715 Repositories
Python call-graph Libraries
Paddle implementation for "Highly Efficient Knowledge Graph Embedding Learning with Closed-Form Orthogonal Procrustes Analysis" (NAACL 2021)
ProcrustEs-KGE Paddle implementation for Highly Efficient Knowledge Graph Embedding Learning with Orthogonal Procrustes Analysis 🙈 A more detailed re
Code for the paper "How Attentive are Graph Attention Networks?"
How Attentive are Graph Attention Networks? This repository is the official implementation of How Attentive are Graph Attention Networks?. The PyTorch
This is the repo for the paper `SumGNN: Multi-typed Drug Interaction Prediction via Efficient Knowledge Graph Summarization'. (published in Bioinformatics'21)
SumGNN: Multi-typed Drug Interaction Prediction via Efficient Knowledge Graph Summarization This is the code for our paper ``SumGNN: Multi-typed Drug
A tensorflow implementation of GCN-LPA
GCN-LPA This repository is the implementation of GCN-LPA (arXiv): Unifying Graph Convolutional Neural Networks and Label Propagation Hongwei Wang, Jur
Implementation for Simple Spectral Graph Convolution in ICLR 2021
Simple Spectral Graph Convolutional Overview This repo contains an example implementation of the Simple Spectral Graph Convolutional (S^2GC) model. Th
(AAAI2020)Grapy-ML: Graph Pyramid Mutual Learning for Cross-dataset Human Parsing
Grapy-ML: Graph Pyramid Mutual Learning for Cross-dataset Human Parsing This repository contains pytorch source code for AAAI2020 oral paper: Grapy-ML
jaxfg - Factor graph-based nonlinear optimization library for JAX.
Factor graphs + nonlinear optimization in JAX
Explore related sequences in the OEIS
OEIS explorer This is a tool for exploring two different kinds of relationships between sequences in the OEIS: mentions (links) of other sequences on
A lightweight (serverless) native python parallel processing framework based on simple decorators and call graphs.
A lightweight (serverless) native python parallel processing framework based on simple decorators and call graphs, supporting both control flow and dataflow execution paradigms as well as de-centralized CPU & GPU scheduling.
Deep functional residue identification
DeepFRI Deep functional residue identification Citing @article {Gligorijevic2019, author = {Gligorijevic, Vladimir and Renfrew, P. Douglas and Koscio
Audio processor to map oracle notes in the VoG raid in Destiny 2 to call outs.
vog_oracles Audio processor to map oracle notes in the VoG raid in Destiny 2 to call outs. Huge thanks to mzucker on GitHub for the note detection cod
Tensorflow implementation for Self-supervised Graph Learning for Recommendation
If the compilation is successful, the evaluator of cpp implementation will be called automatically. Otherwise, the evaluator of python implementation will be called.
Codes for our IJCAI21 paper: Dialogue Discourse-Aware Graph Model and Data Augmentation for Meeting Summarization
DDAMS This is the pytorch code for our IJCAI 2021 paper Dialogue Discourse-Aware Graph Model and Data Augmentation for Meeting Summarization [Arxiv Pr
An Unsupervised Graph-based Toolbox for Fraud Detection
An Unsupervised Graph-based Toolbox for Fraud Detection Introduction: UGFraud is an unsupervised graph-based fraud detection toolbox that integrates s
Official source code to CVPR'20 paper, "When2com: Multi-Agent Perception via Communication Graph Grouping"
When2com: Multi-Agent Perception via Communication Graph Grouping This is the PyTorch implementation of our paper: When2com: Multi-Agent Perception vi
Expressive Power of Invariant and Equivaraint Graph Neural Networks (ICLR 2021)
Expressive Power of Invariant and Equivaraint Graph Neural Networks In this repository, we show how to use powerful GNN (2-FGNN) to solve a graph alig
[WWW 2021] Source code for "Graph Contrastive Learning with Adaptive Augmentation"
GCA Source code for Graph Contrastive Learning with Adaptive Augmentation (WWW 2021) For example, to run GCA-Degree under WikiCS, execute: python trai
A static analysis library for computing graph representations of Python programs suitable for use with graph neural networks.
python_graphs This package is for computing graph representations of Python programs for machine learning applications. It includes the following modu
Code for paper PairRE: Knowledge Graph Embeddings via Paired Relation Vectors.
