Python Genome-scale-models Resources

JAX Models Table of Contents About The Project Getting Started Prerequisites Installation Usage Contributing License Contact About The Project The JAX

SwinMR This is the official implementation of our proposed SwinMR: Swin Transformer for Fast MRI Please cite: @article{huang2022swin, title={Swi

Emotion-EEG Set of models for emotion estimation from EEG. Composed by the combination of two deep-learing models learning together (RNN and CNN) with

Scalable Cluster-Consistency Statistics for Robust Multi-Object Matching (3DV 2021 Oral Presentation) Filtering by Cluster Consistency (FCC) is a very

1 MAGNN This repo is the official implementation for Multi-Scale Adaptive Graph Neural Network for Multivariate Time Series Forecasting. 1.1 The frame

Awesome production machine learning This repository contains a curated list of awesome open source libraries that will help you deploy, monitor, versi

Spatial unbiased GANs — Simple TensorFlow Implementation [Paper] : Toward Spatially Unbiased Generative Models (ICCV 2021) Abstract Recent image gener

MLP-Mixer-Pytorch PyTorch implementation of MLP-Mixer: An all-MLP Architecture for Vision with the function of loading official ImageNet pre-trained p

Pixel Objectness The following repository contains pretrained model for pixel objectness. Please visit our project page for the paper and visual resul

Using the provided dataset which includes various book features, in order to predict the price of books, using various proposed methods and models.

I label phrases on a scale of five values: negative, somewhat negative, neutral, somewhat positive, positive. Obstacles like sentence negation, sarcasm, terseness, language ambiguity, and many others make this task very challenging.

World Models This repo reproduces the original implementation of World Models. This implementation uses TensorFlow 2.2. Docker The easiest way to hand

Hugging Face x Stable-baselines3 A library to load and upload Stable-baselines3 models from the Hub. Installation With pip Examples [Todo: add colab t

Graph-based CTR prediction This is a repository designed for graph-based CTR prediction methods, it includes our graph-based CTR prediction methods: F

GANVAS-models This is an implementation of various generative models. It contains implementations of the following: Autoregressive Models: PixelCNN, G

Designed a greedy algorithm based on Markov sequential decision-making process in MATLAB/Python to optimize using Gurobi solver, the wheel size, gear shifting sequence by modeling drivetrain constraints to achieve maximum laps in a race with a 2-hour time window.

Trained image classification models for Keras THIS REPOSITORY IS DEPRECATED. USE THE MODULE keras.applications INSTEAD. Pull requests will not be revi

NOTE We have noticed a lot of concern that PULSE will be used to identify individuals whose faces have been blurred out. We want to emphasize that thi

A clean, easy to scale discord bot template. Develope using nextcord library and can be use with any other discord.py forked library.

Django Consistency Model DCM is a set of tools that helps you to keep your data in your Django Models consistent. Motivation You have a lot of legacy

Simple Transformer I've written a series of articles on the transformer architecture and language models on Medium. This repository contains an implem

Interpolation-reduced-order-models Interpolation-based reduced-order models High-fidelity computational fluid dynamics (CFD) solutions are time consum

Introduction This is an implementation of our paper Supervised 3D Pre-training on Large-scale 2D Natural Image Datasets for 3D Medical Image Analysis.

Cloud TPUs This repository is a collection of reference models and tools used with Cloud TPUs. The fastest way to get started training a model on a Cl

optimaladj: A library for computing optimal adjustment sets in causal graphical models This package implements the algorithms introduced in Smucler, S

City Surfaces: City-scale Semantic Segmentation of Sidewalk Surfaces Paper Temporary GitHub page for City Surfaces paper. More soon! While designing s

Large-scale protein-protein post-translational modification extraction with distant supervision and confidence calibrated BioBERT The silver standard

TSLM-DISCOURSE-MARKERS Scope This repository contains: (1) Code to extract discourse markers from wikipedia (TSA). (1) Code to extract significant dis

HuSpaCy: Industrial-strength Hungarian NLP HuSpaCy is a spaCy model and a library providing industrial-strength Hungarian language processing faciliti

Overview This Python package provides implementations of Augmented Principal Component Analysis (AugmentedPCA) - a family of linear factor models that

tisane Tisane: Authoring Statistical Models via Formal Reasoning from Conceptual and Data Relationships TL;DR: Analysts can use Tisane to author gener

JointDemandForecasting.py A framework for multi-step probabilistic time-series/demand forecasting models File stucture JointDemandForecasting contains

twitter-sentiment-analysis Explore the relationship between twitter sentiment of Tesla and its stock price/return. Explore the effect of different BER

pytorch-resnet-twitch PyTorch implementation(s) of various ResNet models from Twitch streams. Status: ResNet50 currently not working. Will update in n

