We can find o
Mapomatic - Automatic mapping of compiled circuits to low-noise sub-graphs
mapomatic Automatic mapping of compiled circuits to low-noise sub-graphs Overvie
Hatchet is a Python-based library that allows Pandas dataframes to be indexed by structured tree and graph data.
Hatchet Hatchet is a Python-based library that allows Pandas dataframes to be indexed by structured tree and graph data. It is intended for analyzing
My solutions for Stanford University course CS224W: Machine Learning with Graphs Fall 2021 colabs (GNN, GAT, GraphSAGE, GCN)
machine-learning-with-graphs My solutions for Stanford University course CS224W: Machine Learning with Graphs Fall 2021 colabs Course materials can be
Tracking Progress in Question Answering over Knowledge Graphs
Tracking Progress in Question Answering over Knowledge Graphs Table of contents Question Answering Systems with Descriptions The QA Systems Table cont
Bootstrapped Representation Learning on Graphs
Bootstrapped Representation Learning on Graphs This is the PyTorch implementation of BGRL Bootstrapped Representation Learning on Graphs The main scri
STonKGs is a Sophisticated Transformer that can be jointly trained on biomedical text and knowledge graphs
STonKGs STonKGs is a Sophisticated Transformer that can be jointly trained on biomedical text and knowledge graphs. This multimodal Transformer combin
A library for creating text-based graphs in the terminal
tplot is a Python package for creating text-based graphs. Useful for visualizing data to the terminal or log files.
Code for ICCV 2021 paper Graph-to-3D: End-to-End Generation and Manipulation of 3D Scenes using Scene Graphs
Graph-to-3D This is the official implementation of the paper Graph-to-3d: End-to-End Generation and Manipulation of 3D Scenes Using Scene Graphs | arx
Just a simple python script to generate graphs of salt state requisites.
saltstatevis Just a simple python script to generate graphs of salt state requisites. Installation Requirements You will need to install graphviz to r
A Graph Neural Network Tool for Recovering Dense Sub-graphs in Random Dense Graphs.
PYGON A Graph Neural Network Tool for Recovering Dense Sub-graphs in Random Dense Graphs. Installation This code requires to install and run the graph
Plotting points that lie on the intersection of the given curves using gradient descent.
Plotting intersection of curves using gradient descent Webapp Link --- What's the app about Why this app Plotting functions and their intersection. A
GAT - Graph Attention Network (PyTorch) 💻 + graphs + 📣 = ❤️
GAT - Graph Attention Network (PyTorch) 💻 + graphs + 📣 = ❤️ This repo contains a PyTorch implementation of the original GAT paper ( 🔗 Veličković et
This repository is for our paper Exploiting Scene Graphs for Human-Object Interaction Detection accepted by ICCV 2021.
SG2HOI This repository is for our paper Exploiting Scene Graphs for Human-Object Interaction Detection accepted by ICCV 2021. Installation Pytorch 1.7
Code accompanying the paper Say As You Wish: Fine-grained Control of Image Caption Generation with Abstract Scene Graphs (Chen et al., CVPR 2020, Oral).
Say As You Wish: Fine-grained Control of Image Caption Generation with Abstract Scene Graphs This repository contains PyTorch implementation of our pa
Glyph-graph - A simple, yet versatile, package for graphing equations on a 2-dimensional text canvas
Glyth Graph Revision for 0.01 A simple, yet versatile, package for graphing equations on a 2-dimensional text canvas List of contents: Brief Introduct
Organseg dags - The repository contains the codebase for multi-organ segmentation with directed acyclic graphs (DAGs) in CT.
Organseg dags - The repository contains the codebase for multi-organ segmentation with directed acyclic graphs (DAGs) in CT.
