128 Repositories
Python scientific-formats Libraries
Convert shellcode into :sparkles: different :sparkles: formats!
Bluffy Convert shellcode into ✨ different ✨ formats! Bluffy is a utility which was used in experiments to bypass Anti-Virus products (statically) by f
Jupyter Dock is a set of Jupyter Notebooks for performing molecular docking protocols interactively, as well as visualizing, converting file formats and analyzing the results.
Molecular Docking integrated in Jupyter Notebooks Description | Citation | Installation | Examples | Limitations | License Table of content Descriptio
Unofficial Playdate reverse-engineering notes/tools - covers file formats, server API and USB commands
Unofficial Playdate reverse-engineering notes/tools - covers file formats, server API and USB commands ⚠️ This documentation is unofficial and is not
Scientific Programming: A Crash Course
Scientific Programming: A Crash Course Welcome to the Scientific Programming course. My name is Jon Carr and I am a postdoc in Davide Crepaldi's lab.
Citation Intent Classification in scientific papers using the Scicite dataset an Pytorch
Citation Intent Classification Table of Contents About the Project Built With Installation Usage Acknowledgments About The Project Citation Intent Cla
GT4SD, an open-source library to accelerate hypothesis generation in the scientific discovery process.
The GT4SD (Generative Toolkit for Scientific Discovery) is an open-source platform to accelerate hypothesis generation in the scientific discovery process. It provides a library for making state-of-the-art generative AI models easier to use.
Scripts to convert the Ted-MDB corpora into the formats for DISRPT shared task and the converted corpora
Scripts to convert the Ted-MDB corpora into the formats for DISRPT shared task and the converted corpora.
Arxiv harvester - Poor man's simple harvester for arXiv resources
Poor man's simple harvester for arXiv resources This modest Python script takes
A web app builds using streamlit API with python backend to analyze and pick insides from multiple data formats.
Data-Analysis-Web-App Data Analysis Web App can analysis data in multiple formates(csv, txt, xls, xlsx, ods, odt) and gives shows you the analysis in
Read write method - Read files in various types of formats
一个关于所有格式文件读取的方法 1。 问题描述: 各种各样的文件格式,读写操作非常的麻烦,能够有一种方法,可以整合所有格式的文件,方便用户进行读取和写入。 2
A simple CLI tool for converting logs from Poker Now games to other formats
🂡 Poker Now Log Converter 🂡 A command line utility for converting logs from Poker Now games to other formats. Introduction Poker Now is a free onlin
This code is the implementation of the paper "Coherence-Based Distributed Document Representation Learning for Scientific Documents".
Introduction This code is the implementation of the paper "Coherence-Based Distributed Document Representation Learning for Scientific Documents". If
FURY - A software library for scientific visualization in Python
Free Unified Rendering in Python A software library for scientific visualization in Python. General Information • Key Features • Installation • How to
ruptures: change point detection in Python
Welcome to ruptures ruptures is a Python library for off-line change point detection. This package provides methods for the analysis and segmentation
Finite Element Analysis
FElupe - Finite Element Analysis FElupe is a Python 3.6+ finite element analysis package focussing on the formulation and numerical solution of nonlin
Memory-efficient optimum einsum using opt_einsum planning and PyTorch kernels.
opt-einsum-torch There have been many implementations of Einstein's summation. numpy's numpy.einsum is the least efficient one as it only runs in sing
Scientific measurement library for instruments, experiments, and live-plotting
PyMeasure scientific package PyMeasure makes scientific measurements easy to set up and run. The package contains a repository of instrument classes a
A stable and Fast telegram video convertor bot which can compress, convert(video into audio and other video formats), rename with permanent thumbnail and trim.
ᴠɪᴅᴇᴏ ᴄᴏɴᴠᴇʀᴛᴏʀ A stable and Fast telegram video convertor bot which can compress, convert(video into audio and other video formats), rename and trim.