A minimal yet resourceful implementation of diffusion models (along with pretrained models + synthetic images for nine datasets)

Semi Intelligent BOT The project involves : Classifying fake news Classifying objects such as aeroplane, automobile, bird, cat, deer, dog, frog, horse

clustering-laion400m Script and models for clustering LAION-400m CLIP embeddings. Models were fit on the first million or so image embeddings. A subje

3D Mesh Encoder An Executor that receives Documents containing point sets data in its blob attribute, with shape (N, 3) and encodes it to embeddings o

NLP Best Practices In recent years, natural language processing (NLP) has seen quick growth in quality and usability, and this has helped to drive bus

DeepCTR DeepCTR is a Easy-to-use,Modular and Extendible package of deep-learning based CTR models along with lots of core components layers which can

NLP-Models-Tensorflow, Gathers machine learning and tensorflow deep learning models for NLP problems, code simplify inside Jupyter Notebooks 100%. Tab

List of Implementations: Currently, the reimplementation of the DeepAR paper(DeepAR: Probabilistic Forecasting with Autoregressive Recurrent Networks

Deep learning for time series forecasting Flow forecast is an open-source deep learning for time series forecasting framework. It provides all the lat

Gordo Building thousands of models with timeseries data to monitor systems. Table of content About Examples Install Uninstall Developer manual How to

🌄 Scalecast: Dynamic Forecasting at Scale About This package uses a scaleable forecasting approach in Python with common scikit-learn and statsmodels

Cherche (search in French) allows you to create a neural search pipeline using retrievers and pre-trained language models as rankers. Cherche is meant to be used with small to medium sized corpora. Cherche's main strength is its ability to build diverse and end-to-end pipelines.

Deepchecks is a Python package for comprehensively validating your machine learning models and data with minimal effort

deepfake-models List some popular DeepFake models e.g. DeepFake, CihaNet, SimSwap, FaceSwap-MarekKowal, IPGAN, FaceShifter, FaceSwap-Nirkin, FSGAN, Si

CheckList This repository contains code for testing NLP Models as described in the following paper: Beyond Accuracy: Behavioral Testing of NLP models

🎉 What's new ? Version New Feature Description Tutorial 1.6.x Explainability Quality Metrics To help increase confidence in explainability methods, y

Deep Learning Time Series Forecasting List of state of the art papers focus on deep learning and resources, code and experiments using deep learning f

Open nsfw model This repo contains code for running Not Suitable for Work (NSFW) classification deep neural network Caffe models. Please refer our blo

Since iOS 11, Apple released Core ML framework to help developers integrate machine learning models into applications. The official documentation We'v

Scene Graph Generation Object Detections Ground truth Scene Graph Generated Scene Graph In this visualization, woman sitting on rock is a zero-shot tr

Django-Leonardo Full featured platform for fast and easy building extensible web applications. Don't waste your time searching stable solution for dai

msprime msprime is a population genetics simulator based on tskit. Msprime can simulate random ancestral histories for a sample of individuals (consis

SysIdentPy is a Python module for System Identification using NARMAX models built on top of numpy and is distributed under the 3-Clause BSD license. N

Advbox is a toolbox to generate adversarial examples that fool neural networks in PaddlePaddle、PyTorch、Caffe2、MxNet、Keras、TensorFlow and Advbox can benchmark the robustness of machine learning models. Advbox give a command line tool to generate adversarial examples with Zero-Coding.

bottom-up-attention This code implements a bottom-up attention model, based on multi-gpu training of Faster R-CNN with ResNet-101, using object and at

StarGAN: Unified Generative Adversarial Networks for Multi-Domain Image-to-Image Translation

CSDI This is the github repository for the NeurIPS 2021 paper "CSDI: Conditional Score-based Diffusion Models for Probabilistic Time Series Imputation

raylab Reinforcement learning algorithms in RLlib and PyTorch. Installation pip install raylab Quickstart Raylab provides agents and environments to b

TensorFlow Serving + Streamlit! ✨ 🖼️ Serve TensorFlow ML models with TF-Serving and then create a Streamlit UI to use them! This is a pretty simple S

Project Insight NLP as a Service Contents Introduction Features Installation Setup and Documentation Project Details Demonstration Directory Details H

NLU Training Data Crowd-sourced training data for the development and testing of Rasa NLU models. If you're interested in grabbing some data feel free

Ask Me Anything: A tool for visualising Visual Question Answering (AMA) An easy-to-use app to visualise attentions of various VQA models. Please click

