Python Graph-optimization Resources

Roam to Logseq The script loads a json export of a Roam graph and cleans it up f

On Evaluation Metrics for Graph Generative Models Authors: Rylee Thompson, Boris Knyazev, Elahe Ghalebi, Jungtaek Kim, Graham Taylor This is the offic

Tools for mathematical optimization region

GPU implementation of kNN and SNN GPU implementation of $k$-Nearest Neighbors and Shared-Nearest Neighbors Supported by numba cuda and faiss library E

package tests docs license stats support This repository contains FEDOT - an open-source framework for automated modeling and machine learning (AutoML

Optuna is an automatic hyperparameter optimization software framework, particularly designed for machine learning. It features an imperative, define-by-run style user API.

climin climin is a Python package for optimization, heavily biased to machine learning scenarios distributed under the BSD 3-clause license. It works

TensorDebugger (TDB) is a visual debugger for deep learning. It extends TensorFlow (Google's Deep Learning framework) with breakpoints + real-time visualization of the data flowing through the computational graph.

ECLARE ECLARE: Extreme Classification with Label Graph Correlations @InProceedings{Mittal21b, author = "Mittal, A. and Sachdeva, N. and Agrawal

GalaXC GalaXC: Graph Neural Networks with Labelwise Attention for Extreme Classification @InProceedings{Saini21, author = {Saini, D. and Jain,

必要なソフト・パッケージ Python3 Numpy JSON Matplotlib 動作確認環境 MacBook Air M1 Python 3.8.2 (arm64) Numpy 1.22.0 Matplotlib 3.5.1 JSON 2.0.9 使い方 draw_time_histgram(

Look into Palanteer and get an omniscient view of your program Palanteer is a set of lean and efficient tools to improve the quality of software, for

Qcover is an open source effort to help exploring combinatorial optimization problems in Noisy Intermediate-scale Quantum(NISQ) processor. It is devel

A computational optimization project towards the goal of gerrymandering the results of a hypothetical election in the UK.

PyGRANSO PyGRANSO: A PyTorch-enabled port of GRANSO with auto-differentiation Please check https://ncvx.org/PyGRANSO for detailed instructions (introd

GraphMLTutorialNLDL22 Tutorial NLDL22: Introduction to Graph Machine Learning, with Jupyter notebooks This tutorial takes place during the conference

Scene Graph Generation from Natural Language Supervision This repository includes the Pytorch code for our paper "Learning to Generate Scene Graph fro

SAPE Project page Paper Official implementation for the paper "SAPE: Spatially-Adaptive Progressive Encoding for Neural Optimization". Environment Cre

Pytorch Implementation of Learning Mesh-based Simulation With Graph Networks This is the unofficial implementation of the approach described in the pa

Node-level Graph Regression with Deep Gaussian Process Models Prerequests our implementation is mainly based on tensorflow 1.x and gpflow 1.x: python

FairEdit Relevent Publication FairEdit: Preserving Fairness in Graph Neural Networks through Greedy Graph Editing

TBSG: Tree-based Search Graph for Approximate Nearest Neighbor Search. TBSG is a graph-based algorithm for ANNS based on Cover Tree, which is also an

DeepKE is a knowledge extraction toolkit supporting low-resource and document-level scenarios for entity, relation and attribute extraction. We provide comprehensive documents, Google Colab tutorials, and online demo for beginners.

PEPit: Performance Estimation in Python This open source Python library provides a generic way to use PEP framework in Python. Performance estimation

Optimization-Planning-for-3D-ConvNets Code for the ICML 2021 paper: Optimization Planning for 3D ConvNets. Authors: Zhaofan Qiu, Ting Yao, Chong-Wah N

1 MAGNN This repo is the official implementation for Multi-Scale Adaptive Graph Neural Network for Multivariate Time Series Forecasting. 1.1 The frame

VisionKG: Vision Knowledge Graph Official Repository of VisionKG by Anh Le-Tuan, Trung-Kien Tran, Manh Nguyen-Duc, Jicheng Yuan, Manfred Hauswirth and

PPGNet: Learning Point-Pair Graph for Line Segment Detection PyTorch implementation of our CVPR 2019 paper: PPGNet: Learning Point-Pair Graph for Line

Dynamic Stock Industrial Classification Use graph-based analysis to re-classify stocks and experiment different re-classification methodologies to imp

Computational Design and Dynamics of Soft Systems · This is a repository that contains the source code for generating the lecture notes, handouts, exe

End-To-End Optimization of LiDAR Beam Configuration arXiv | IEEE Xplore This repository is the official implementation of the paper: End-To-End Optimi

Aircraft design optimization made fast through modern automatic differentiation. Plug-and-play analysis tools for aerodynamics, propulsion, structures, trajectory design, and much more.