PairRE Code for paper PairRE: Knowledge Graph Embeddings via Paired Relation Vectors. This implementation of PairRE for Open Graph Benchmak datasets (
Karate Club: An API Oriented Open-source Python Framework for Unsupervised Learning on Graphs (CIKM 2020)
Karate Club is an unsupervised machine learning extension library for NetworkX. Please look at the Documentation, relevant Paper, Promo Video, and Ext
SkipGNN: Predicting Molecular Interactions with Skip-Graph Networks (Scientific Reports)
SkipGNN: Predicting Molecular Interactions with Skip-Graph Networks Molecular interaction networks are powerful resources for the discovery. While dee
Generative Models for Graph-Based Protein Design
Graph-Based Protein Design This repo contains code for Generative Models for Graph-Based Protein Design by John Ingraham, Vikas Garg, Regina Barzilay
A simple image/video to Desmos graph converter run locally
Desmos Bezier Renderer A simple image/video to Desmos graph converter run locally Sample Result Setup Install dependencies apt update apt install git
A Research-oriented Federated Learning Library and Benchmark Platform for Graph Neural Networks. Accepted to ICLR'2021 - DPML and MLSys'21 - GNNSys workshops.
FedGraphNN: A Federated Learning System and Benchmark for Graph Neural Networks A Research-oriented Federated Learning Library and Benchmark Platform
Boost learning for GNNs from the graph structure under challenging heterophily settings. (NeurIPS'20)
Beyond Homophily in Graph Neural Networks: Current Limitations and Effective Designs Jiong Zhu, Yujun Yan, Lingxiao Zhao, Mark Heimann, Leman Akoglu,
Code for "Graph-Evolving Meta-Learning for Low-Resource Medical Dialogue Generation". [AAAI 2021]
Graph Evolving Meta-Learning for Low-resource Medical Dialogue Generation Code to be further cleaned... This repo contains the code of the following p
[TIP2020] Adaptive Graph Representation Learning for Video Person Re-identification
Introduction This is the PyTorch implementation for Adaptive Graph Representation Learning for Video Person Re-identification. Get started git clone h
KE-Dialogue: Injecting knowledge graph into a fully end-to-end dialogue system.
Learning Knowledge Bases with Parameters for Task-Oriented Dialogue Systems This is the implementation of the paper: Learning Knowledge Bases with Par
Official code for "End-to-End Optimization of Scene Layout" -- including VAE, Diff Render, SPADE for colorization (CVPR 2020 Oral)
End-to-End Optimization of Scene Layout Code release for: End-to-End Optimization of Scene Layout CVPR 2020 (Oral) Project site, Bibtex For help conta
PyKale is a PyTorch library for multimodal learning and transfer learning as well as deep learning and dimensionality reduction on graphs, images, texts, and videos
PyKale is a PyTorch library for multimodal learning and transfer learning as well as deep learning and dimensionality reduction on graphs, images, texts, and videos. By adopting a unified pipeline-based API design, PyKale enforces standardization and minimalism, via reusing existing resources, reducing repetitions and redundancy, and recycling learning models across areas.
Graph Neural Networks for Recommender Systems
This repository contains code to train and test GNN models for recommendation, mainly using the Deep Graph Library (DGL).
SpikeX - SpaCy Pipes for Knowledge Extraction
SpikeX is a collection of pipes ready to be plugged in a spaCy pipeline. It aims to help in building knowledge extraction tools with almost-zero effort.