The Python SQL Toolkit and Object Relational Mapper
SQLAlchemy The Python SQL Toolkit and Object Relational Mapper Introduction SQLAlchemy is the Python SQL toolkit and Object Relational Mapper that giv
Apriori - An algorithm for frequent item set mining and association rule learning over relational databases
Apriori Apriori is an algorithm for frequent item set mining and association rul
Generalized Matrix Means for Semi-Supervised Learning with Multilayer Graphs
Generalized Matrix Means for Semi-Supervised Learning with Multilayer Graphs MATLAB implementation of the paper: P. Mercado, F. Tudisco, and M. Hein,
Contrastive Multi-View Representation Learning on Graphs
Contrastive Multi-View Representation Learning on Graphs This work introduces a self-supervised approach based on contrastive multi-view learning to l
A simple interpreted language for creating basic mathematical graphs.
graphr Introduction graphr is a small language written to create basic mathematical graphs. It is an interpreted language written in python and essent
Implementation of paper "Self-supervised Learning on Graphs:Deep Insights and New Directions"
SelfTask-GNN A PyTorch implementation of "Self-supervised Learning on Graphs: Deep Insights and New Directions". [paper] In this paper, we first deepe
Official PyTorch Implementation of "Self-supervised Auxiliary Learning with Meta-paths for Heterogeneous Graphs". NeurIPS 2020.
Self-supervised Auxiliary Learning with Meta-paths for Heterogeneous Graphs This repository is the implementation of SELAR. Dasol Hwang* , Jinyoung Pa
Reference Code for AAAI-20 paper "Multi-Stage Self-Supervised Learning for Graph Convolutional Networks on Graphs with Few Labels"
Reference Code for AAAI-20 paper "Multi-Stage Self-Supervised Learning for Graph Convolutional Networks on Graphs with Few Labels" Please refer to htt
Official PyTorch implementation of the paper "Self-Supervised Relational Reasoning for Representation Learning", NeurIPS 2020 Spotlight.
Official PyTorch implementation of the paper: "Self-Supervised Relational Reasoning for Representation Learning" (2020), Patacchiola, M., and Storkey,
Mycodo is open source software for the Raspberry Pi that couples inputs and outputs in interesting ways to sense and manipulate the environment.
Mycodo Environmental Regulation System Latest version: 8.12.9 Mycodo is open source software for the Raspberry Pi that couples inputs and outputs in i
Profile and test to gain insights into the performance of your beautiful Python code
Profile and test to gain insights into the performance of your beautiful Python code View Demo - Report Bug - Request Feature QuickPotato in a nutshel
FCurve-Cleaner: Tries to clean your dense mocap graphs like an animator would
Tries to clean your dense mocap graphs like an animator would! So it will produce a usable artist friendly result while maintaining the original graph.
Object-data mapper and advanced query manager for non relational databases
Object data mapper and advanced query manager for non relational databases. The data is owned by different, configurable back-end databases and it is
LynxKite: a complete graph data science platform for very large graphs and other datasets.
LynxKite is a complete graph data science platform for very large graphs and other datasets. It seamlessly combines the benefits of a friendly graphical interface and a powerful Python API.
Multi-task Learning of Order-Consistent Causal Graphs (NeuRIPs 2021)
Multi-task Learning of Order-Consistent Causal Graphs (NeuRIPs 2021) Authors: Xinshi Chen, Haoran Sun, Caleb Ellington, Eric Xing, Le Song Link to pap
Edge-Augmented Graph Transformer
Edge-augmented Graph Transformer Introduction This is the official implementation of the Edge-augmented Graph Transformer (EGT) as described in https:
Hierarchical Clustering: O(1)-Approximation for Well-Clustered Graphs
Hierarchical Clustering: O(1)-Approximation for Well-Clustered Graphs This repository contains code to accompany the paper "Hierarchical Clustering: O
[ICME 2021 Oral] CORE-Text: Improving Scene Text Detection with Contrastive Relational Reasoning
CORE-Text: Improving Scene Text Detection with Contrastive Relational Reasoning This repository is the official PyTorch implementation of CORE-Text, a
Codes for AAAI 2022 paper: Context-aware Health Event Prediction via Transition Functions on Dynamic Disease Graphs
Context-Aware-Healthcare Codes for AAAI 2022 paper: Context-aware Health Event Prediction via Transition Functions on Dynamic Disease Graphs Download
Records is a very simple, but powerful, library for making raw SQL queries to most relational databases.
Records: SQL for Humans™ Records is a very simple, but powerful, library for making raw SQL queries to most relational databases. Just write SQL. No b
Synthetic Data Generation for tabular, relational and time series data.
An Open Source Project from the Data to AI Lab, at MIT Website: https://sdv.dev Documentation: https://sdv.dev/SDV User Guides Developer Guides Github
WSDM2022 "A Simple but Effective Bidirectional Extraction Framework for Relational Triple Extraction"
BiRTE WSDM2022 "A Simple but Effective Bidirectional Extraction Framework for Relational Triple Extraction" Requirements The main requirements are: py
Rapid experimentation and scaling of deep learning models on molecular and crystal graphs.