An open-source systems and controls toolbox for Python3
harold A control systems package for Python=3.6. Introduction This package is written with the ambition of providing a full-fledged control systems s
OpenQuake's Engine for Seismic Hazard and Risk Analysis
OpenQuake Engine The OpenQuake Engine is an open source application that allows users to compute seismic hazard and seismic risk of earthquakes on a g
Python package for the analysis and visualisation of finite-difference fields.
discretisedfield Marijan Beg1,2, Martin Lang2, Samuel Holt3, Ryan A. Pepper4, Hans Fangohr2,5,6 1 Department of Earth Science and Engineering, Imperia
A Boilerplate repo for Scientific Python Open Science projects
A Boilerplate repo for Scientific Python Open Science projects Installation Clone this repo If you need a fresh python environment, run $ conda env cr
SIR model parameter estimation using a novel algorithm for differentiated uniformization.
TenSIR Parameter estimation on epidemic data under the SIR model using a novel algorithm for differentiated uniformization of Markov transition rate m
SciPy library main repository
SciPy SciPy (pronounced "Sigh Pie") is an open-source software for mathematics, science, and engineering. It includes modules for statistics, optimiza
freeCodeCamp Scientific Computing with Python Project for Certification.
Time_Calculator_freeCodeCamp freeCodeCamp Scientific Computing with Python Project for Certification. Write a function named add_time that takes in tw
freeCodeCamp Scientific Computing with Python Project for Certification.
Polygon_Area_Calculator freeCodeCamp Python Project freeCodeCamp Scientific Computing with Python Project for Certification. In this project you will
Automatic labeling, conversion of different data set formats, sample size statistics, model cascade
Simple Gadget Collection for Object Detection Tasks Automatic image annotation Conversion between different annotation formats Obtain statistical info
Evaluation of file formats in the context of geo-referenced 3D geometries.
Geo-referenced Geometry File Formats Classic geometry file formats as .obj, .off, .ply, .stl or .dae do not support the utilization of coordinate syst
Make scripted visualizations in blender
Scripted visualizations in blender The goal of this project is to script 3D scientific visualizations using blender. To achieve this, we aim to bring
Code for ACL 2020 paper "Rigid Formats Controlled Text Generation"
SongNet SongNet: SongCi + Song (Lyrics) + Sonnet + etc. @inproceedings{li-etal-2020-rigid, title = "Rigid Formats Controlled Text Generation",
Efficient and Scalable Physics-Informed Deep Learning and Scientific Machine Learning on top of Tensorflow for multi-worker distributed computing
Notice: Support for Python 3.6 will be dropped in v.0.2.1, please plan accordingly! Efficient and Scalable Physics-Informed Deep Learning Collocation-
Physics-Informed Neural Networks (PINN) and Deep BSDE Solvers of Differential Equations for Scientific Machine Learning (SciML) accelerated simulation
NeuralPDE NeuralPDE.jl is a solver package which consists of neural network solvers for partial differential equations using scientific machine learni
Read and write life sciences file formats
Python-bioformats is a Python wrapper for Bio-Formats, a standalone Java library for reading and writing life sciences image file formats. Bio-Formats
Simulation and Parameter Estimation in Geophysics
Simulation and Parameter Estimation in Geophysics - A python package for simulation and gradient based parameter estimation in the context of geophysical applications.
yt is an open-source, permissively-licensed Python library for analyzing and visualizing volumetric data.
The yt Project yt is an open-source, permissively-licensed Python library for analyzing and visualizing volumetric data. yt supports structured, varia
A GUI-based audio player with support for a large variety of formats
Miza-Player A GUI-based audio player with support for a large variety of formats, able to play from web-hosted media platforms such as YouTube, includ
A Python Based Utility for Processing GST-Return JSON Files to Multiple Formats
GSTR 1/2A Utility by Shan.tk Open Source GSTR 1/GSTR 2A JSON to Excel utility based on Python. Useful for Auditors in Verifying GSTR 1 Return Invoices
The fundamental package for scientific computing with Python.
NumPy is the fundamental package needed for scientific computing with Python. Website: https://www.numpy.org Documentation: https://numpy.org/doc Mail
Python library for computer vision labeling tasks. The core functionality is to translate bounding box annotations between different formats-for example, from coco to yolo.
PyLabel pip install pylabel PyLabel is a Python package to help you prepare image datasets for computer vision models including PyTorch and YOLOv5. I
Plot-configurations for scientific publications, purely based on matplotlib
TUEplots Plot-configurations for scientific publications, purely based on matplotlib. Usage Please have a look at the examples in the example/ directo
A script to check for common mistakes in LaTeX source files of scientific papers.