Y. Zhang, Q. Yao, W. Dai, L. Chen. AutoSF: Searching Scoring Functions for Knowledge Graph Embedding. IEEE International Conference on Data Engineering (ICDE). 2020
AutoSF The code for our paper "AutoSF: Searching Scoring Functions for Knowledge Graph Embedding" and this paper has been accepted by ICDE2020. News:
Few-Shot Graph Learning for Molecular Property Prediction
Few-shot Graph Learning for Molecular Property Prediction Introduction This is the source code and dataset for the following paper: Few-shot Graph Lea
Knowledge Graph,Question Answering System,基于知识图谱和向量检索的医疗诊断问答系统
Knowledge Graph,Question Answering System,基于知识图谱和向量检索的医疗诊断问答系统
Official implementation of GraphMask as presented in our paper Interpreting Graph Neural Networks for NLP With Differentiable Edge Masking.
GraphMask This repository contains an implementation of GraphMask, the interpretability technique for graph neural networks presented in our ICLR 2021
A Python library created to assist programmers with complex mathematical functions
libmaths libmaths was created not only as a learning experience for me, but as a way to make mathematical models in seconds for Python users using mat
Scalable Graph Neural Networks for Heterogeneous Graphs
Neighbor Averaging over Relation Subgraphs (NARS) NARS is an algorithm for node classification on heterogeneous graphs, based on scalable neighbor ave
My Body is a Cage: the Role of Morphology in Graph-Based Incompatible Control
My Body is a Cage: the Role of Morphology in Graph-Based Incompatible Control
QA-GNN: Question Answering using Language Models and Knowledge Graphs
QA-GNN: Question Answering using Language Models and Knowledge Graphs This repo provides the source code & data of our paper: QA-GNN: Reasoning with L
Domain Connectivity Analysis Tools to analyze aggregate connectivity patterns across a set of domains during security investigations
DomainCAT (Domain Connectivity Analysis Tool) Domain Connectivity Analysis Tool is used to analyze aggregate connectivity patterns across a set of dom
Elliot is a comprehensive recommendation framework that analyzes the recommendation problem from the researcher's perspective.
Comprehensive and Rigorous Framework for Reproducible Recommender Systems Evaluation
peartree: A library for converting transit data into a directed graph for sketch network analysis.
peartree 🍐 🌳 peartree is a library for converting GTFS feed schedules into a representative directed network graph. The tool uses Partridge to conve
Tools for the extraction of OpenStreetMap street network data
OSMnet Tools for the extraction of OpenStreetMap (OSM) street network data. Intended to be used in tandem with Pandana and UrbanAccess libraries to ex
printstack is a Python package that adds stack trace links to the builtin print function, so that editors such as PyCharm can link you to the source of the print call.
printstack is a Python package that adds stack trace links to the builtin print function, so that editors such as PyCharm can link to the source of the print call.
PyTorch code for the paper "Curriculum Graph Co-Teaching for Multi-target Domain Adaptation" (CVPR2021)
PyTorch code for the paper "Curriculum Graph Co-Teaching for Multi-target Domain Adaptation" (CVPR2021) This repo presents PyTorch implementation of M
The implementation of the CVPR2021 paper "Structure-Aware Face Clustering on a Large-Scale Graph with 10^7 Nodes"
STAR-FC This code is the implementation for the CVPR 2021 paper "Structure-Aware Face Clustering on a Large-Scale Graph with 10^7 Nodes" 🌟 🌟 . 🎓 Re
Facial Action Unit Intensity Estimation via Semantic Correspondence Learning with Dynamic Graph Convolution
FAU Implementation of the paper: Facial Action Unit Intensity Estimation via Semantic Correspondence Learning with Dynamic Graph Convolution. Yingruo
NetworkX is a Python package for the creation, manipulation, and study of the structure, dynamics, and functions of complex networks.
NetworkX is a Python package for the creation, manipulation, and study of the structure, dynamics, and functions of complex networks.