Image 🖼 Classification App Boilerplate Have you been puzzled by tons of videos, blogs and other resources on the internet and don't know where and ho

📈 Automated Time Series Forecasting Background: This MVP data web app uses the Streamlit framework and Facebook's Prophet forecasting package to gene

This repository contains code which implements the Stochastic Gaussian Mixture Model (S-GMM) for event-based datasets Dependencies CMake Premake4 Blaz

Efficient Single Image Super-Resolution Using Dual Path Connections with Multiple Scale Learning This repository is for EMSRDPN introduced in the foll

Boosting RGB-D Saliency Detection by Leveraging Unlabeled RGB This repository is the official implementation of the paper. Our results comming soon in

CV Backbones including GhostNet, TinyNet, TNT (Transformer in Transformer) developed by Huawei Noah's Ark Lab. GhostNet Code TinyNet Code TNT Code Pyr

Splicing ViT Features for Semantic Appearance Transfer [Project Page] Splice is a method for semantic appearance transfer, as described in Splicing Vi

SemEval 2021 Task 5: Toxic Spans Detection: Task: Link to SemEval-2021: Task 5 Toxic Span Detection is https://competitions.codalab.org/competitions/2

Efficient Single Image Super-Resolution Using Dual Path Connections with Multiple Scale Learning This repository is for EMSRDPN introduced in the foll

N-gram models- Unsmoothed, Laplace, Deleted Interpolation

TSIT: A Simple and Versatile Framework for Image-to-Image Translation This repository provides the official PyTorch implementation for the following p

StarGAN v2 - Official PyTorch Implementation StarGAN v2: Diverse Image Synthesis for Multiple Domains Yunjey Choi*, Youngjung Uh*, Jaejun Yoo*, Jung-W

InstaGAN: Instance-aware Image-to-Image Translation Warning: This repo contains a model which has potential ethical concerns. Remark that the task of

PyTorch implementation of 'Denoising Diffusion Probabilistic Models' This reposi

LightningFSL: Few-Shot Learning with Pytorch-Lightning In this repo, a number of pytorch-lightning implementations of FSL algorithms are provided, inc

System Usability Scale Analysis Toolkit The System Usability Scale (SUS) Analysis Toolkit is a web-based python application that provides a compilatio

CorrProxies - Optimizing Machine Learning Inference Queries with Correlative Proxy Models

Train aug_clip against laion400m-embeddings found here: https://laion.ai/laion-400-open-dataset/ - note that this used the base ViT-B/32 CLIP model. S

TrainingBike Code, models and schematics I've used to interface my stationary training bike with PC. You can find more information about the project i

Hyperparameter Optimization of Machine Learning Algorithms This code provides a hyper-parameter optimization implementation for machine learning algor

Author Ibrahim Koné From-Machine-Learning-Models-To-WebAPI A collection of Machine Learning Models To Web Api which are built on open source technolog

Stock Price Prediction Using Deep Learning Univariate Time Series Predicting stock price using historical data of a company using Neural networks for

BRNet code for "Automated assessment of BI-RADS categories for ultrasound images using multi-scale neural networks with an order-constrained loss func

Scale complex AI/ML pipelines anywhere CodeFlare is a framework to simplify the integration, scaling and acceleration of complex multi-step analytics

Solar-radiation-ISB-MLOps - Flask app to predict daily radiation from the time series of Solcast from Islamabad, Pakistan.

Minimal code and simple experiments to play with Denoising Diffusion Probabilist

Easily train or fine-tune SOTA computer vision models from one training repository. SuperGradients Introduction Welcome to SuperGradients, a free open

Shunted Transformer This is the offical implementation of Shunted Self-Attention via Multi-Scale Token Aggregation by Sucheng Ren, Daquan Zhou, Shengf

USSS_ICCV19 Code for Universal Semi Supervised Semantic Segmentation accepted to ICCV 2019. Full Paper available at https://arxiv.org/abs/1811.10323.

Neural Structured Learning in TensorFlow Neural Structured Learning (NSL) is a new learning paradigm to train neural networks by leveraging structured

Visualize, analyze, and explore NLP language models. Ecco creates interactive visualizations directly in Jupyter notebooks explaining the behavior of Transformer-based language models (like GPT2, BERT, RoBERTA, T5, and T0).

Beibo is a Python library that uses several AI prediction models to predict stocks returns over a defined period of time.

Contrastive Learning of Structured World Models This repository contains the official PyTorch implementation of: Contrastive Learning of Structured Wo

Automation Kit Repository Welcome to the Automation Kit repository! Note: This package is progressing quickly but is not yet ready for full production