LaTeX Paper Linter This script checks for common mistakes in LaTeX source files of scientific papers. Usage python3 paperlint.py file.tex [-i/x inc
Convert shellcode into :sparkles: different :sparkles: formats!
Bluffy Convert shellcode into ✨ different ✨ formats! Bluffy is a utility which was used in experiments to bypass Anti-Virus products (statically) by f
Package to Encode/Decode some common file formats to json
ZnJSON Package to Encode/Decode some common file formats to json Available via pip install znjson In comparison to pickle this allows having readable
A note taker for NVDA. Allows the user to create, edit, view, manage and export notes to different formats.
Quick Notetaker add-on for NVDA The Quick Notetaker add-on is a wonderful tool which allows writing notes quickly and easily anytime and from any app
Python script to tabulate data formats like json, csv, html, etc
pyT PyT is a a command line tool and as well a library for visualising various data formats like: JSON HTML Table CSV XML, etc. Features Print table o
A fast, pure python implementation of the MuyGPs Gaussian process realization and training algorithm.
Fast implementation of the MuyGPs Gaussian process hyperparameter estimation algorithm MuyGPs is a GP estimation method that affords fast hyperparamet
New time-based UUID formats which are suited for use as a database key
uuid6 New time-based UUID formats which are suited for use as a database key. This module extends immutable UUID objects (the UUID class) with the fun
Altair extension for saving charts in a variety of formats.
Altair Saver This packge provides extensions to Altair for saving charts to a variety of output types. Supported output formats are: .json/.vl.json: V
Data imputations library to preprocess datasets with missing data
Impyute is a library of missing data imputation algorithms. This library was designed to be super lightweight, here's a sneak peak at what impyute can do.
Fast EMD for Python: a wrapper for Pele and Werman's C++ implementation of the Earth Mover's Distance metric
PyEMD: Fast EMD for Python PyEMD is a Python wrapper for Ofir Pele and Michael Werman's implementation of the Earth Mover's Distance that allows it to
Python+Numpy+OpenGL: fast, scalable and beautiful scientific visualization
Python+Numpy+OpenGL: fast, scalable and beautiful scientific visualization
A set of useful perceptually uniform colormaps for plotting scientific data
Colorcet: Collection of perceptually uniform colormaps Build Status Coverage Latest dev release Latest release Docs What is it? Colorcet is a collecti
Scikit-Garden or skgarden is a garden for Scikit-Learn compatible decision trees and forests.
Scikit-Garden or skgarden (pronounced as skarden) is a garden for Scikit-Learn compatible decision trees and forests.
A Python package for performing pore network modeling of porous media
Overview of OpenPNM OpenPNM is a comprehensive framework for performing pore network simulations of porous materials. More Information For more detail
AI-powered literature discovery and review engine for medical/scientific papers
AI-powered literature discovery and review engine for medical/scientific papers paperai is an AI-powered literature discovery and review engine for me
Convert Wii UI formats to JSON5 and vice versa
Convert Wii UI formats to JSON5 and vice versa
This repository is maintained for the scientific paper tittled " Study of keyword extraction techniques for Electric Double Layer Capacitor domain using text similarity indexes: An experimental analysis "
kwd-extraction-study This repository is maintained for the scientific paper tittled " Study of keyword extraction techniques for Electric Double Layer
Scientific Visualization: Python + Matplotlib
An open access book on scientific visualization using python and matplotlib
Python bindings for JIGSAW: a Delaunay-based unstructured mesh generator.
JIGSAW: An unstructured mesh generator JIGSAW is an unstructured mesh generator and tessellation library; designed to generate high-quality triangulat
MetPy is a collection of tools in Python for reading, visualizing and performing calculations with weather data.
MetPy MetPy is a collection of tools in Python for reading, visualizing and performing calculations with weather data. MetPy follows semantic versioni
Powerful, efficient particle trajectory analysis in scientific Python.
freud Overview The freud Python library provides a simple, flexible, powerful set of tools for analyzing trajectories obtained from molecular dynamics
Scrape plants scientific name information from Agroforestry Species Switchboard 2.0.