Official implementation of Rethinking Graph Neural Architecture Search from Message-passing (CVPR2021)
Rethinking Graph Neural Architecture Search from Message-passing Intro The GNAS can automatically learn better architecture with the optimal depth of
Code for the paper "Graph Attention Tracking". (CVPR2021)
SiamGAT 1. Environment setup This code has been tested on Ubuntu 16.04, Python 3.5, Pytorch 1.2.0, CUDA 9.0. Please install related libraries before r
Code for paper "A Critical Assessment of State-of-the-Art in Entity Alignment" (https://arxiv.org/abs/2010.16314)
A Critical Assessment of State-of-the-Art in Entity Alignment This repository contains the source code for the paper A Critical Assessment of State-of
Spectral Temporal Graph Neural Network (StemGNN in short) for Multivariate Time-series Forecasting
Spectral Temporal Graph Neural Network for Multivariate Time-series Forecasting This repository is the official implementation of Spectral Temporal Gr
Scikit-learn compatible estimation of general graphical models
skggm : Gaussian graphical models using the scikit-learn API In the last decade, learning networks that encode conditional independence relationships
cuGraph - RAPIDS Graph Analytics Library
cuGraph - GPU Graph Analytics The RAPIDS cuGraph library is a collection of GPU accelerated graph algorithms that process data found in GPU DataFrames
Code for CoMatch: Semi-supervised Learning with Contrastive Graph Regularization
CoMatch: Semi-supervised Learning with Contrastive Graph Regularization (Salesforce Research) This is a PyTorch implementation of the CoMatch paper [B
Official code for the paper: Deep Graph Matching under Quadratic Constraint (CVPR 2021)
QC-DGM This is the official PyTorch implementation and models for our CVPR 2021 paper: Deep Graph Matching under Quadratic Constraint. It also contain
We have implemented shaDow-GNN as a general and powerful pipeline for graph representation learning. For more details, please find our paper titled Deep Graph Neural Networks with Shallow Subgraph Samplers, available on arXiv (https//arxiv.org/abs/2012.01380).
Deep GNN, Shallow Sampling Hanqing Zeng, Muhan Zhang, Yinglong Xia, Ajitesh Srivastava, Andrey Malevich, Rajgopal Kannan, Viktor Prasanna, Long Jin, R
Stop writing scripts to interact with your APIs. Call them as CLIs instead.
Zum Stop writing scripts to interact with your APIs. Call them as CLIs instead. Zum (German word roughly meaning "to the" or "to" depending on the con
Open Source research tool to search, browse, analyze and explore large document collections by Semantic Search Engine and Open Source Text Mining & Text Analytics platform (Integrates ETL for document processing, OCR for images & PDF, named entity recognition for persons, organizations & locations, metadata management by thesaurus & ontologies, search user interface & search apps for fulltext search, faceted search & knowledge graph)
Open Semantic Search https://opensemanticsearch.org Integrated search server, ETL framework for document processing (crawling, text extraction, text a
[CIKM 2019] Code and dataset for "Fi-GNN: Modeling Feature Interactions via Graph Neural Networks for CTR Prediction"
FiGNN for CTR prediction The code and data for our paper in CIKM2019: Fi-GNN: Modeling Feature Interactions via Graph Neural Networks for CTR Predicti
pspsps(1) is a compyuter software to call an online catgirl to the Linux terminyal.
pspsps(1): call a catgirl from the Internyet to the Linux terminyal show processes: ps show catgirls: pspsps —@[email protected] pspsps(1) is a compyute
A spherical CNN for weather forecasting
DeepSphere-Weather - Deep Learning on the sphere for weather/climate applications. The code in this repository provides a scalable and flexible framew
Implicit Graph Neural Networks
Implicit Graph Neural Networks This repository is the official PyTorch implementation of "Implicit Graph Neural Networks". Fangda Gu*, Heng Chang*, We
Learning Intents behind Interactions with Knowledge Graph for Recommendation, WWW2021
Learning Intents behind Interactions with Knowledge Graph for Recommendation This is our PyTorch implementation for the paper: Xiang Wang, Tinglin Hua
Oncall is a calendar tool designed for scheduling and managing on-call shifts. It can be used as source of dynamic ownership info for paging systems like http://iris.claims.