Dagon - An Asynchronous Task Graph Execution Engine Dagon is a job execution sys

Simple implementation of Equivariant GNN A short implementation of E(n) Equivariant Graph Neural Networks for HOMO energy prediction. Just 50 lines of

This is the course project of AI3602: Data Mining of SJTU. Group Members include Jinghao Feng, Mingyang Jiang and Wenzhong Zheng.

Table of Contents Introduction Installation Examples Pre-trained models Quick start using colab JARVIS-ALIGNN webapp Peformances on a few datasets Use

Graph-to-3D This is the official implementation of the paper Graph-to-3d: End-to-End Generation and Manipulation of 3D Scenes Using Scene Graphs | arx

ReceptiveFieldAnalysisToolbox This is RFA-Toolbox, a simple and easy-to-use library that allows you to optimize your neural network architectures usin

Graph-based CTR prediction This is a repository designed for graph-based CTR prediction methods, it includes our graph-based CTR prediction methods: F

Designed a greedy algorithm based on Markov sequential decision-making process in MATLAB/Python to optimize using Gurobi solver, the wheel size, gear shifting sequence by modeling drivetrain constraints to achieve maximum laps in a race with a 2-hour time window.

PyPortfolioOpt has recently been published in the Journal of Open Source Software 🎉 PyPortfolioOpt is a library that implements portfolio optimizatio

Security audit Python project dependencies against security advisory databases.

GPOEO GPOEO is a micro-intrusive GPU online energy optimization framework for iterative applications. We also implement ODPP [1] as a comparison. [1]

PYGON A Graph Neural Network Tool for Recovering Dense Sub-graphs in Random Dense Graphs. Installation This code requires to install and run the graph

Intro Real-time object detection and classification. Paper: version 1, version 2. Read more about YOLO (in darknet) and download weight files here. In

GraphFPN: Graph Feature Pyramid Network for Object Detection Download graph-FPN-main.zip For training , run: python train.py For test with Graph_fpn

FlatGCN This is the official Pytorch-version code of FlatGCN (Flattened Graph Convolutional Networks for Recommendation, submitted to ICASSP2022). Req

This application aims to read all wifi passwords and visualizes the complexity in graph formation by taking into account several criteria and help you generate new random passwords.

Medical Appointments No-shows Why do 20% of patients miss their scheduled appointments? A person makes a doctor appointment, receives all the instruct

GAT - Graph Attention Network (PyTorch) 💻 + graphs + 📣 = ❤️ This repo contains a PyTorch implementation of the original GAT paper ( 🔗 Veličković et

Advisor Introduction Advisor is the hyper parameters tuning system for black box optimization. It is the open-source implementation of Google Vizier w

Skeletal-GNN Code for "Learning Skeletal Graph Neural Networks for Hard 3D Pose Estimation" ICCV'21 Various deep learning techniques have been propose

Spatio-Temporal Dynamic Inference Network for Group Activity Recognition The source codes for ICCV2021 Paper: Spatio-Temporal Dynamic Inference Networ

Scene Graph Generation Object Detections Ground truth Scene Graph Generated Scene Graph In this visualization, woman sitting on rock is a zero-shot tr

deep_nn_model_with_only_python_100%_test_accuracy deep learning model with only python and numpy with test accuracy 99 % on mnist dataset and differen

Documentation | Paper [JMLR] | Tutorials | Benchmarks | Examples DIG: Dive into Graphs is a turnkey library for graph deep learning research. Why DIG?

Introduction This is a crawler I wrote in Python using the APIs of Telethon months ago. This tool was not intended to be publicly available for a numb

d o t m o t i f Find graph motifs using intuitive notation DotMotif is a library that identifies subgraphs or motifs in a large graph. It looks like t

Machine Learning in Asset Management If you like this type of content then visit ML Quant site below: https://www.ml-quant.com/ Part One Follow this l

Multi-level Disentanglement Graph Neural Network (MD-GNN) This is a PyTorch implementation of the MD-GNN, and the code includes the following modules:

✔️ Linux ✔️ OS X ❌ Windows (#39) Welcome to graph-app-kit Turn your graph data into a secure and interactive visual graph app in 15 minutes! Why This

Design-Bench Design-Bench is a benchmarking framework for solving automatic design problems that involve choosing an input that maximizes a black-box

mask-uncertainty-in-HSI This repository contains the testing code and pre-trained models for the paper Calibrated Hyperspectral Image Reconstruction v

Fast-Partial-Ranking-MNL This repo provides a PyTorch implementation for the CopulaGNN models as described in the following paper: Fast Learning of MN

cluster-link-prediction This repository provides some of the code implemented and the data used for the work proposed in "A Cluster-Based Trip Predict

EMTAUC We provided a matlab implementation for an evolutionary multitasking AUC optimization framework (EMTAUC). In this code, SBGA is considered a ba

Data-Scrapping SEO - the project uses various data scrapping and Google autocompletes API tools to provide relevant points of different keywords so that search engines can be optimized; as this information is gathered, the marketing team can target the top keywords to get your company’s website higher on a results page.