LitMatter A template for rapid experimentation and scaling deep learning models on molecular and crystal graphs. How to use Clone this repository and
Official Pytorch Implementation of Relational Self-Attention: What's Missing in Attention for Video Understanding
Relational Self-Attention: What's Missing in Attention for Video Understanding This repository is the official implementation of "Relational Self-Atte
An official source code for "Augmentation-Free Self-Supervised Learning on Graphs"
Augmentation-Free Self-Supervised Learning on Graphs An official source code for Augmentation-Free Self-Supervised Learning on Graphs paper, accepted
An official source code for "Augmentation-Free Self-Supervised Learning on Graphs"
Augmentation-Free Self-Supervised Learning on Graphs An official source code for Augmentation-Free Self-Supervised Learning on Graphs paper, accepted
Python ts2vg package provides high-performance algorithm implementations to build visibility graphs from time series data.
ts2vg: Time series to visibility graphs The Python ts2vg package provides high-performance algorithm implementations to build visibility graphs from t
Simple python3 implementation of microKanren with lots of type annotations for clarity
MicroKanren-py This is (yet another) python implementation of microKanren. It's a reasonably 1:1 translation of the code provided in the paper, but ev
ESP32 recording button presses, and serving webpage that graphs the numbers over time.
ESP32-IoT-button-graph-test ESP32 recording button presses, and serving webpage via webSockets in order to graph the responses. The objective was to t
GraphRNN: Generating Realistic Graphs with Deep Auto-regressive Models
GraphRNN: Generating Realistic Graphs with Deep Auto-regressive Model This repository is the official PyTorch implementation of GraphRNN, a graph gene
Fine-grained Control of Image Caption Generation with Abstract Scene Graphs
Faster R-CNN pretrained on VisualGenome This repository modifies maskrcnn-benchmark for object detection and attribute prediction on VisualGenome data
Statistical tests for the sequential locality of graphs
Statistical tests for the sequential locality of graphs You can assess the statistical significance of the sequential locality of an adjacency matrix
Official Codes for Graph Modularity:Towards Understanding the Cross-Layer Transition of Feature Representations in Deep Neural Networks.
Dynamic-Graphs-Construction Official Codes for Graph Modularity:Towards Understanding the Cross-Layer Transition of Feature Representations in Deep Ne
Code for testing convergence rates of Lipschitz learning on graphs
📈 LipschitzLearningRates The code in this repository reproduces the experimental results on convergence rates for k-nearest neighbor graph infinity L
Datastructures such as linked list, trees, graphs etc
datastructures datastructures such as linked list, trees, graphs etc Made a public repository for coding enthusiasts. Those who want to collaborate on
PyNNDescent is a Python nearest neighbor descent for approximate nearest neighbors.
PyNNDescent PyNNDescent is a Python nearest neighbor descent for approximate nearest neighbors. It provides a python implementation of Nearest Neighbo
Neural network graphs and training metrics for PyTorch, Tensorflow, and Keras.
HiddenLayer A lightweight library for neural network graphs and training metrics for PyTorch, Tensorflow, and Keras. HiddenLayer is simple, easy to ex
Some tentative models that incorporate label propagation to graph neural networks for graph representation learning in nodes, links or graphs.
Some tentative models that incorporate label propagation to graph neural networks for graph representation learning in nodes, links or graphs.
Build Graph Nets in Tensorflow
Graph Nets library Graph Nets is DeepMind's library for building graph networks in Tensorflow and Sonnet. Contact [email protected] for comments a
Non-Metric Space Library (NMSLIB): An efficient similarity search library and a toolkit for evaluation of k-NN methods for generic non-metric spaces.
Non-Metric Space Library (NMSLIB) Important Notes NMSLIB is generic but fast, see the results of ANN benchmarks. A standalone implementation of our fa
The software associated with a paper accepted at EMNLP 2021 titled "Open Knowledge Graphs Canonicalization using Variational Autoencoders".
Open-KG-canonicalization The software associated with a paper accepted at EMNLP 2021 titled "Open Knowledge Graphs Canonicalization using Variational
A Pytorch implement of paper "Anomaly detection in dynamic graphs via transformer" (TADDY).
