Python Graph-optimization Resources

Racing Line Optimization with PSO This repository contains a racing line optimization algorithm in python that uses Particle Swarm Optimization. Requi

Ohm-s-Law-Visualizer It's an application to calculate I from v and r using Ohm's Law. It can also plot a graph between V vs I. Story I'm doing my Unde

Implementing Graph Convolutional Networks and Information Retrieval Mechanisms using pure Python and NumPy

Visualization of numerical optimization algorithms

GN-Transformer AST This is the official repository for the paper "GN-Transformer: Fusing AST and Source Code information in Graph Networks". Data Prep

English | 简体中文 Latest News 2021.10.25 Paper "Docking-based Virtual Screening with Multi-Task Learning" is accepted by BIBM 2021. 2021.07.29 PaddleHeli

GemNet: Universal Directional Graph Neural Networks for Molecules Reference implementation in PyTorch of the geometric message passing neural network

TensorFlow GNN This is an early (alpha) release to get community feedback. It's under active development and we may break API compatibility in the fut

Some tentative models that incorporate label propagation to graph neural networks for graph representation learning in nodes, links or graphs.

Housegan-data-reader House-GAN++ (data-reader) Code and instructions for converting rplan dataset (raster images) to housegan++ data format. House-GAN

Graph Nets library Graph Nets is DeepMind's library for building graph networks in Tensorflow and Sonnet. Contact [email protected] for comments a

CG3 This is the repository for the AAAI 21 paper [Contrastive and Generative Graph Convolutional Networks for Graph-based Semi-Supervised Learning]. R

Time2box Implementation of [Time in a Box: Advancing Knowledge Graph Completion with Temporal Scopes].

HaloGraphNet Predict halo masses from simulations via Graph Neural Networks. Given a dark matter halo and its galaxies, creates a graph with informati

Prior-RObust Bayesian Optimization (PROBO) Introduction, TOC This repository contains Prior-RObust Bayesian Optimization (PROBO) as introduced in our

Interpreting Language Models Through Knowledge Graph Extraction Idea: How do we interpret what a language model learns at various stages of training?

Coresets via Bilevel Optimization This is the reference implementation for "Coresets via Bilevel Optimization for Continual Learning and Streaming" ht

TSCV: Time Series Cross-Validation This repository is a scikit-learn extension for time series cross-validation. It introduces gaps between the traini

Eiten - Algorithmic Investing Strategies for Everyone Eiten is an open source toolkit by Tradytics that implements various statistical and algorithmic

End of maintenance for GPyOpt Dear GPyOpt community! We would like to acknowledge the obvious. The core team of GPyOpt has moved on, and over the past

NNI Doc | 简体中文 NNI (Neural Network Intelligence) is a lightweight but powerful toolkit to help users automate Feature Engineering, Neural Architecture

CVXPY The CVXPY documentation is at cvxpy.org. We are building a CVXPY community on Discord. Join the conversation! For issues and long-form discussio

Nevergrad - A gradient-free optimization platform nevergrad is a Python 3.6+ library. It can be installed with: pip install nevergrad More installati

blackbox: A Python module for parallel optimization of expensive black-box functions What is this? A minimalistic and easy-to-use Python module that e

Neural Architecture Search Powered by Swarm Intelligence 🐜 DeepSwarm DeepSwarm is an open-source library which uses Ant Colony Optimization to tackle

Optuna: A hyperparameter optimization framework Website | Docs | Install Guide | Tutorial Optuna is an automatic hyperparameter optimization software

BBopt BBopt aims to provide the easiest hyperparameter optimization you'll ever do. Think of BBopt like Keras (back when Theano was still a thing) for

EZ-Graph EZ Graph is a GUI that allows users to make and train neural networks without writing a single line of code. Requirements python 3 pandas num

Federated Learning with Non-IID Data This is an implementation of the following paper: Yue Zhao, Meng Li, Liangzhen Lai, Naveen Suda, Damon Civin, Vik

GATER This repository contains the code for our EMNLP 2021 paper “Heterogeneous Graph Neural Networks for Keyphrase Generation”. Our implementation is

GraphWar: Arms Race in Graph Adversarial Learning NOTE: GraphWar is still in the early stages and the API will likely continue to change. 🚀 Installat

GOAT A paper using optimal transport to solve the graph matching problem. https://arxiv.org/abs/2111.05366 Repo structure .github: Files specifying ho

ResNEsts and DenseNEsts: Block-based DNN Models with Improved Representation Guarantees This repository is the official implementation of the empirica

isvd Official implementation of NeurIPS'21: Implicit SVD for Graph Representation Learning If you find this code useful, you may cite us as: @inprocee

Climate Modeling with Neural Diffusion Equation Introduction This is the repository of our accepted ICDM 2021 paper "Climate Modeling with Neural Diff

ProsePainter Create images by painting with words. ProsePainter combines direct digital painting with real-time guided machine-learning based image op