Oncall See admin docs for information on how to run and manage Oncall. Development setup Prerequisites Debian/Ubuntu - sudo apt-get install libsasl2-d
Functional TensorFlow Implementation of Singular Value Decomposition for paper Fast Graph Learning
tf-fsvd TensorFlow Implementation of Functional Singular Value Decomposition for paper Fast Graph Learning with Unique Optimal Solutions Cite If you f
Official implementation of Self-supervised Graph Attention Networks (SuperGAT), ICLR 2021.
SuperGAT Official implementation of Self-supervised Graph Attention Networks (SuperGAT). This model is presented at How to Find Your Friendly Neighbor
Scikit-learn compatible estimation of general graphical models
skggm : Gaussian graphical models using the scikit-learn API In the last decade, learning networks that encode conditional independence relationships
Graph Neural Networks with Keras and Tensorflow 2.
Welcome to Spektral Spektral is a Python library for graph deep learning, based on the Keras API and TensorFlow 2. The main goal of this project is to
Geometric Deep Learning Extension Library for PyTorch
Documentation | Paper | Colab Notebooks | External Resources | OGB Examples PyTorch Geometric (PyG) is a geometric deep learning extension library for
Little Ball of Fur - A graph sampling extension library for NetworKit and NetworkX (CIKM 2020)
Little Ball of Fur is a graph sampling extension library for Python. Please look at the Documentation, relevant Paper, Promo video and External Resour
Karate Club: An API Oriented Open-source Python Framework for Unsupervised Learning on Graphs (CIKM 2020)
Karate Club is an unsupervised machine learning extension library for NetworkX. Please look at the Documentation, relevant Paper, Promo Video, and Ext
EGNN - Implementation of E(n)-Equivariant Graph Neural Networks, in Pytorch
EGNN - Pytorch Implementation of E(n)-Equivariant Graph Neural Networks, in Pytorch. May be eventually used for Alphafold2 replication. This
Implementation of E(n)-Transformer, which extends the ideas of Welling's E(n)-Equivariant Graph Neural Network to attention
E(n)-Equivariant Transformer (wip) Implementation of E(n)-Equivariant Transformer, which extends the ideas from Welling's E(n)-Equivariant G
Conference planning tool: CfP, scheduling, speaker management
pretalx is a conference planning tool focused on providing the best experience for organisers, speakers, reviewers, and attendees alike. It handles th
Conference planning tool: CfP, scheduling, speaker management
pretalx is a conference planning tool focused on providing the best experience for organisers, speakers, reviewers, and attendees alike. It handles th
A Python library created to assist programmers with complex mathematical functions
libmaths was created not only as a learning experience for me, but as a way to make mathematical models in seconds for Python users using mat
This repository contains the code used for Predicting Patient Outcomes with Graph Representation Learning (https://arxiv.org/abs/2101.03940).
Predicting Patient Outcomes with Graph Representation Learning This repository contains the code used for Predicting Patient Outcomes with Graph Repre
Generate a roam research like Network Graph view from your Notion pages.
Notion Graph View Export Notion pages to a Roam Research like graph view.
A PyTorch implementation of "Pathfinder Discovery Networks for Neural Message Passing"
A PyTorch implementation of "Pathfinder Discovery Networks for Neural Message Passing" (WebConf 2021). Abstract In this work we propose Pathfind
Official PyTorch implementation of Joint Object Detection and Multi-Object Tracking with Graph Neural Networks
This is the official PyTorch implementation of our paper: "Joint Object Detection and Multi-Object Tracking with Graph Neural Networks". Our project website and video demos are here.
A command line utility for tracking a stock market portfolio. Primarily featuring high resolution braille graphs.