TADDY: Anomaly detection in dynamic graphs via transformer This repo covers an reference implementation for the paper "Anomaly detection in dynamic gr
Learning to Map Large-scale Sparse Graphs on Memristive Crossbar
Release of AutoGMap:Learning to Map Large-scale Sparse Graphs on Memristive Crossbar For reproduction of our searched model, the Ubuntu OS is recommen
Extracting knowledge graphs from language models as a diagnostic benchmark of model performance.
Interpreting Language Models Through Knowledge Graph Extraction Idea: How do we interpret what a language model learns at various stages of training?
A paper using optimal transport to solve the graph matching problem.
GOAT A paper using optimal transport to solve the graph matching problem. https://arxiv.org/abs/2111.05366 Repo structure .github: Files specifying ho
[NeurIPS 2021] Large Scale Learning on Non-Homophilous Graphs: New Benchmarks and Strong Simple Methods
Large Scale Learning on Non-Homophilous Graphs: New Benchmarks and Strong Simple Methods Large Scale Learning on Non-Homophilous Graphs: New Benchmark
ObjTables: Tools for creating and reusing high-quality spreadsheets
ObjTables: Tools for creating and reusing high-quality spreadsheets ObjTables is a toolkit which makes it easy to use spreadsheets (e.g., XLSX workboo
Readings for "A Unified View of Relational Deep Learning for Polypharmacy Side Effect, Combination Therapy, and Drug-Drug Interaction Prediction."
Polypharmacy - DDI - Synergy Survey The Survey Paper This repository accompanies our survey paper A Unified View of Relational Deep Learning for Polyp
Generate knowledge graphs with interesting geometries, like lattices
Geometric Graphs Generate knowledge graphs with interesting geometries, like lattices. Works on Python 3.9+ because it uses cool new features. Get out
Readings for "A Unified View of Relational Deep Learning for Polypharmacy Side Effect, Combination Therapy, and Drug-Drug Interaction Prediction."
Polypharmacy - DDI - Synergy Survey The Survey Paper This repository accompanies our survey paper A Unified View of Relational Deep Learning for Polyp
Learning Multiresolution Matrix Factorization and its Wavelet Networks on Graphs
Project Learning Multiresolution Matrix Factorization and its Wavelet Networks on Graphs, https://arxiv.org/pdf/2111.01940.pdf. Authors Truong Son Hy
Implementation of our NeurIPS 2021 paper "A Bi-Level Framework for Learning to Solve Combinatorial Optimization on Graphs".
PPO-BiHyb This is the official implementation of our NeurIPS 2021 paper "A Bi-Level Framework for Learning to Solve Combinatorial Optimization on Grap
The code of paper ConE: Cone Embeddings for Multi-Hop Reasoning over Knowledge Graphs. Zhanqiu Zhang, Jie Wang, Jiajun Chen, Shuiwang Ji, Feng Wu. NeurIPS 2021.
ConE: Cone Embeddings for Multi-Hop Reasoning over Knowledge Graphs This is the code of paper ConE: Cone Embeddings for Multi-Hop Reasoning over Knowl
(to be released) [NeurIPS'21] Transformers Generalize DeepSets and Can be Extended to Graphs and Hypergraphs
Higher-Order Transformers Kim J, Oh S, Hong S, Transformers Generalize DeepSets and Can be Extended to Graphs and Hypergraphs, NeurIPS 2021. [arxiv] W
[NeurIPS 2021] Large Scale Learning on Non-Homophilous Graphs: New Benchmarks and Strong Simple Methods
Large Scale Learning on Non-Homophilous Graphs: New Benchmarks and Strong Simple Methods Large Scale Learning on Non-Homophilous Graphs: New Benchmark
SMORE: Knowledge Graph Completion and Multi-hop Reasoning in Massive Knowledge Graphs
SMORE: Knowledge Graph Completion and Multi-hop Reasoning in Massive Knowledge Graphs SMORE is a a versatile framework that scales multi-hop query emb
RIM: Reliable Influence-based Active Learning on Graphs.