Agroforestry Species Switchboard 2.0 Scraper Scrape plants scientific name information from Species Switchboard 2.0. Requirements python = 3.10 (you
A python module for scientific analysis of 3D objects based on VTK and Numpy
A lightweight and powerful python module for scientific analysis and visualization of 3d objects.
Freecodecamp Scientific Computing with Python Certification; Solution for Challenge 2: Time Calculator
Assignment Write a function named add_time that takes in two required parameters and one optional parameter: a start time in the 12-hour clock format
UI for converting various point cloud file formats
Point cloud format converter This coverter based on open3d. If you're using old ROS1 i suggest to use conda python3 evn to install requirements. Todo
Can we visualize a large scientific data set with a surrogate model? We're building a GAN for the Earth's Mantle Convection data set to see if we can!
EarthGAN - Earth Mantle Surrogate Modeling Can a surrogate model of the Earth’s Mantle Convection data set be built such that it can be readily run in
A GUI based datamoshing apllication for everyone! Apply this glitch to your videos and gifs. Supports all video formats!
A GUI based datamoshing apllication for everyone! Apply this glitch to your videos and gifs. Supports all video formats!
Generate custom detailed survey paper with topic clustered sections and proper citations, from just a single query in just under 30 mins !!
Auto-Research A no-code utility to generate a detailed well-cited survey with topic clustered sections (draft paper format) and other interesting arti
This python module allows to extract data from the RAW-file-format produces by devices from Thermo Fisher Scientific.
fisher_py This Python module allows access to Thermo Orbitrap raw mass spectrometer files. Using this library makes it possible to automate the analys
EMNLP 2021 Findings' paper, SCICAP: Generating Captions for Scientific Figures
SCICAP: Scientific Figures Dataset This is the Github repo of the EMNLP 2021 Findings' paper, SCICAP: Generating Captions for Scientific Figures (Hsu
Differentiable scientific computing library
xitorch: differentiable scientific computing library xitorch is a PyTorch-based library of differentiable functions and functionals that can be widely
Deep learning library for solving differential equations and more
DeepXDE Voting on whether we should have a Slack channel for discussion. DeepXDE is a library for scientific machine learning. Use DeepXDE if you need
Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Python
AICSImageIO Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Pure Python Features Supports reading metadata and imaging
A pure python implementation of the GIMP XCF image format. Use this to interact with GIMP image formats
Pure Python implementation of the GIMP image formats (.xcf projects as well as brushes, patterns, etc)
Glue is a python project to link visualizations of scientific datasets across many files.
Glue Glue is a python project to link visualizations of scientific datasets across many files. Click on the image for a quick demo: Features Interacti
SciBERT is a BERT model trained on scientific text.
SciBERT is a BERT model trained on scientific text.
EasyBuild is a software build and installation framework that allows you to manage (scientific) software on High Performance Computing (HPC) systems in an efficient way.
EasyBuild is a software build and installation framework that allows you to manage (scientific) software on High Performance Computing (HPC) systems in an efficient way.
Open Data Cube analyses continental scale Earth Observation data through time
Open Data Cube Core Overview The Open Data Cube Core provides an integrated gridded data analysis environment for decades of analysis ready earth obse
Toolchest provides APIs for scientific and bioinformatic data analysis.
Toolchest Python Client Toolchest provides APIs for scientific and bioinformatic data analysis. It allows you to abstract away the costliness of runni
Scientific Computation Methods in C and Python (Open for Hacktoberfest 2021)
Sci - cpy README is a stub. Do expand it. Objective This repository is meant to be a ready reference for scientific computation methods. Do ⭐ it if yo
SCICO is a Python package for solving the inverse problems that arise in scientific imaging applications.
Scientific Computational Imaging COde (SCICO) SCICO is a Python package for solving the inverse problems that arise in scientific imaging applications
Scitizen - Help scientific research for the benefit of mankind and humanity 🔬
Scitizen - Help scientific research for the benefit of mankind and humanity 🔬 Scitizen has been built from the ground up to give everyone the possibi
Official Pytorch implementation of ICLR 2018 paper Deep Learning for Physical Processes: Integrating Prior Scientific Knowledge.
