Python Data-Analytics-on-Genomes-and-Genetics Resources

Text preprocessing, representation and visualization from zero to hero. From zero to hero • Installation • Getting Started • Examples • API • FAQ • Co

DeepMatcher DeepMatcher is a Python package for performing entity and text matching using deep learning. It provides built-in neural networks and util

Texar is a toolkit aiming to support a broad set of machine learning, especially natural language processing and text generation tasks. Texar provides

A Deep Learning NLP/NLU library by Intel® AI Lab Overview | Models | Installation | Examples | Documentation | Tutorials | Contributing NLP Architect

Scattertext 0.1.0.0 A tool for finding distinguishing terms in corpora and displaying them in an interactive HTML scatter plot. Points corresponding t

Basic Utilities for PyTorch Natural Language Processing (NLP) PyTorch-NLP, or torchnlp for short, is a library of basic utilities for PyTorch NLP. tor

This repository contains custom pipes and models related to using spaCy for scientific documents. In particular, there is a custom tokenizer that adds

spacy-transformers: Use pretrained transformers like BERT, XLNet and GPT-2 in spaCy This package provides spaCy components and architectures to use tr

FlashText This module can be used to replace keywords in sentences or extract keywords from sentences. It is based on the FlashText algorithm. Install

Translations 🇩🇪 DE 🇫🇷 FR 🇭🇺 HU 🇮🇩 ID 🇮🇹 IT 🇳🇱 NL 🇧🇷 PT-BR 🇷🇺 RU 🇨🇳 ZH ➡️ Documentation | Discord | Installation Guide ⬅️ Fully autom

pyahocorasick pyahocorasick is a fast and memory efficient library for exact or approximate multi-pattern string search meaning that you can find mult

PyTextRank PyTextRank is a Python implementation of TextRank as a spaCy pipeline extension, used to: extract the top-ranked phrases from text document

fastNLP fastNLP是一款轻量级的自然语言处理（NLP）工具包，目标是快速实现NLP任务以及构建复杂模型。 fastNLP具有如下的特性： 统一的Tabular式数据容器，简化数据预处理过程； 内置多种数据集的Loader和Pipe，省去预处理代码; 各种方便的NLP工具，例如Embedd

Automatic text summarizer Simple library and command line utility for extracting summary from HTML pages or plain texts. The package also contains sim

textgenrnn Easily train your own text-generating neural network of any size and complexity on any text dataset with a few lines of code, or quickly tr

ParlAI (pronounced “par-lay”) is a python framework for sharing, training and testing dialogue models, from open-domain chitchat, to task-oriented dia

Haystack is an end-to-end framework that enables you to build powerful and production-ready pipelines for different search use cases. Whether you want

jellyfish Jellyfish is a python library for doing approximate and phonetic matching of strings. Written by James Turk [email protected] and Michael

VADER-Sentiment-Analysis VADER (Valence Aware Dictionary and sEntiment Reasoner) is a lexicon and rule-based sentiment analysis tool that is specifica

ftfy: fixes text for you print(fix_encoding("(ง'⌣')ง")) (ง'⌣')ง Full documentation: https://ftfy.readthedocs.org Testimonials “My life is li

DeepPavlov is an open-source conversational AI library built on TensorFlow, Keras and PyTorch. DeepPavlov is designed for development of production re

textacy: NLP, before and after spaCy textacy is a Python library for performing a variety of natural language processing (NLP) tasks, built on the hig

Dedupe Python Library dedupe is a python library that uses machine learning to perform fuzzy matching, deduplication and entity resolution quickly on

Provides an implementation of today's most used tokenizers, with a focus on performance and versatility. Main features: Train new vocabularies and tok

Snowball is a small string processing language for creating stemming algorithms for use in Information Retrieval, plus a collection of stemming algori

TextBlob: Simplified Text Processing Homepage: https://textblob.readthedocs.io/ TextBlob is a Python (2 and 3) library for processing textual data. It

An Apache 2.0 NLP research library, built on PyTorch, for developing state-of-the-art deep learning models on a wide variety of linguistic tasks. Quic

torchtext This repository consists of: torchtext.data: Generic data loaders, abstractions, and iterators for text (including vocabulary and word vecto

fastText fastText is a library for efficient learning of word representations and sentence classification. Table of contents Resources Models Suppleme

Rasa Open Source Rasa is an open source machine learning framework to automate text-and voice-based conversations. With Rasa, you can build contextual