RIM: Reliable Influence-based Active Learning on Graphs. This repository is the official implementation of RIM. Requirements To install requirements:
ConE: Cone Embeddings for Multi-Hop Reasoning over Knowledge Graphs
ConE: Cone Embeddings for Multi-Hop Reasoning over Knowledge Graphs This is the code of paper ConE: Cone Embeddings for Multi-Hop Reasoning over Knowl
Probabilistic Entity Representation Model for Reasoning over Knowledge Graphs
Implementation for the paper: Probabilistic Entity Representation Model for Reasoning over Knowledge Graphs, Nurendra Choudhary, Nikhil Rao, Sumeet Ka
Here are my graphs for hw_02
Let's Have A Look At Some Graphs! Graph 1: State Mentions in Congressperson's Tweets on 10/01/2017 The graph below uses this data set to demonstrate h
Convolutional Neural Networks on Graphs with Fast Localized Spectral Filtering
Graph ConvNets in PyTorch October 15, 2017 Xavier Bresson http://www.ntu.edu.sg/home/xbresson https://github.com/xbresson https://twitter.com/xbresson
A novel pipeline framework for multi-hop complex KGQA task. About the paper title: Improving Multi-hop Embedded Knowledge Graph Question Answering by Introducing Relational Chain Reasoning
Rce-KGQA A novel pipeline framework for multi-hop complex KGQA task. This framework mainly contains two modules, answering_filtering_module and relati
MetaStalk is a tool that can be used to generate graphs from the metadata of JPEG, TIFF, and HEIC images
MetaStalk About MetaStalk is a tool that can be used to generate graphs from the metadata of JPEG, TIFF, and HEIC images, which are tested. More forma
This repository contains the code for the paper in EMNLP 2021: "HRKD: Hierarchical Relational Knowledge Distillation for Cross-domain Language Model Compression".
HRKD: Hierarchical Relational Knowledge Distillation for Cross-domain Language Model Compression This repository contains the code for the paper in EM
Recommendation algorithms for large graphs
Fast recommendation algorithms for large graphs based on link analysis. License: Apache Software License Author: Emmanouil (Manios) Krasanakis Depende
This is our implementation of GHCF: Graph Heterogeneous Collaborative Filtering (AAAI 2021)
GHCF This is our implementation of the paper: Chong Chen, Weizhi Ma, Min Zhang, Zhaowei Wang, Xiuqiang He, Chenyang Wang, Yiqun Liu and Shaoping Ma. 2
Beyond Clicks: Modeling Multi-Relational Item Graph for Session-Based Target Behavior Prediction
MGNN-SPred This is our Tensorflow implementation for the paper: WenWang,Wei Zhang, Shukai Liu, Qi Liu, Bo Zhang, Leyu Lin, and Hongyuan Zha. 2020. Bey
RetaGNN: Relational Temporal Attentive Graph Neural Networks for Holistic Sequential Recommendation
RetaGNN: Relational Temporal Attentive Graph Neural Networks for Holistic Sequential Recommendation Pytorch based implemention of Relational Temporal
Residual2Vec: Debiasing graph embedding using random graphs
Residual2Vec: Debiasing graph embedding using random graphs This repository contains the code for S. Kojaku, J. Yoon, I. Constantino, and Y.-Y. Ahn, R
This folder contains the implementation of the multi-relational attribute propagation algorithm.
MrAP This folder contains the implementation of the multi-relational attribute propagation algorithm. It requires the package pytorch-scatter. Please
Source code for GNN-LSPE (Graph Neural Networks with Learnable Structural and Positional Representations)
Graph Neural Networks with Learnable Structural and Positional Representations Source code for the paper "Graph Neural Networks with Learnable Structu
A D3.js plugin that produces flame graphs from hierarchical data.
d3-flame-graph A D3.js plugin that produces flame graphs from hierarchical data. If you don't know what flame graphs are, check Brendan Gregg's post.
The official PyTorch implementation for the paper "sMGC: A Complex-Valued Graph Convolutional Network via Magnetic Laplacian for Directed Graphs".
Magnetic Graph Convolutional Networks About The official PyTorch implementation for the paper sMGC: A Complex-Valued Graph Convolutional Network via M
SlideGraph+: Whole Slide Image Level Graphs to Predict HER2 Status in Breast Cancer
SlideGraph+: Whole Slide Image Level Graphs to Predict HER2 Status in Breast Cancer A novel graph neural network (GNN) based model (termed SlideGraph+
Code for the paper Relation Prediction as an Auxiliary Training Objective for Improving Multi-Relational Graph Representations (AKBC 2021).
Relation Prediction as an Auxiliary Training Objective for Knowledge Base Completion This repo provides the code for the paper Relation Prediction as