Deep Learning for Physical Processes: Integrating Prior Scientific Knowledge: Official Pytorch implementation of ICLR 2018 paper Deep Learning for Phy
2nd solution of ICDAR 2021 Competition on Scientific Literature Parsing, Task B.
TableMASTER-mmocr Contents About The Project Method Description Dependency Getting Started Prerequisites Installation Usage Data preprocess Train Infe
MoviePy is a Python library for video editing, can read and write all the most common audio and video formats
MoviePy is a Python library for video editing: cutting, concatenations, title insertions, video compositing (a.k.a. non-linear editing), video processing, and creation of custom effects. See the gallery for some examples of use.
IDRLnet, a Python toolbox for modeling and solving problems through Physics-Informed Neural Network (PINN) systematically.
IDRLnet IDRLnet is a machine learning library on top of PyTorch. Use IDRLnet if you need a machine learning library that solves both forward and inver
Poetry plugin to bundle projects into various formats
Poetry bundle plugin This package is a plugin that allows the bundling of Poetry projects into various formats. Installation The easiest way to instal
DRIFT is a tool for Diachronic Analysis of Scientific Literature.
About DRIFT is a tool for Diachronic Analysis of Scientific Literature. The application offers user-friendly and customizable utilities for two modes:
Scientific color maps and standardization tools
Scicomap is a package that provides scientific color maps and tools to standardize your favourite color maps if you don't like the built-in ones. Scicomap currently provides sequential, bi-sequential, diverging, circular, qualitative and miscellaneous color maps. You can easily draw examples, compare the rendering, see how colorblind people will perceive the color maps. I will illustrate the scicomap capabilities below.
Markup is an online annotation tool that can be used to transform unstructured documents into structured formats for NLP and ML tasks, such as named-entity recognition. Markup learns as you annotate in order to predict and suggest complex annotations. Markup also provides integrated access to existing and custom ontologies, enabling the prediction and suggestion of ontology mappings based on the text you're annotating.
Markup is an online annotation tool that can be used to transform unstructured documents into structured formats for NLP and ML tasks, such as named-entity recognition. Markup learns as you annotate in order to predict and suggest complex annotations. Markup also provides integrated access to existing and custom ontologies, enabling the prediction and suggestion of ontology mappings based on the text you're annotating.
This is django-import-export module that exports data into many formats
django-import-export This is django-import-export module which exports data into many formats, you can implement this in your admin panel. - Dehydrat
Poetry plugin to export the dependencies to various formats
Poetry export plugin This package is a plugin that allows the export of locked packages to various formats. Note: For now, only the requirements.txt f
A scientific and useful toolbox, which contains practical and effective long-tail related tricks with extensive experimental results
Bag of tricks for long-tailed visual recognition with deep convolutional neural networks This repository is the official PyTorch implementation of AAA
Python with the scientific stack, compiled to WebAssembly.
Pyodide may be used in any context where you want to run Python inside a web browser.
Ethereum ETL lets you convert blockchain data into convenient formats like CSVs and relational databases.
Python scripts for ETL (extract, transform and load) jobs for Ethereum blocks, transactions, ERC20 / ERC721 tokens, transfers, receipts, logs, contracts, internal transactions.
SkipGNN: Predicting Molecular Interactions with Skip-Graph Networks (Scientific Reports)
SkipGNN: Predicting Molecular Interactions with Skip-Graph Networks Molecular interaction networks are powerful resources for the discovery. While dee
xitorch: differentiable scientific computing library
xitorch is a PyTorch-based library of differentiable functions and functionals that can be widely used in scientific computing applications as well as deep learning.
monolish: MONOlithic Liner equation Solvers for Highly-parallel architecture
monolish is a linear equation solver library that monolithically fuses variable data type, matrix structures, matrix data format, vendor specific data transfer APIs, and vendor specific numerical algebra libraries.
ArrayFire: a general purpose GPU library.
ArrayFire is a general-purpose library that simplifies the process of developing software that targets parallel and massively-parallel architectures i
CUDA integration for Python, plus shiny features
PyCUDA lets you access Nvidia's CUDA parallel computation API from Python. Several wrappers of the CUDA API already exist-so what's so special about P