SGTL - Spectral Graph Theory Library SGTL is a python library of spectral graph theory methods. The library is still very new and so there are many fe

ICS-Visualizer is an interactive Industrial Control Systems (ICS) network graph that contains up-to-date ICS metadata (Name, company, port, user manua

Overview Metrinome is an all-purpose tool for working with code complexity metrics. It can be used as both a REPL and API, and includes: Converters to

Py2neo Py2neo is a client library and toolkit for working with Neo4j from within Python applications. The library supports both Bolt and HTTP and prov

Multi-objective constrained optimization for energy applications via tree ensembles

Cold Brew: Distilling Graph Node Representations with Incomplete or Missing Neighborhoods Introduction Graph Neural Networks (GNNs) have demonstrated

MassFormer This is the original implementation of MassFormer, a graph transformer for small molecule MS/MS prediction. Check out the preprint on arxiv

Explaining Hyperparameter Optimization via PDPs This repository gives access to an implementation of the methods presented in the paper submission “Ex

Homepage | Paper | Datasets | Leaderboard | Documentation Graph Robustness Benchmark (GRB) provides scalable, unified, modular, and reproducible evalu

Safe Policy Optimization with Local Feature (SPO-LF) This is the source-code for implementing the algorithms in the paper "Safe Policy Optimization wi

Polypharmacy - DDI - Synergy Survey The Survey Paper This repository accompanies our survey paper A Unified View of Relational Deep Learning for Polyp

GDN A tensorflow=1.13 implementation of Deconvolutional Networks on Graph Data (NeurIPS 2021) Abstract In this paper, we consider an inverse problem i

Safe Policy Optimization with Local Feature (SPO-LF) This is the source-code for implementing the algorithms in the paper "Safe Policy Optimization wi

SGMNet Implementation PyTorch implementation of SGMNet for ICCV'21 paper "Learning to Match Features with Seeded Graph Matching Network", by Hongkai C

Neural Scene Flow Prior Xueqian Li, Jhony Kaesemodel Pontes, Simon Lucey Will appear on Thirty-fifth Conference on Neural Information Processing Syste

Adversarial Attacks on Knowledge Graph Embeddings via Instance Attribution Methods This is the code repository to accompany the EMNLP 2021 paper on ad

CaGCN This repo is for source code of NeurIPS 2021 paper "Be Confident! Towards Trustworthy Graph Neural Networks via Confidence Calibration". Paper L

Polypharmacy - DDI - Synergy Survey The Survey Paper This repository accompanies our survey paper A Unified View of Relational Deep Learning for Polyp

ADGCL : Adversarial Graph Augmentation to Improve Graph Contrastive Learning Introduction This repo contains the Pytorch [1] implementation of Adversa

HPOflow - Sphinx DOC Tools for Optuna, MLflow and the integration of both. Detailed documentation with examples can be found here: Sphinx DOC Table of

Learning Graph Cellular Automata This code implements the experiments from the NeurIPS 2021 paper: "Learning Graph Cellular Automata" Daniele Grattaro

PWCLO-Net: Deep LiDAR Odometry in 3D Point Clouds Using Hierarchical Embedding Mask Optimization (CVPR 2021) This is the official implementation of PW

Graph-Refined Convolutional Network for Multimedia Recommendation with Implicit Feedback This is our Pytorch implementation for the paper: Yinwei Wei,

2021-AIAC-QQ-Browser-Hyperparameter-Optimization-Rank6

RHGN Source code for CIKM 2021 paper for Relation-aware Heterogeneous Graph for User Profiling Dependencies torch==1.6.0 torchvision==0.7.0 dgl==0.7.1

Lightweight Hyperparameter Optimization 🚀 The mle-hyperopt package provides a simple and intuitive API for hyperparameter optimization of your Machin

Cold Brew: Distilling Graph Node Representations with Incomplete or Missing Neighborhoods Introduction Graph Neural Networks (GNNs) have demonstrated

Update July 10, 2021: This repository now supports an additional symbolic optimization task: learning symbolic policies for reinforcement learning. Th

Generalized Proximal Policy Optimization with Sample Reuse This repository is the official implementation of the reinforcement learning algorithm Gene

Edge Independent Graph Models Code for the paper: "On the Power of Edge Independent Graph Models" Sudhanshu Chanpuriya, Cameron Musco, Konstantinos So

OpenBox Doc | OpenBox中文文档 OpenBox: Generalized and Efficient Blackbox Optimization System OpenBox is an efficient and generalized blackbox optimizatio

IGCN : Image-to-graph convolutional network IGCN is a learning framework for 2D/3D deformable model registration and alignment, and shape reconstructi

This repository contains source code for the paper Combining Latent Space and Structured Kernels for Bayesian Optimization over Combinatorial Spaces a