Glyth Graph Revision for 0.01 A simple, yet versatile, package for graphing equations on a 2-dimensional text canvas List of contents: Brief Introduct

A collection of graph classification methods, covering embedding, deep learning, graph kernel and factorization papers

AutoML for Text, Image, and Tabular Data AutoGluon automates machine learning tasks enabling you to easily achieve strong predictive performance in yo

Coursera-deep-learning-specialization - Notes, programming assignments and quizzes from all courses within the Coursera Deep Learning specialization offered by deeplearning.ai: (i) Neural Networks and Deep Learning; (ii) Improving Deep Neural Networks: Hyperparameter tuning, Regularization and Optimization; (iii) Structuring Machine Learning Projects; (iv) Convolutional Neural Networks; (v) Sequence Models

Hyperparameter Optimization of Machine Learning Algorithms This code provides a hyper-parameter optimization implementation for machine learning algor

Optimizers Visualized Visualization of how different optimizers handle mathematical functions for optimization. Contents Installation Usage Functions

Scale complex AI/ML pipelines anywhere CodeFlare is a framework to simplify the integration, scaling and acceleration of complex multi-step analytics

Total number of Spanning Trees in a Graph This is a python script just written f

Hyperopt for solving CIFAR-100 with a convolutional neural network (CNN) built with Keras and TensorFlow, GPU backend This project acts as both a tuto

Strongly local p-norm-cut algorithms for semi-supervised learning and local graph clustering

Confidence-based Graph Convolutional Networks for Semi-Supervised Learning Source code for AISTATS 2019 paper: Confidence-based Graph Convolutional Ne

Neural Structured Learning in TensorFlow Neural Structured Learning (NSL) is a new learning paradigm to train neural networks by leveraging structured

Graph-based joint model with Nonignorable Missingness (GNM) This is a Keras implementation of the GNM model in paper ’Graph-Based Semi-Supervised Lear

G3NN This repo provides a pytorch implementation for the 4 instantiations of the flexible generative framework as described in the following paper: A

Graph Contrastive Learning with Augmentations PyTorch implementation for Graph Contrastive Learning with Augmentations [poster] [appendix] Yuning You*

CCGL: Contrastive Cascade Graph Learning This repo provides a reference implementation of Contrastive Cascade Graph Learning (CCGL) framework as descr

GitHub Activity Generator A script that helps you instantly generate a beautiful GitHub Contributions Graph for the last year. Before 😐 😶 😒 After ?

GCC: Graph Contrastive Coding for Graph Neural Network Pre-Training Original implementation for paper GCC: Graph Contrastive Coding for Graph Neural N

GRACE The official PyTorch implementation of deep GRAph Contrastive rEpresentation learning (GRACE). For a thorough resource collection of self-superv

GMI (Graphical Mutual Information) Graph Representation Learning via Graphical Mutual Information Maximization (Peng Z, Huang W, Luo M, et al., WWW 20

SelfGNN A PyTorch implementation of "SelfGNN: Self-supervised Graph Neural Networks without explicit negative sampling" paper, which will appear in Th

Pretraining on Dynamic Graph Neural Networks Our article is PT-DGNN and the code is modified based on GPT-GNN Requirements python 3.6 Ubuntu 18.04.5 L

DGI Deep Graph Infomax (Veličković et al., ICLR 2019): https://arxiv.org/abs/1809.10341 Overview Here we provide an implementation of Deep Graph Infom

Unsupervised Attributed Multiplex Network Embedding (DMGI) Overview Nodes in a multiplex network are connected by multiple types of relations. However

Heterogeneous-Deep-Graph-Infomax Parameter Setting: HDGI-A: Node-level dimension: 16 Attention head: 4 Semantic-level attention vector: 8 learning rat

Subg-Con Sub-graph Contrast for Scalable Self-Supervised Graph Representation Learning (Jiao et al., ICDM 2020): https://arxiv.org/abs/2009.10273 Over

Graph-InfoClust-GIC [PAKDD 2021] PAKDD'21 version Graph InfoClust: Maximizing Coarse-Grain Mutual Information in Graphs Preprint version Graph InfoClu

MC Outpost A Python server and client application that tracks player session times and server status About MC Outpost provides a session graph and ser

PyMeasure scientific package PyMeasure makes scientific measurements easy to set up and run. The package contains a repository of instrument classes a

Block Modeling-Guided Graph Convolutional Neural Networks This repository contains the demo code of the paper: Block Modeling-Guided Graph Convolution

InfoGraph: Unsupervised and Semi-supervised Graph-Level Representation Learning via Mutual Information Maximization Authors: Fan-yun Sun, Jordan Hoffm

NeoDTI NeoDTI: Neural integration of neighbor information from a heterogeneous network for discovering new drug-target interactions (Bioinformatics).

SelfTask-GNN A PyTorch implementation of "Self-supervised Learning on Graphs: Deep Insights and New Directions". [paper] In this paper, we first deepe