State-of-the-art Natural Language Processing for PyTorch and TensorFlow 2.0 🤗 Transformers provides thousands of pretrained models to perform tasks o

spaCy: Industrial-strength NLP spaCy is a library for advanced Natural Language Processing in Python and Cython. It's built on the very latest researc

ivis Implementation of the ivis algorithm as described in the paper Structure-preserving visualisation of high dimensional single-cell datasets. Ivis

pivottablejs: the Python module Drag’n’drop Pivot Tables and Charts for Jupyter/IPython Notebook, care of PivotTable.js Installation pip install pivot

plotnine Latest Release License DOI Build Status Coverage Documentation plotnine is an implementation of a grammar of graphics in Python, it is based

The open-source tool for building high-quality datasets and computer vision models. Website • Docs • Try it Now • Tutorials • Examples • Blog • Commun

PyWaffle PyWaffle is an open source, MIT-licensed Python package for plotting waffle charts. It provides a Figure constructor class Waffle, which coul

animatplot A python package for making interactive as well as animated plots with matplotlib. Requires Python = 3.5 Matplotlib = 2.2 (because slider

Lets-Plot Lets-Plot is an open-source plotting library for statistical data. It is implemented using the Kotlin programming language. The design of Le

In-depth EDA (target analysis, comparison, feature analysis, correlation) in two lines of code! Sweetviz is an open-source Python library that generat

HiPlot - High dimensional Interactive Plotting HiPlot is a lightweight interactive visualization tool to help AI researchers discover correlations and

JoyPy JoyPy is a one-function Python package based on matplotlib + pandas with a single purpose: drawing joyplots (a.k.a. ridgeline plots). The code f

IPython Vega IPython/Jupyter notebook module for Vega 5, and Vega-Lite 4. Notebooks with embedded visualizations can be viewed on GitHub and nbviewer.

Pandas-Bokeh provides a Bokeh plotting backend for Pandas, GeoPandas and Pyspark DataFrames, similar to the already existing Visualization feature of

Multicore t-SNE This is a multicore modification of Barnes-Hut t-SNE by L. Van der Maaten with python and Torch CFFI-based wrappers. This code also wo

Introduction The facets project contains two visualizations for understanding and analyzing machine learning datasets: Facets Overview and Facets Dive

Chartify Chartify is a Python library that makes it easy for data scientists to create charts. Why use Chartify? Consistent input data format: Spend l

hvPlot A high-level plotting API for the PyData ecosystem built on HoloViews. Build Status Coverage Latest dev release Latest release Docs What is it?

"To deal with hyper-planes in a 14 dimensional space, visualize a 3D space and say 'fourteen' very loudly. Everyone does it." - Geoff Hinton Overview

PyVista Deployment Build Status Metrics Citation License Community 3D plotting and mesh analysis through a streamlined interface for the Visualization

Perspective is an interactive visualization component for large, real-time datasets. Originally developed for J.P. Morgan's trading business, Perspect

TensorFlow Data Validation TensorFlow Data Validation (TFDV) is a library for exploring and validating machine learning data. It is designed to be hig

missingno Messy datasets? Missing values? missingno provides a small toolset of flexible and easy-to-use missing data visualizations and utilities tha

Turn even the largest data into images, accurately Build Status Coverage Latest dev release Latest release Docs Support What is it? Datashader is a da

HoloViews Stop plotting your data - annotate your data and let it visualize itself. HoloViews is an open-source Python library designed to make data a

PyQtGraph A pure-Python graphics library for PyQt5/PyQt6/PySide2/PySide6 Copyright 2020 Luke Campagnola, University of North Carolina at Chapel Hill h

UMAP Uniform Manifold Approximation and Projection (UMAP) is a dimension reduction technique that can be used for visualisation similarly to t-SNE, bu

Pandas Profiling Documentation | Slack | Stack Overflow Generates profile reports from a pandas DataFrame. The pandas df.describe() function is great

Bokeh is an interactive visualization library for modern web browsers. It provides elegant, concise construction of versatile graphics, and affords hi

Dash Dash is the most downloaded, trusted Python framework for building ML & data science web apps. Built on top of Plotly.js, React and Flask, Dash t

seaborn: statistical data visualization Seaborn is a Python visualization library based on matplotlib. It provides a high-level interface for drawing

Play and Record Sound with Python This Python module provides bindings for the PortAudio library and a few convenience functions to play and record Nu

Common Fate Transform and Model for Python This package is a python implementation of the Common Fate Transform and Model to be used for audio source

SpeechRecognition Library for performing speech recognition, with support for several engines and APIs, online and offline. Speech recognition engine/

A Python library for audio feature extraction, classification, segmentation and applications This doc contains general info. Click here for the comple

Audiomentations A Python library for audio data augmentation. Inspired by albumentations. Useful for deep learning. Runs on CPU. Supports mono audio a