A command line stock market / portfolio tracker originally insipred by Ericm's Stonks program, featuring unicode for incredibly high detailed graphs even in a terminal.
Plots is a graph plotting app for GNOME.
Plots is a graph plotting app for GNOME. Plots makes it easy to visualise mathematical formulae. In addition to basic arithmetic operations, it supports trigonometric, hyperbolic, exponential and logarithmic functions, as well as arbitrary sums and products.Plots is designed to integrate well with the GNOME desktop and takes advantage of modern hardware using OpenGL, and currently supports OpenGL 3.3+.
Python implementation of TextRank for phrase extraction and summarization of text documents
PyTextRank PyTextRank is a Python implementation of TextRank as a spaCy pipeline extension, used to: extract the top-ranked phrases from text document
The interactive graphing library for Python (includes Plotly Express) :sparkles:
plotly.py Latest Release User forum PyPI Downloads License Data Science Workspaces Our recommended IDE for Plotly’s Python graphing library is Dash En
This is a Pytorch implementation of the paper: Self-Supervised Graph Transformer on Large-Scale Molecular Data.
This is a Pytorch implementation of the paper: Self-Supervised Graph Transformer on Large-Scale Molecular Data.
Python implementation of TextRank for phrase extraction and summarization of text documents
PyTextRank PyTextRank is a Python implementation of TextRank as a spaCy pipeline extension, used to: extract the top-ranked phrases from text document
The interactive graphing library for Python (includes Plotly Express) :sparkles:
plotly.py Latest Release User forum PyPI Downloads License Data Science Workspaces Our recommended IDE for Plotly’s Python graphing library is Dash En
ktrain is a Python library that makes deep learning and AI more accessible and easier to apply
Overview | Tutorials | Examples | Installation | FAQ | How to Cite Welcome to ktrain News and Announcements 2020-11-08: ktrain v0.25.x is released and
Visual profiler for Python
vprof vprof is a Python package providing rich and interactive visualizations for various Python program characteristics such as running time and memo
🚴 Call stack profiler for Python. Shows you why your code is slow!
pyinstrument Pyinstrument is a Python profiler. A profiler is a tool to help you 'optimize' your code - make it faster. It sounds obvious, but to get
:package: :fire: Python project management. Manage packages: convert between formats, lock, install, resolve, isolate, test, build graph, show outdated, audit. Manage venvs, build package, bump version.
THE PROJECT IS ARCHIVED Forks: https://github.com/orsinium/forks DepHell -- project management for Python. Why it is better than all other tools: Form
A Static Analysis Tool for Detecting Security Vulnerabilities in Python Web Applications
This project is no longer maintained March 2020 Update: Please go see the amazing Pysa tutorial that should get you up to speed finding security vulne
Neo4j Bolt driver for Python
Neo4j Bolt Driver for Python This repository contains the official Neo4j driver for Python. Each driver release (from 4.0 upwards) is built specifical
Python library for serializing any arbitrary object graph into JSON. It can take almost any Python object and turn the object into JSON. Additionally, it can reconstitute the object back into Python.
jsonpickle jsonpickle is a library for the two-way conversion of complex Python objects and JSON. jsonpickle builds upon the existing JSON encoders, s
A python module to parse the Open Graph Protocol
OpenGraph is a module of python for parsing the Open Graph Protocol, you can read more about the specification at http://ogp.me/ Installation $ pip in
Facebook open graph api implementation using the Django web framework in python
Django Facebook by Thierry Schellenbach (mellowmorning.com) Status Django and Facebook are both rapidly changing at the moment. Meanwhile, I'm caught
This is a simple graph database in SQLite, inspired by
This is a simple graph database in SQLite, inspired by "SQLite as a document database".
Graph Transformer Architecture. Source code for
Graph Transformer Architecture Source code for the paper "A Generalization of Transformer Networks to Graphs" by Vijay Prakash Dwivedi and Xavier Bres