RMNA: A Neighbor Aggregation-Based Knowledge Graph Representation Learning Model Using Rule Mining Our code is based on Learning Attention-based Embed

Data and Code for paper Outlining and Filling: Hierarchical Query Graph Generation for Answering Complex Questions over Knowledge Graph is available f

DSP: Trajectory Prediction with Graph-based Dual-scale Context Fusion Introduction This is the project page of the paper Lu Zhang, Peiliang Li, Jing C

bayesmedaug: Bayesian Optimization Library for Medical Image Segmentation. bayesmedaug optimizes your data augmentation hyperparameters for medical im

Min-Max Adversarial Attacks [Paper] [arXiv] [Video] [Slide] Adversarial Attack Generation Empowered by Min-Max Optimization Jingkang Wang, Tianyun Zha

Diverse Motion Stylization (Official) This is the official Pytorch implementation of this paper. Diverse Motion Stylization for Multiple Style Domains

ROSEFusion 🌹 This project is based on our SIGGRAPH 2021 paper, ROSEFusion: Random Optimization for Online DenSE Reconstruction under Fast Camera Moti

DiscoNet: Learning Distilled Collaboration Graph for Multi-Agent Perception [NeurIPS 2021] Yiming Li, Shunli Ren, Pengxiang Wu, Siheng Chen, Chen Feng

PPO-BiHyb This is the official implementation of our NeurIPS 2021 paper "A Bi-Level Framework for Learning to Solve Combinatorial Optimization on Grap

A large-scale database for graph representation learning

UltraGCN This is our Pytorch implementation for our CIKM 2021 paper: Kelong Mao, Jieming Zhu, Xi Xiao, Biao Lu, Zhaowei Wang, Xiuqiang He. UltraGCN: A

GBK-GNN: Gated Bi-Kernel Graph Neural Networks for Modeling Both Homophily and Heterophily Abstract Graph Neural Networks (GNNs) are widely used on a

Digital Twin Mobility Profiling: A Spatio-Temporal Graph Learning Approach This is the implementation of traffic prediction code in DTMP based on PyTo

stock-graph-python Simple GUI python app to show a stocks graph performance. Made with Matplotlib and Tiingo. Tiingo API Key You will need to add your

🔥 Real-time Super Resolution enhancement (4x) with content loss and relativistic adversarial optimization 🔥

Fast and Easy-to-use Distributed Graph Learning for PyTorch Geometric

Ansible Playbook Grapher ansible-playbook-grapher is a command line tool to create a graph representing your Ansible playbook plays, tasks and roles.

Graph Regularized Residual Subspace Clustering Network for hyperspectral image clustering

Code for Coordinated Policy Optimization Webpage | Code | Paper | Talk (English) | Talk (Chinese) Hi there! This is the source code of the paper “Lear

Heterogeneous Temporal Graph Neural Network This repository contains the datasets and source code of HTGNN. run_mag.ipynb is the training and testing

Learning Graph Cellular Automata This code implements the experiments from the NeurIPS 2021 paper: "Learning Graph Cellular Automata" Daniele Grattaro

BMVC 2021 BI-GConv: Boundary-Aware Input-Dependent Graph Convolution for Biomedical Image Segmentation Necassary Dependencies: PyTorch 1.2.0 Python 3.

VACA Code repository for the paper "VACA: Designing Variational Graph Autoencoders for Interventional and Counterfactual Queries (arXiv)". The impleme

Rot-Pro : Modeling Transitivity by Projection in Knowledge Graph Embedding This repository contains the source code for the Rot-Pro model, presented a

Node Dependent Local Smoothing for Scalable Graph Learning Requirements Environments: Xeon Gold 5120 (CPU), 384GB(RAM), TITAN RTX (GPU), Ubuntu 16.04

L2ight is a closed-loop ONN on-chip learning framework to enable scalable ONN mapping and efficient in-situ learning. L2ight adopts a three-stage learning flow that first calibrates the complicated photonic circuit states under challenging physical constraints, then performs photonic core mapping via combined analytical solving and zeroth-order optimization.

SparseCard Code for approximate graph reduction techniques for cardinality-based DSFM, from paper "Approximate Decomposable Submodular Function Minimi

Implementation for On Provable Benefits of Depth in Training Graph Convolutional Networks Setup This implementation is based on PyTorch = 1.0.0. Smal

SMORE: Knowledge Graph Completion and Multi-hop Reasoning in Massive Knowledge Graphs SMORE is a a versatile framework that scales multi-hop query emb

Hierarchical User Intent Graph Network for Multimedia Recommendation This is our Pytorch implementation for the paper: Hierarchical User Intent Graph

With this package, you can generate mixed-integer linear programming (MIP) models of trained artificial neural networks (ANNs) using the rectified linear unit (ReLU) activation function. At the moment, only TensorFlow sequential models are supported. Interfaces to either the Pyomo or Gurobi modeling environments are offered.