SpeechPy Official Project Documentation Table of Contents Documentation Which Python versions are supported Citation How to Install? Local Installatio

python_speech_features This library provides common speech features for ASR including MFCCs and filterbank energies. If you are not sure what MFCCs ar

MDCT A fast MDCT implementation using SciPy and FFTs Installation As usual pip install mdct Dependencies NumPy SciPy STFT Usage import mdct spectrum

torchaudio: an audio library for PyTorch The aim of torchaudio is to apply PyTorch to the audio domain. By supporting PyTorch, torchaudio follows the

AUDIOMATE Audiomate is a library for easy access to audio datasets. It provides the datastructures for accessing/loading different datasets in a gener

tinytag tinytag is a library for reading music meta data of MP3, OGG, OPUS, MP4, M4A, FLAC, WMA and Wave files with python Install pip install tinytag

Flask-Moment This extension enhances Jinja2 templates with formatting of dates and times using moment.js. Quick Start Step 1: Initialize the extension

The Mixer is a helper to generate instances of Django or SQLAlchemy models. It's useful for testing and fixture replacement. Fast and convenient test-

Flask-Dance Doing the OAuth dance with style using Flask, requests, and oauthlib. Currently, only OAuth consumers are supported, but this project coul

Flask-Pundit A simple flask extension to organize resource authorization and scoping. This extension is heavily inspired by the ruby Pundit library. I

Authlib The ultimate Python library in building OAuth and OpenID Connect servers. JWS, JWK, JWA, JWT are included. Authlib is compatible with Python2.

flask-praetorian Strong, Simple, and Precise security for Flask APIs API security should be strong, simple, and precise like a Roman Legionary. This p

Flask-HTTPAuth Simple extension that provides Basic and Digest HTTP authentication for Flask routes. Installation The easiest way to install this is t

Flask-User v1.0 Attention: Flask-User v1.0 is a Production/Stable version. The previous version is Flask-User v0.6. User Authentication and Management

Note This project is non maintained anymore. Consider the Flask-Security-Too project as an alternative. Flask-Security It quickly adds security featur

Flask-Potion Description Flask-Potion is a powerful Flask extension for building RESTful JSON APIs. Potion features include validation, model resource

Flask RestPlus IMPORTANT NOTICE: This project has been forked to Flask-RESTX and will be maintained by by the python-restx organization. Flask-RESTPlu

Real-time monitor and web admin for Celery distributed task queue

msgpack-asgi msgpack-asgi allows you to add automatic MessagePack content negotiation to ASGI applications (Starlette, FastAPI, Quart, etc.), with a s

Jupter Notebook REST API Run your jupyter notebooks as a REST API endpoint. This isn't a jupyter server but rather just a way to run your notebooks as

Starlette-OpenTracing OpenTracing support for Starlette and FastApi. Inspired by: Flask-OpenTracing OpenTracing implementations exist for major distri

starlette_exporter Prometheus exporter for Starlette and FastAPI. The middleware collects basic metrics: Counter: starlette_requests_total Histogram:

starlette context Middleware for Starlette that allows you to store and access the context data of a request. Can be used with logging so logs automat

SlowApi A rate limiting library for Starlette and FastAPI adapted from flask-limiter. Note: this is alpha quality code still, the API may change, and

Abstracting FastAPI Services See this article for more information: https://camillovisini.com/article/abstracting-fastapi-services/ Poetry poetry inst

ec2-spot-converter This tool converts existing AWS EC2 instances back and forth between On-Demand and 'persistent' Spot billing models while preservin

Revolut Stocks calculator for Bulgarian National Revenue Agency Information Processing and calculating the required information about stock possession

Cobalt Strike Resources This repository contains: analyze.py: a script to analyze a Cobalt Strike beacon (python analyze.py BEACON) extract.py; extrac

UA-GEC: Grammatical Error Correction and Fluency Corpus for the Ukrainian Language This repository contains UA-GEC data and an accompanying Python lib

Shortformer This repository contains the code and the final checkpoint of the Shortformer model. This file explains how to run our experiments on the

A Fast and Stable GAN for Small and High Resolution Imagesets - pytorch The official pytorch implementation of the paper "Towards Faster and Stabilize

Overwiew Expo is an simple and straightforward way to get a visual impression of all your current virtual desktops that many compositing window manage

Ravens is a collection of simulated tasks in PyBullet for learning vision-based robotic manipulation, with emphasis on pick and place. It features a Gym-like API with 10 tabletop rearrangement tasks, each with (i) a scripted oracle that provides expert demonstrations (for imitation learning), and (ii) reward functions that provide partial credit (for reinforcement learning).

Extending JAX with custom C++ and CUDA code This repository is meant as a tutorial demonstrating the infrastructure required to provide custom ops in